RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 EVC2Q86UK5 1308 aa29.03■■■□□ 2.24
RNF38-205ENST00000377877 PANK3Q9H999 370 aa29.02■■■□□ 2.24
RNF38-205ENST00000377877 FAM135BQ49AJ0 1406 aa29.01■■■□□ 2.24
RNF38-205ENST00000377877 ANP32CO43423 234 aa29.01■■■□□ 2.23
RNF38-205ENST00000377877 CABP2Q9NPB3 220 aa29.01■■■□□ 2.23
RNF38-205ENST00000377877 CPS1P31327 1500 aa29.01■■■□□ 2.23
RNF38-205ENST00000377877 LMTK3Q96Q04 1460 aa28.99■■■□□ 2.23
RNF38-205ENST00000377877 PER1O15534 1290 aaPredicted RBP28.97■■■□□ 2.23
RNF38-205ENST00000377877 KCNA6P17658 529 aa28.97■■■□□ 2.23
RNF38-205ENST00000377877 CDK19Q9BWU1 502 aa28.97■■■□□ 2.23
RNF38-205ENST00000377877 GTF3C3Q9Y5Q9 886 aa28.97■■■□□ 2.23
RNF38-205ENST00000377877 MYOM1P52179 1685 aa28.96■■■□□ 2.23
RNF38-205ENST00000377877 PIK3R4Q99570 1358 aa28.96■■■□□ 2.23
RNF38-205ENST00000377877 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
RNF38-205ENST00000377877 CNGB1Q14028 1251 aaPredicted RBP28.95■■■□□ 2.22
RNF38-205ENST00000377877 PUS7Q96PZ0 661 aaKnown RBP28.95■■■□□ 2.22
RNF38-205ENST00000377877 SLC12A5Q9H2X9 1139 aa28.94■■■□□ 2.22
RNF38-205ENST00000377877 CHD2O14647 1828 aaKnown RBP28.93■■■□□ 2.22
RNF38-205ENST00000377877 TMC1Q8TDI8 760 aa28.92■■■□□ 2.22
RNF38-205ENST00000377877 XRN1Q8IZH2 1706 aaKnown RBP28.92■■■□□ 2.22
RNF38-205ENST00000377877 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.91■■■□□ 2.22
RNF38-205ENST00000377877 PRKRIP1Q9H875 184 aaPredicted RBP28.9■■■□□ 2.22
RNF38-205ENST00000377877 WASLO00401 505 aaPredicted RBP28.9■■■□□ 2.22
RNF38-205ENST00000377877 PTCH1Q13635 1447 aa28.89■■■□□ 2.21
RNF38-205ENST00000377877 CARD14Q9BXL6 1004 aa28.86■■■□□ 2.21
RNF38-205ENST00000377877 RBM33Q96EV2 1170 aaKnown RBP28.84■■■□□ 2.21
RNF38-205ENST00000377877 STRCQ7RTU9 1775 aa28.83■■■□□ 2.21
RNF38-205ENST00000377877 ATAD2Q6PL18 1390 aa28.81■■■□□ 2.2
RNF38-205ENST00000377877 KNSTRNQ9Y448 316 aa28.8■■■□□ 2.2
RNF38-205ENST00000377877 CABP1Q9NZU7 370 aa28.79■■■□□ 2.2
RNF38-205ENST00000377877 CC2D1BQ5T0F9 858 aaKnown RBP28.79■■■□□ 2.2
RNF38-205ENST00000377877 NUDT16Q96DE0 195 aaKnown RBP28.78■■■□□ 2.2
RNF38-205ENST00000377877 CCER2I3L3R5 266 aa28.77■■■□□ 2.2
RNF38-205ENST00000377877 AMER1Q5JTC6 1135 aaPredicted RBP28.77■■■□□ 2.2
RNF38-205ENST00000377877 ADGRB2O60241 1585 aa28.76■■■□□ 2.2
RNF38-205ENST00000377877 PRR36Q9H6K5 1346 aa28.76■■■□□ 2.19
RNF38-205ENST00000377877 NUTM2FA1L443 756 aa28.76■■■□□ 2.19
RNF38-205ENST00000377877 YTHDC1Q96MU7 727 aaKnown RBP28.76■■■□□ 2.19
RNF38-205ENST00000377877 CCDC184Q52MB2 194 aa28.75■■■□□ 2.19
RNF38-205ENST00000377877 ANKRD36BQ8N2N9 1353 aa28.72■■■□□ 2.19
RNF38-205ENST00000377877 NINLQ9Y2I6 1382 aa28.72■■■□□ 2.19
RNF38-205ENST00000377877 NWD1Q149M9 1564 aa28.72■■■□□ 2.19
RNF38-205ENST00000377877 CD163L1Q9NR16 1453 aa28.72■■■□□ 2.19
RNF38-205ENST00000377877 CCDC61Q9Y6R9 512 aa28.71■■■□□ 2.19
RNF38-205ENST00000377877 KTN1Q86UP2 1357 aaKnown RBP28.71■■■□□ 2.19
RNF38-205ENST00000377877 A0A1W2PP64 1363 aa28.7■■■□□ 2.19
RNF38-205ENST00000377877 PROSER2Q86WR7 435 aaPredicted RBP28.7■■■□□ 2.19
RNF38-205ENST00000377877 NSD3Q9BZ95 1437 aa28.7■■■□□ 2.18
RNF38-205ENST00000377877 STRCP1A6NGW2 1772 aa28.69■■■□□ 2.18
RNF38-205ENST00000377877 RALBP1Q15311 655 aa28.69■■■□□ 2.18
RNF38-205ENST00000377877 ATP7BP35670 1465 aa28.69■■■□□ 2.18
RNF38-205ENST00000377877 PPIP5K1Q6PFW1 1433 aa28.68■■■□□ 2.18
RNF38-205ENST00000377877 PARD3Q8TEW0 1356 aa28.68■■■□□ 2.18
RNF38-205ENST00000377877 TERF2IPQ9NYB0 399 aa28.68■■■□□ 2.18
RNF38-205ENST00000377877 NALCNQ8IZF0 1738 aa28.66■■■□□ 2.18
RNF38-205ENST00000377877 HDGFL2Q7Z4V5 671 aaPredicted RBP28.64■■■□□ 2.17
RNF38-205ENST00000377877 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
RNF38-205ENST00000377877 NPC1L1Q9UHC9 1359 aa28.63■■■□□ 2.17
RNF38-205ENST00000377877 RGPD8O14715 1765 aaPredicted RBP28.63■■■□□ 2.17
RNF38-205ENST00000377877 C14orf37Q86TY3 774 aa28.62■■■□□ 2.17
RNF38-205ENST00000377877 ADGRL3Q9HAR2 1447 aa28.62■■■□□ 2.17
RNF38-205ENST00000377877 MYBBP1AQ9BQG0 1328 aaKnown RBP28.61■■■□□ 2.17
RNF38-205ENST00000377877 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
RNF38-205ENST00000377877 CPSF1Q10570 1443 aaKnown RBP28.6■■■□□ 2.17
RNF38-205ENST00000377877 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
RNF38-205ENST00000377877 MRS2Q9HD23 443 aa28.59■■■□□ 2.17
RNF38-205ENST00000377877 ZNF335Q9H4Z2 1342 aaPredicted RBP28.58■■■□□ 2.17
RNF38-205ENST00000377877 FMN2Q9NZ56 1722 aa28.58■■■□□ 2.17
RNF38-205ENST00000377877 CGNL1Q0VF96 1302 aa28.58■■■□□ 2.17
RNF38-205ENST00000377877 TOPAZ1Q8N9V7 1692 aa28.58■■■□□ 2.16
RNF38-205ENST00000377877 PMFBP1Q8TBY8 1022 aa28.57■■■□□ 2.16
RNF38-205ENST00000377877 TMEM94Q12767 1356 aa28.57■■■□□ 2.16
RNF38-205ENST00000377877 ACEP12821 1306 aa28.56■■■□□ 2.16
RNF38-205ENST00000377877 CDC42BPGQ6DT37 1551 aa28.56■■■□□ 2.16
RNF38-205ENST00000377877 FYB1O15117 783 aa28.54■■■□□ 2.16
RNF38-205ENST00000377877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.53■■■□□ 2.16
RNF38-205ENST00000377877 PPP2R1AP30153 589 aa28.53■■■□□ 2.16
RNF38-205ENST00000377877 C19orf44Q9H6X5 657 aa28.53■■■□□ 2.16
RNF38-205ENST00000377877 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
RNF38-205ENST00000377877 ANKARQ7Z5J8 1434 aa28.52■■■□□ 2.16
RNF38-205ENST00000377877 ZNF692Q9BU19 519 aaPredicted RBP28.52■■■□□ 2.16
RNF38-205ENST00000377877 GGNBP2Q9H3C7 697 aa28.52■■■□□ 2.16
RNF38-205ENST00000377877 MORC1Q86VD1 984 aa28.51■■■□□ 2.15
RNF38-205ENST00000377877 NLRP13Q86W25 1043 aa28.51■■■□□ 2.15
RNF38-205ENST00000377877 AKAP12Q02952 1782 aa28.5■■■□□ 2.15
RNF38-205ENST00000377877 ITSN1Q15811 1721 aa28.48■■■□□ 2.15
RNF38-205ENST00000377877 BRD4O60885 1362 aaPredicted RBP28.48■■■□□ 2.15
RNF38-205ENST00000377877 TNNT2P45379 298 aaPredicted RBP28.48■■■□□ 2.15
RNF38-205ENST00000377877 EDC4Q6P2E9 1401 aaKnown RBP28.47■■■□□ 2.15
RNF38-205ENST00000377877 NGDNQ8NEJ9 315 aaKnown RBP28.47■■■□□ 2.15
RNF38-205ENST00000377877 MON2Q7Z3U7 1717 aa28.47■■■□□ 2.15
RNF38-205ENST00000377877 FAM9BQ8IZU0 186 aa28.46■■■□□ 2.15
RNF38-205ENST00000377877 XIRP1Q702N8 1843 aaKnown RBP28.45■■■□□ 2.15
RNF38-205ENST00000377877 NCOA3Q9Y6Q9 1424 aa28.45■■■□□ 2.15
RNF38-205ENST00000377877 POLR3AO14802 1390 aaPredicted RBP28.45■■■□□ 2.14
RNF38-205ENST00000377877 NSD2O96028 1365 aa28.45■■■□□ 2.14
RNF38-205ENST00000377877 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
RNF38-205ENST00000377877 ESCO1Q5FWF5 840 aa28.44■■■□□ 2.14
RNF38-205ENST00000377877 NME9Q86XW9 330 aa28.44■■■□□ 2.14
RNF38-205ENST00000377877 ZRANB1Q9UGI0 708 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms