RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 TMEM132EQ6IEE7 984 aa15.35■□□□□ 0.05
TNFRSF9-201ENST00000377507 GLI2P10070 1586 aa15.35■□□□□ 0.05
TNFRSF9-201ENST00000377507 MORC1Q86VD1 984 aa15.34■□□□□ 0.05
TNFRSF9-201ENST00000377507 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF9-201ENST00000377507 CFAP65Q6ZU64 1925 aaKnown RBP15.34■□□□□ 0.05
TNFRSF9-201ENST00000377507 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.05
TNFRSF9-201ENST00000377507 WWC1Q8IX03 1113 aa15.33■□□□□ 0.05
TNFRSF9-201ENST00000377507 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.05
TNFRSF9-201ENST00000377507 RAPGEF3O95398 923 aa15.33■□□□□ 0.04
TNFRSF9-201ENST00000377507 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
TNFRSF9-201ENST00000377507 NSD2O96028 1365 aa15.32■□□□□ 0.04
TNFRSF9-201ENST00000377507 TULP4Q9NRJ4 1543 aa15.32■□□□□ 0.04
TNFRSF9-201ENST00000377507 EVC2Q86UK5 1308 aa15.32■□□□□ 0.04
TNFRSF9-201ENST00000377507 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
TNFRSF9-201ENST00000377507 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
TNFRSF9-201ENST00000377507 ANKRD36BQ8N2N9 1353 aa15.31■□□□□ 0.04
TNFRSF9-201ENST00000377507 CGNL1Q0VF96 1302 aa15.31■□□□□ 0.04
TNFRSF9-201ENST00000377507 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
TNFRSF9-201ENST00000377507 SLC52A1Q9NWF4 448 aa15.31■□□□□ 0.04
TNFRSF9-201ENST00000377507 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
TNFRSF9-201ENST00000377507 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
TNFRSF9-201ENST00000377507 BCAR3O75815 825 aa15.29■□□□□ 0.04
TNFRSF9-201ENST00000377507 IDI1Q13907 227 aa15.29■□□□□ 0.04
TNFRSF9-201ENST00000377507 CCDC27Q2M243 656 aa15.29■□□□□ 0.04
TNFRSF9-201ENST00000377507 SKAP1Q86WV1 359 aa15.29■□□□□ 0.04
TNFRSF9-201ENST00000377507 WDR63Q8IWG1 891 aa15.28■□□□□ 0.04
TNFRSF9-201ENST00000377507 MTHFSP49914 203 aa15.27■□□□□ 0.04
TNFRSF9-201ENST00000377507 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.03
TNFRSF9-201ENST00000377507 TCP11L2Q8N4U5 519 aa15.25■□□□□ 0.03
TNFRSF9-201ENST00000377507 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
TNFRSF9-201ENST00000377507 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
TNFRSF9-201ENST00000377507 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
TNFRSF9-201ENST00000377507 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
TNFRSF9-201ENST00000377507 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
TNFRSF9-201ENST00000377507 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 C8orf34Q49A92 452 aa15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 NUTM2DQ5VT03 806 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 DDRGK1Q96HY6 314 aa15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 AAMPQ13685 434 aa15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 NBR1Q14596 966 aa15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 PREX1Q8TCU6 1659 aa15.23■□□□□ 0.03
TNFRSF9-201ENST00000377507 PTPRMP28827 1452 aa15.22■□□□□ 0.03
TNFRSF9-201ENST00000377507 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
TNFRSF9-201ENST00000377507 DEKP35659 375 aaKnown RBP15.21■□□□□ 0.03
TNFRSF9-201ENST00000377507 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
TNFRSF9-201ENST00000377507 MED14O60244 1454 aa15.21■□□□□ 0.03
TNFRSF9-201ENST00000377507 ADGRB2O60241 1585 aa15.21■□□□□ 0.03
TNFRSF9-201ENST00000377507 A0A1W2PP64 1363 aa15.21■□□□□ 0.02
TNFRSF9-201ENST00000377507 CLTCQ00610 1675 aaKnown RBP15.2■□□□□ 0.02
TNFRSF9-201ENST00000377507 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
TNFRSF9-201ENST00000377507 IGHDP01880 384 aa15.19■□□□□ 0.02
TNFRSF9-201ENST00000377507 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
TNFRSF9-201ENST00000377507 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
TNFRSF9-201ENST00000377507 YTHDC2Q9H6S0 1430 aaKnown RBP15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 MYO5BQ9ULV0 1848 aa15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 BCL11AQ9H165 835 aa15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 COL3A1P02461 1466 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 NLRP1Q9C000 1473 aa15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 CD163L1Q9NR16 1453 aa15.18■□□□□ 0.02
TNFRSF9-201ENST00000377507 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
TNFRSF9-201ENST00000377507 PANK1Q8TE04 598 aa15.17■□□□□ 0.02
TNFRSF9-201ENST00000377507 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
TNFRSF9-201ENST00000377507 PLEKHF1Q96S99 279 aa15.16■□□□□ 0.02
TNFRSF9-201ENST00000377507 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
TNFRSF9-201ENST00000377507 COG6Q9Y2V7 657 aa15.16■□□□□ 0.02
TNFRSF9-201ENST00000377507 REREQ9P2R6 1566 aa15.16■□□□□ 0.02
TNFRSF9-201ENST00000377507 PPM1GO15355 546 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 CT47B1P0C2W7 299 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 SRPK2P78362 688 aaKnown RBP15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 TERF2IPQ9NYB0 399 aa15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 ALKQ9UM73 1620 aa15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 FYB1O15117 783 aa15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 STK26Q9P289 416 aa15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 ANKRD26Q9UPS8 1709 aa15.15■□□□□ 0.02
TNFRSF9-201ENST00000377507 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
TNFRSF9-201ENST00000377507 RGS3P49796 1198 aa15.14■□□□□ 0.01
TNFRSF9-201ENST00000377507 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
TNFRSF9-201ENST00000377507 PRAM1Q96QH2 718 aa15.14■□□□□ 0.01
TNFRSF9-201ENST00000377507 ARHGEF40Q8TER5 1519 aa15.14■□□□□ 0.01
TNFRSF9-201ENST00000377507 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
TNFRSF9-201ENST00000377507 AGLP35573 1532 aa15.13■□□□□ 0.01
TNFRSF9-201ENST00000377507 PNPLA6Q8IY17 1366 aa15.13■□□□□ 0.01
TNFRSF9-201ENST00000377507 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF9-201ENST00000377507 RLBP1P12271 317 aa15.12■□□□□ 0.01
TNFRSF9-201ENST00000377507 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF9-201ENST00000377507 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
TNFRSF9-201ENST00000377507 ZMYM3Q14202 1370 aa15.12■□□□□ 0.01
TNFRSF9-201ENST00000377507 DLC1Q96QB1 1528 aa15.12■□□□□ 0.01
TNFRSF9-201ENST00000377507 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
TNFRSF9-201ENST00000377507 POGKQ9P215 609 aa15.11■□□□□ 0.01
TNFRSF9-201ENST00000377507 IL16Q14005 1332 aa15.11■□□□□ 0.01
TNFRSF9-201ENST00000377507 MINK1Q8N4C8 1332 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF9-201ENST00000377507 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
TNFRSF9-201ENST00000377507 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
TNFRSF9-201ENST00000377507 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
TNFRSF9-201ENST00000377507 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms