RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 NGLY1Q96IV0 654 aa13.34□□□□□ -0.27
HIF3A-205ENST00000377670 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.28
HIF3A-205ENST00000377670 DHX16O60231 1041 aaKnown RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
HIF3A-205ENST00000377670 RWDD1Q9H446 243 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
HIF3A-205ENST00000377670 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 DIAPH1O60610 1272 aaKnown RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-205ENST00000377670 RIPK4P57078 832 aa13.33□□□□□ -0.28
HIF3A-205ENST00000377670 MTHFSP49914 203 aa13.32□□□□□ -0.28
HIF3A-205ENST00000377670 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
HIF3A-205ENST00000377670 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
HIF3A-205ENST00000377670 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
HIF3A-205ENST00000377670 CUL7Q14999 1698 aa13.32□□□□□ -0.28
HIF3A-205ENST00000377670 ABCC5O15440 1437 aa13.31□□□□□ -0.28
HIF3A-205ENST00000377670 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-205ENST00000377670 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
HIF3A-205ENST00000377670 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
HIF3A-205ENST00000377670 DDX54Q8TDD1 881 aaKnown RBP13.31□□□□□ -0.28
HIF3A-205ENST00000377670 GSE1Q14687 1217 aa13.3□□□□□ -0.28
HIF3A-205ENST00000377670 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
HIF3A-205ENST00000377670 TOM1O60784 492 aa13.3□□□□□ -0.28
HIF3A-205ENST00000377670 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
HIF3A-205ENST00000377670 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
HIF3A-205ENST00000377670 KIF6Q6ZMV9 814 aa13.29□□□□□ -0.28
HIF3A-205ENST00000377670 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-205ENST00000377670 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
HIF3A-205ENST00000377670 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
HIF3A-205ENST00000377670 E9PSI1 815 aa13.28□□□□□ -0.28
HIF3A-205ENST00000377670 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.28
HIF3A-205ENST00000377670 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.28
HIF3A-205ENST00000377670 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.28
HIF3A-205ENST00000377670 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.29
HIF3A-205ENST00000377670 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
HIF3A-205ENST00000377670 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-205ENST00000377670 CABP1Q9NZU7 370 aa13.27□□□□□ -0.29
HIF3A-205ENST00000377670 RIC3Q7Z5B4 369 aa13.26□□□□□ -0.29
HIF3A-205ENST00000377670 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
HIF3A-205ENST00000377670 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
HIF3A-205ENST00000377670 APPP05067 770 aa13.26□□□□□ -0.29
HIF3A-205ENST00000377670 FBXO31Q5XUX0 539 aaPredicted RBP13.26□□□□□ -0.29
HIF3A-205ENST00000377670 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
HIF3A-205ENST00000377670 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
HIF3A-205ENST00000377670 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
HIF3A-205ENST00000377670 NOL8Q76FK4 1167 aaKnown RBP13.25□□□□□ -0.29
HIF3A-205ENST00000377670 AIMP1Q12904 312 aaKnown RBP13.25□□□□□ -0.29
HIF3A-205ENST00000377670 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 CDK19Q9BWU1 502 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
HIF3A-205ENST00000377670 PDE4AP27815 886 aa13.23□□□□□ -0.29
HIF3A-205ENST00000377670 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
HIF3A-205ENST00000377670 CABP4P57796 275 aa13.23□□□□□ -0.29
HIF3A-205ENST00000377670 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
HIF3A-205ENST00000377670 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
HIF3A-205ENST00000377670 CEBPAP49715 358 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-205ENST00000377670 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-205ENST00000377670 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
HIF3A-205ENST00000377670 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-205ENST00000377670 WAPLQ7Z5K2 1190 aa13.22□□□□□ -0.29
HIF3A-205ENST00000377670 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
HIF3A-205ENST00000377670 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
HIF3A-205ENST00000377670 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
HIF3A-205ENST00000377670 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
HIF3A-205ENST00000377670 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
HIF3A-205ENST00000377670 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
HIF3A-205ENST00000377670 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
HIF3A-205ENST00000377670 CEP89Q96ST8 783 aa13.21□□□□□ -0.29
HIF3A-205ENST00000377670 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
HIF3A-205ENST00000377670 FYB1O15117 783 aa13.21□□□□□ -0.3
HIF3A-205ENST00000377670 PDE4CQ08493 712 aa13.2□□□□□ -0.3
HIF3A-205ENST00000377670 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-205ENST00000377670 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-205ENST00000377670 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
HIF3A-205ENST00000377670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
HIF3A-205ENST00000377670 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
HIF3A-205ENST00000377670 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
HIF3A-205ENST00000377670 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
HIF3A-205ENST00000377670 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-205ENST00000377670 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
HIF3A-205ENST00000377670 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-205ENST00000377670 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
HIF3A-205ENST00000377670 GOLGA6L1Q8N7Z2 621 aa13.19□□□□□ -0.3
HIF3A-205ENST00000377670 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
HIF3A-205ENST00000377670 WWC1Q8IX03 1113 aa13.19□□□□□ -0.3
HIF3A-205ENST00000377670 ADGRL1O94910 1474 aa13.19□□□□□ -0.3
HIF3A-205ENST00000377670 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
HIF3A-205ENST00000377670 KIF14Q15058 1648 aa13.18□□□□□ -0.3
HIF3A-205ENST00000377670 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
HIF3A-205ENST00000377670 IFIT2P09913 472 aaKnown RBP13.18□□□□□ -0.3
HIF3A-205ENST00000377670 TPM4P67936 248 aa13.18□□□□□ -0.3
HIF3A-205ENST00000377670 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
HIF3A-205ENST00000377670 PNISRQ8TF01 805 aaKnown RBP13.17□□□□□ -0.3
HIF3A-205ENST00000377670 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms