RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 DHX29Q7Z478 1369 aaKnown RBP10.73□□□□□ -0.69
PCDH9-202ENST00000377865 LETM1O95202 739 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-202ENST00000377865 K7ELQ4 463 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-202ENST00000377865 MCM2P49736 904 aa10.73□□□□□ -0.69
PCDH9-202ENST00000377865 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
PCDH9-202ENST00000377865 ARID3AQ99856 593 aa10.73□□□□□ -0.69
PCDH9-202ENST00000377865 GPRASP1Q5JY77 1395 aa10.72□□□□□ -0.69
PCDH9-202ENST00000377865 WDR62O43379 1518 aa10.72□□□□□ -0.69
PCDH9-202ENST00000377865 FAM135AQ9P2D6 1515 aa10.72□□□□□ -0.69
PCDH9-202ENST00000377865 URB2Q14146 1524 aaKnown RBP10.72□□□□□ -0.69
PCDH9-202ENST00000377865 MTHFSP49914 203 aa10.72□□□□□ -0.69
PCDH9-202ENST00000377865 SLC4A10Q6U841 1118 aa10.72□□□□□ -0.69
PCDH9-202ENST00000377865 C20orf194Q5TEA3 1177 aa10.71□□□□□ -0.69
PCDH9-202ENST00000377865 FAM13BQ9NYF5 915 aa10.71□□□□□ -0.69
PCDH9-202ENST00000377865 NOL8Q76FK4 1167 aaKnown RBP10.71□□□□□ -0.69
PCDH9-202ENST00000377865 COG3Q96JB2 828 aa10.71□□□□□ -0.69
PCDH9-202ENST00000377865 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.69
PCDH9-202ENST00000377865 FOXD4L5Q5VV16 416 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-202ENST00000377865 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
PCDH9-202ENST00000377865 FOXD4L4Q8WXT5 416 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-202ENST00000377865 UHRF1BP1Q6BDS2 1440 aa10.71□□□□□ -0.7
PCDH9-202ENST00000377865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.71□□□□□ -0.7
PCDH9-202ENST00000377865 NAP1L2Q9ULW6 460 aaPredicted RBP10.71□□□□□ -0.7
PCDH9-202ENST00000377865 KIF3AQ9Y496 699 aa10.71□□□□□ -0.7
PCDH9-202ENST00000377865 SCAF11Q99590 1463 aaKnown RBP10.71□□□□□ -0.7
PCDH9-202ENST00000377865 ARHGEF11O15085 1522 aa10.71□□□□□ -0.7
PCDH9-202ENST00000377865 CHMP4CQ96CF2 233 aa10.71□□□□□ -0.7
PCDH9-202ENST00000377865 SAMD9Q5K651 1589 aa10.71□□□□□ -0.7
PCDH9-202ENST00000377865 ESPNB1AK53 854 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
PCDH9-202ENST00000377865 ZNF428Q96B54 188 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 SHANK2Q9UPX8 1470 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 RILPL2Q969X0 211 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 ATF7IPQ6VMQ6 1270 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 RUFY2Q8WXA3 655 aa10.7□□□□□ -0.7
PCDH9-202ENST00000377865 R3HCC1Q9Y3T6 440 aaKnown RBP10.7□□□□□ -0.7
PCDH9-202ENST00000377865 NOB1Q9ULX3 412 aaKnown RBP10.69□□□□□ -0.7
PCDH9-202ENST00000377865 ASXL1Q8IXJ9 1541 aa10.69□□□□□ -0.7
PCDH9-202ENST00000377865 GRIN2AQ12879 1464 aa10.69□□□□□ -0.7
PCDH9-202ENST00000377865 PKNOX2Q96KN3 472 aa10.69□□□□□ -0.7
PCDH9-202ENST00000377865 GPATCH8Q9UKJ3 1502 aaKnown RBP10.69□□□□□ -0.7
PCDH9-202ENST00000377865 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
PCDH9-202ENST00000377865 TSPY26PQ9H489 355 aa10.69□□□□□ -0.7
PCDH9-202ENST00000377865 DISP3Q9P2K9 1392 aa10.68□□□□□ -0.7
PCDH9-202ENST00000377865 CHD1LQ86WJ1 897 aa10.68□□□□□ -0.7
PCDH9-202ENST00000377865 DIAPH3Q9NSV4 1193 aa10.68□□□□□ -0.7
PCDH9-202ENST00000377865 ABCC11Q96J66 1382 aa10.68□□□□□ -0.7
PCDH9-202ENST00000377865 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
PCDH9-202ENST00000377865 PRAG1Q86YV5 1406 aa10.68□□□□□ -0.7
PCDH9-202ENST00000377865 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
PCDH9-202ENST00000377865 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
PCDH9-202ENST00000377865 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
PCDH9-202ENST00000377865 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
PCDH9-202ENST00000377865 RARSP54136 660 aaKnown RBP10.67□□□□□ -0.7
PCDH9-202ENST00000377865 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
PCDH9-202ENST00000377865 NUTM2DQ5VT03 806 aaPredicted RBP10.67□□□□□ -0.7
PCDH9-202ENST00000377865 UBE2Q2Q8WVN8 375 aa10.67□□□□□ -0.7
PCDH9-202ENST00000377865 C8orf34Q49A92 452 aa10.67□□□□□ -0.7
PCDH9-202ENST00000377865 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 PLPPR3Q6T4P5 718 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 RPGRIP1LQ68CZ1 1315 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 TBC1D2Q9BYX2 928 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 MINK1Q8N4C8 1332 aaPredicted RBP10.66□□□□□ -0.7
PCDH9-202ENST00000377865 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 PZPP20742 1482 aa10.66□□□□□ -0.7
PCDH9-202ENST00000377865 ZSCAN30Q86W11 494 aa10.65□□□□□ -0.7
PCDH9-202ENST00000377865 ADGRL2O95490 1459 aa10.65□□□□□ -0.7
PCDH9-202ENST00000377865 PLB1Q6P1J6 1458 aa10.65□□□□□ -0.7
PCDH9-202ENST00000377865 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
PCDH9-202ENST00000377865 SOX12O15370 315 aa10.65□□□□□ -0.7
PCDH9-202ENST00000377865 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.65□□□□□ -0.7
PCDH9-202ENST00000377865 NSD2O96028 1365 aa10.65□□□□□ -0.7
PCDH9-202ENST00000377865 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
PCDH9-202ENST00000377865 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.71
PCDH9-202ENST00000377865 SMC3Q9UQE7 1217 aa10.65□□□□□ -0.71
PCDH9-202ENST00000377865 PIK3C2GO75747 1445 aa10.64□□□□□ -0.71
PCDH9-202ENST00000377865 BLMP54132 1417 aaPredicted RBP10.64□□□□□ -0.71
PCDH9-202ENST00000377865 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
PCDH9-202ENST00000377865 ALDH1L2Q3SY69 923 aa10.64□□□□□ -0.71
PCDH9-202ENST00000377865 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
PCDH9-202ENST00000377865 PRPF40AO75400 957 aaKnown RBP10.64□□□□□ -0.71
PCDH9-202ENST00000377865 HSP90AB4PQ58FF6 505 aa10.64□□□□□ -0.71
PCDH9-202ENST00000377865 NUP153P49790 1475 aaKnown RBP10.63□□□□□ -0.71
PCDH9-202ENST00000377865 H3BQV1 296 aa10.63□□□□□ -0.71
PCDH9-202ENST00000377865 IFFO2Q5TF58 517 aa10.63□□□□□ -0.71
PCDH9-202ENST00000377865 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
PCDH9-202ENST00000377865 GGNBP2Q9H3C7 697 aa10.63□□□□□ -0.71
PCDH9-202ENST00000377865 CABP2Q9NPB3 220 aa10.63□□□□□ -0.71
PCDH9-202ENST00000377865 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
PCDH9-202ENST00000377865 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
PCDH9-202ENST00000377865 CCDC34Q96HJ3 373 aa10.63□□□□□ -0.71
PCDH9-202ENST00000377865 DUOX2Q9NRD8 1548 aa10.62□□□□□ -0.71
PCDH9-202ENST00000377865 ERC2O15083 957 aa10.62□□□□□ -0.71
PCDH9-202ENST00000377865 AMPHP49418 695 aa10.62□□□□□ -0.71
PCDH9-202ENST00000377865 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
PCDH9-202ENST00000377865 ATAD2Q6PL18 1390 aa10.62□□□□□ -0.71
PCDH9-202ENST00000377865 CLCN1P35523 988 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 1203.6 ms