RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 PRAM1Q96QH2 718 aa19.65■□□□□ 0.74
UBA1-202ENST00000377269 TMF1P82094 1093 aa19.64■□□□□ 0.74
UBA1-202ENST00000377269 WAPLQ7Z5K2 1190 aa19.64■□□□□ 0.74
UBA1-202ENST00000377269 NCKAP5LQ9HCH0 1330 aa19.64■□□□□ 0.73
UBA1-202ENST00000377269 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
UBA1-202ENST00000377269 SETD1AO15047 1707 aaKnown RBP19.63■□□□□ 0.73
UBA1-202ENST00000377269 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
UBA1-202ENST00000377269 LRPPRCP42704 1394 aaKnown RBP19.62■□□□□ 0.73
UBA1-202ENST00000377269 MED14O60244 1454 aa19.62■□□□□ 0.73
UBA1-202ENST00000377269 PLEKHH1Q9ULM0 1364 aa19.61■□□□□ 0.73
UBA1-202ENST00000377269 POGKQ9P215 609 aa19.61■□□□□ 0.73
UBA1-202ENST00000377269 TBX22Q9Y458 520 aa19.61■□□□□ 0.73
UBA1-202ENST00000377269 ABCC11Q96J66 1382 aa19.59■□□□□ 0.73
UBA1-202ENST00000377269 PTPRUQ92729 1446 aa19.59■□□□□ 0.73
UBA1-202ENST00000377269 MINK1Q8N4C8 1332 aaPredicted RBP19.59■□□□□ 0.73
UBA1-202ENST00000377269 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.72
UBA1-202ENST00000377269 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
UBA1-202ENST00000377269 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
UBA1-202ENST00000377269 ZBED9Q6R2W3 1325 aa19.57■□□□□ 0.72
UBA1-202ENST00000377269 IL27Q8NEV9 243 aa19.57■□□□□ 0.72
UBA1-202ENST00000377269 ROBO2Q9HCK4 1378 aa19.56■□□□□ 0.72
UBA1-202ENST00000377269 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
UBA1-202ENST00000377269 ZBTB47Q9UFB7 747 aaPredicted RBP19.54■□□□□ 0.72
UBA1-202ENST00000377269 LMTK3Q96Q04 1460 aa19.54■□□□□ 0.72
UBA1-202ENST00000377269 NPHP4O75161 1426 aaPredicted RBP19.54■□□□□ 0.72
UBA1-202ENST00000377269 CNGB1Q14028 1251 aaPredicted RBP19.53■□□□□ 0.72
UBA1-202ENST00000377269 QRICH2Q9H0J4 1663 aa19.53■□□□□ 0.72
UBA1-202ENST00000377269 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
UBA1-202ENST00000377269 KCNA6P17658 529 aa19.52■□□□□ 0.72
UBA1-202ENST00000377269 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
UBA1-202ENST00000377269 TECPR2O15040 1411 aa19.52■□□□□ 0.71
UBA1-202ENST00000377269 CDCA8Q53HL2 280 aa19.5■□□□□ 0.71
UBA1-202ENST00000377269 UBE2Q2Q8WVN8 375 aa19.5■□□□□ 0.71
UBA1-202ENST00000377269 DLC1Q96QB1 1528 aa19.5■□□□□ 0.71
UBA1-202ENST00000377269 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
UBA1-202ENST00000377269 EVC2Q86UK5 1308 aa19.5■□□□□ 0.71
UBA1-202ENST00000377269 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
UBA1-202ENST00000377269 CCDC184Q52MB2 194 aa19.49■□□□□ 0.71
UBA1-202ENST00000377269 PANK3Q9H999 370 aa19.49■□□□□ 0.71
UBA1-202ENST00000377269 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
UBA1-202ENST00000377269 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
UBA1-202ENST00000377269 FAM135BQ49AJ0 1406 aa19.47■□□□□ 0.71
UBA1-202ENST00000377269 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
UBA1-202ENST00000377269 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
UBA1-202ENST00000377269 DIP2AQ14689 1571 aa19.47■□□□□ 0.71
UBA1-202ENST00000377269 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
UBA1-202ENST00000377269 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
UBA1-202ENST00000377269 CPS1P31327 1500 aa19.46■□□□□ 0.71
UBA1-202ENST00000377269 USP35Q9P2H5 1018 aa19.45■□□□□ 0.7
UBA1-202ENST00000377269 PER1O15534 1290 aaPredicted RBP19.44■□□□□ 0.7
UBA1-202ENST00000377269 RNF123Q5XPI4 1314 aa19.44■□□□□ 0.7
UBA1-202ENST00000377269 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
UBA1-202ENST00000377269 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
UBA1-202ENST00000377269 KNDC1Q76NI1 1749 aa19.42■□□□□ 0.7
UBA1-202ENST00000377269 WASLO00401 505 aaPredicted RBP19.42■□□□□ 0.7
UBA1-202ENST00000377269 NUTM2FA1L443 756 aa19.42■□□□□ 0.7
UBA1-202ENST00000377269 SMG6Q86US8 1419 aaKnown RBP19.41■□□□□ 0.7
UBA1-202ENST00000377269 RTN4Q9NQC3 1192 aaKnown RBP19.41■□□□□ 0.7
UBA1-202ENST00000377269 PTCH1Q13635 1447 aa19.41■□□□□ 0.7
UBA1-202ENST00000377269 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
UBA1-202ENST00000377269 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
UBA1-202ENST00000377269 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
UBA1-202ENST00000377269 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.39■□□□□ 0.69
UBA1-202ENST00000377269 MRS2Q9HD23 443 aa19.39■□□□□ 0.69
UBA1-202ENST00000377269 MYOM1P52179 1685 aa19.38■□□□□ 0.69
UBA1-202ENST00000377269 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
UBA1-202ENST00000377269 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
UBA1-202ENST00000377269 CHD2O14647 1828 aaKnown RBP19.36■□□□□ 0.69
UBA1-202ENST00000377269 STRCQ7RTU9 1775 aa19.36■□□□□ 0.69
UBA1-202ENST00000377269 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
UBA1-202ENST00000377269 PRR36Q9H6K5 1346 aa19.36■□□□□ 0.69
UBA1-202ENST00000377269 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.35■□□□□ 0.69
UBA1-202ENST00000377269 NUDT16Q96DE0 195 aaKnown RBP19.35■□□□□ 0.69
UBA1-202ENST00000377269 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
UBA1-202ENST00000377269 KNSTRNQ9Y448 316 aa19.34■□□□□ 0.69
UBA1-202ENST00000377269 PROSER2Q86WR7 435 aaPredicted RBP19.33■□□□□ 0.68
UBA1-202ENST00000377269 NEFMP07197 916 aa19.32■□□□□ 0.68
UBA1-202ENST00000377269 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
UBA1-202ENST00000377269 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
UBA1-202ENST00000377269 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
UBA1-202ENST00000377269 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
UBA1-202ENST00000377269 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
UBA1-202ENST00000377269 ZNF335Q9H4Z2 1342 aaPredicted RBP19.3■□□□□ 0.68
UBA1-202ENST00000377269 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
UBA1-202ENST00000377269 NSD3Q9BZ95 1437 aa19.29■□□□□ 0.68
UBA1-202ENST00000377269 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
UBA1-202ENST00000377269 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
UBA1-202ENST00000377269 ATP7BP35670 1465 aa19.28■□□□□ 0.68
UBA1-202ENST00000377269 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
UBA1-202ENST00000377269 ADGRB2O60241 1585 aa19.28■□□□□ 0.68
UBA1-202ENST00000377269 NWD1Q149M9 1564 aa19.27■□□□□ 0.67
UBA1-202ENST00000377269 STRCP1A6NGW2 1772 aa19.26■□□□□ 0.67
UBA1-202ENST00000377269 KTN1Q86UP2 1357 aaKnown RBP19.26■□□□□ 0.67
UBA1-202ENST00000377269 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
UBA1-202ENST00000377269 TERF2IPQ9NYB0 399 aa19.26■□□□□ 0.67
UBA1-202ENST00000377269 TMEM94Q12767 1356 aa19.26■□□□□ 0.67
UBA1-202ENST00000377269 NINLQ9Y2I6 1382 aa19.26■□□□□ 0.67
UBA1-202ENST00000377269 ADGRL3Q9HAR2 1447 aa19.24■□□□□ 0.67
UBA1-202ENST00000377269 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
UBA1-202ENST00000377269 NALCNQ8IZF0 1738 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms