RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 BCANQ96GW7 911 aa10.84□□□□□ -0.67
SSX9-201ENST00000376909 ARHGAP23Q9P227 1491 aa10.84□□□□□ -0.67
SSX9-201ENST00000376909 CEP170BQ9Y4F5 1589 aaPredicted RBP10.84□□□□□ -0.67
SSX9-201ENST00000376909 SLIT1O75093 1534 aa10.84□□□□□ -0.67
SSX9-201ENST00000376909 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
SSX9-201ENST00000376909 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
SSX9-201ENST00000376909 WASHC2AQ641Q2 1341 aa10.83□□□□□ -0.68
SSX9-201ENST00000376909 ADGRB1O14514 1584 aa10.82□□□□□ -0.68
SSX9-201ENST00000376909 CCDC7Q96M83 1385 aa10.82□□□□□ -0.68
SSX9-201ENST00000376909 PLEKHG1Q9ULL1 1385 aa10.82□□□□□ -0.68
SSX9-201ENST00000376909 DDX10Q13206 875 aaKnown RBP10.82□□□□□ -0.68
SSX9-201ENST00000376909 TRAK1Q9UPV9 953 aa10.82□□□□□ -0.68
SSX9-201ENST00000376909 KIF7Q2M1P5 1343 aa10.82□□□□□ -0.68
SSX9-201ENST00000376909 ALKQ9UM73 1620 aa10.81□□□□□ -0.68
SSX9-201ENST00000376909 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
SSX9-201ENST00000376909 ANKLE2Q86XL3 938 aa10.81□□□□□ -0.68
SSX9-201ENST00000376909 TESK2Q96S53 571 aa10.81□□□□□ -0.68
SSX9-201ENST00000376909 IQGAP1P46940 1657 aa10.8□□□□□ -0.68
SSX9-201ENST00000376909 TMF1P82094 1093 aa10.8□□□□□ -0.68
SSX9-201ENST00000376909 MIER1Q8N108 512 aa10.8□□□□□ -0.68
SSX9-201ENST00000376909 STK26Q9P289 416 aa10.8□□□□□ -0.68
SSX9-201ENST00000376909 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
SSX9-201ENST00000376909 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
SSX9-201ENST00000376909 YTHDC2Q9H6S0 1430 aaKnown RBP10.79□□□□□ -0.68
SSX9-201ENST00000376909 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
SSX9-201ENST00000376909 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
SSX9-201ENST00000376909 ASXL1Q8IXJ9 1541 aa10.79□□□□□ -0.68
SSX9-201ENST00000376909 LRPPRCP42704 1394 aaKnown RBP10.78□□□□□ -0.68
SSX9-201ENST00000376909 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
SSX9-201ENST00000376909 TBX22Q9Y458 520 aa10.78□□□□□ -0.68
SSX9-201ENST00000376909 METP08581 1390 aa10.77□□□□□ -0.68
SSX9-201ENST00000376909 SETD1BQ9UPS6 1966 aaKnown RBP10.77□□□□□ -0.68
SSX9-201ENST00000376909 ADAMTS13Q76LX8 1427 aa10.77□□□□□ -0.68
SSX9-201ENST00000376909 CDCA8Q53HL2 280 aa10.77□□□□□ -0.69
SSX9-201ENST00000376909 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
SSX9-201ENST00000376909 ABCC11Q96J66 1382 aa10.77□□□□□ -0.69
SSX9-201ENST00000376909 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
SSX9-201ENST00000376909 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
SSX9-201ENST00000376909 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
SSX9-201ENST00000376909 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
SSX9-201ENST00000376909 POGKQ9P215 609 aa10.76□□□□□ -0.69
SSX9-201ENST00000376909 SBNO2Q9Y2G9 1366 aa10.76□□□□□ -0.69
SSX9-201ENST00000376909 MED14O60244 1454 aa10.75□□□□□ -0.69
SSX9-201ENST00000376909 SIRT1Q96EB6 747 aa10.75□□□□□ -0.69
SSX9-201ENST00000376909 PRAM1Q96QH2 718 aa10.75□□□□□ -0.69
SSX9-201ENST00000376909 CLCN6P51797 869 aa10.74□□□□□ -0.69
SSX9-201ENST00000376909 DLC1Q96QB1 1528 aa10.74□□□□□ -0.69
SSX9-201ENST00000376909 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
SSX9-201ENST00000376909 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
SSX9-201ENST00000376909 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
SSX9-201ENST00000376909 SAFB2Q14151 953 aaKnown RBP eCLIP10.73□□□□□ -0.69
SSX9-201ENST00000376909 NCKAP5LQ9HCH0 1330 aa10.73□□□□□ -0.69
SSX9-201ENST00000376909 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
SSX9-201ENST00000376909 EVC2Q86UK5 1308 aa10.72□□□□□ -0.69
SSX9-201ENST00000376909 PIK3R4Q99570 1358 aa10.72□□□□□ -0.69
SSX9-201ENST00000376909 TECPR2O15040 1411 aa10.72□□□□□ -0.69
SSX9-201ENST00000376909 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
SSX9-201ENST00000376909 FAM135BQ49AJ0 1406 aa10.71□□□□□ -0.69
SSX9-201ENST00000376909 AMOTL2Q9Y2J4 779 aa10.71□□□□□ -0.69
SSX9-201ENST00000376909 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
SSX9-201ENST00000376909 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
SSX9-201ENST00000376909 PTPRUQ92729 1446 aa10.7□□□□□ -0.7
SSX9-201ENST00000376909 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
SSX9-201ENST00000376909 ANP32CO43423 234 aa10.7□□□□□ -0.7
SSX9-201ENST00000376909 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
SSX9-201ENST00000376909 HSPA2P54652 639 aa10.7□□□□□ -0.7
SSX9-201ENST00000376909 PUS7Q96PZ0 661 aaKnown RBP10.7□□□□□ -0.7
SSX9-201ENST00000376909 ROBO2Q9HCK4 1378 aa10.69□□□□□ -0.7
SSX9-201ENST00000376909 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
SSX9-201ENST00000376909 EVX2Q03828 476 aa10.69□□□□□ -0.7
SSX9-201ENST00000376909 QRICH2Q9H0J4 1663 aa10.69□□□□□ -0.7
SSX9-201ENST00000376909 CPS1P31327 1500 aa10.68□□□□□ -0.7
SSX9-201ENST00000376909 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
SSX9-201ENST00000376909 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
SSX9-201ENST00000376909 SRPK2P78362 688 aaKnown RBP10.67□□□□□ -0.7
SSX9-201ENST00000376909 PANK3Q9H999 370 aa10.67□□□□□ -0.7
SSX9-201ENST00000376909 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
SSX9-201ENST00000376909 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
SSX9-201ENST00000376909 KCNA6P17658 529 aa10.66□□□□□ -0.7
SSX9-201ENST00000376909 CDK19Q9BWU1 502 aa10.66□□□□□ -0.7
SSX9-201ENST00000376909 TULP4Q9NRJ4 1543 aa10.66□□□□□ -0.7
SSX9-201ENST00000376909 WASLO00401 505 aaPredicted RBP10.65□□□□□ -0.7
SSX9-201ENST00000376909 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.7
SSX9-201ENST00000376909 TMC1Q8TDI8 760 aa10.65□□□□□ -0.7
SSX9-201ENST00000376909 ATAD2Q6PL18 1390 aa10.65□□□□□ -0.71
SSX9-201ENST00000376909 PER1O15534 1290 aaPredicted RBP10.63□□□□□ -0.71
SSX9-201ENST00000376909 SLC12A5Q9H2X9 1139 aa10.63□□□□□ -0.71
SSX9-201ENST00000376909 ZRANB1Q9UGI0 708 aa10.63□□□□□ -0.71
SSX9-201ENST00000376909 XRN1Q8IZH2 1706 aaKnown RBP10.63□□□□□ -0.71
SSX9-201ENST00000376909 NINLQ9Y2I6 1382 aa10.63□□□□□ -0.71
SSX9-201ENST00000376909 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
SSX9-201ENST00000376909 PRKRIP1Q9H875 184 aaPredicted RBP10.62□□□□□ -0.71
SSX9-201ENST00000376909 KNSTRNQ9Y448 316 aa10.62□□□□□ -0.71
SSX9-201ENST00000376909 CCER2I3L3R5 266 aa10.6□□□□□ -0.71
SSX9-201ENST00000376909 CNGB1Q14028 1251 aaPredicted RBP10.6□□□□□ -0.71
SSX9-201ENST00000376909 NUDT16Q96DE0 195 aaKnown RBP10.6□□□□□ -0.71
SSX9-201ENST00000376909 TERF2IPQ9NYB0 399 aa10.6□□□□□ -0.71
SSX9-201ENST00000376909 CABP1Q9NZU7 370 aa10.6□□□□□ -0.71
SSX9-201ENST00000376909 ADGRB2O60241 1585 aa10.6□□□□□ -0.71
SSX9-201ENST00000376909 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms