RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 A2ML1A8K2U0 1454 aa28.8■■■□□ 2.2
RNF39-202ENST00000376751 YTHDC2Q9H6S0 1430 aaKnown RBP28.79■■■□□ 2.2
RNF39-202ENST00000376751 ZNF521Q96K83 1311 aa28.78■■■□□ 2.2
RNF39-202ENST00000376751 CABP2Q9NPB3 220 aa28.78■■■□□ 2.2
RNF39-202ENST00000376751 SHPRHQ149N8 1683 aa28.77■■■□□ 2.2
RNF39-202ENST00000376751 ANKRD36BQ8N2N9 1353 aa28.76■■■□□ 2.2
RNF39-202ENST00000376751 CCDC146Q8IYE0 955 aa28.76■■■□□ 2.19
RNF39-202ENST00000376751 STAG3Q9UJ98 1225 aa28.75■■■□□ 2.19
RNF39-202ENST00000376751 POLR3AO14802 1390 aaPredicted RBP28.75■■■□□ 2.19
RNF39-202ENST00000376751 MORC1Q86VD1 984 aa28.75■■■□□ 2.19
RNF39-202ENST00000376751 SETD1AO15047 1707 aaKnown RBP28.73■■■□□ 2.19
RNF39-202ENST00000376751 RIMS2Q9UQ26 1411 aa28.72■■■□□ 2.19
RNF39-202ENST00000376751 PRAM1Q96QH2 718 aa28.71■■■□□ 2.19
RNF39-202ENST00000376751 CGNL1Q0VF96 1302 aa28.71■■■□□ 2.19
RNF39-202ENST00000376751 CCDC136Q96JN2 1154 aa28.71■■■□□ 2.19
RNF39-202ENST00000376751 TNNT2P45379 298 aaPredicted RBP28.7■■■□□ 2.19
RNF39-202ENST00000376751 MINK1Q8N4C8 1332 aaPredicted RBP28.69■■■□□ 2.18
RNF39-202ENST00000376751 EXOC6Q8TAG9 804 aa28.69■■■□□ 2.18
RNF39-202ENST00000376751 DUSP27Q5VZP5 1158 aa28.68■■■□□ 2.18
RNF39-202ENST00000376751 APAF1O14727 1248 aa28.67■■■□□ 2.18
RNF39-202ENST00000376751 A0A1W2PP64 1363 aa28.67■■■□□ 2.18
RNF39-202ENST00000376751 SRPK2P78362 688 aaKnown RBP28.66■■■□□ 2.18
RNF39-202ENST00000376751 POGKQ9P215 609 aa28.65■■■□□ 2.18
RNF39-202ENST00000376751 NINLQ9Y2I6 1382 aa28.65■■■□□ 2.18
RNF39-202ENST00000376751 NRXN3Q9Y4C0 1643 aa28.65■■■□□ 2.18
RNF39-202ENST00000376751 NSD2O96028 1365 aa28.64■■■□□ 2.18
RNF39-202ENST00000376751 GOLGA2Q08379 1002 aa28.64■■■□□ 2.18
RNF39-202ENST00000376751 ZMYM3Q14202 1370 aa28.64■■■□□ 2.18
RNF39-202ENST00000376751 PLIN1O60240 522 aa28.63■■■□□ 2.17
RNF39-202ENST00000376751 DLC1Q96QB1 1528 aa28.63■■■□□ 2.17
RNF39-202ENST00000376751 CD163L1Q9NR16 1453 aa28.63■■■□□ 2.17
RNF39-202ENST00000376751 ATAD2Q6PL18 1390 aa28.62■■■□□ 2.17
RNF39-202ENST00000376751 ABCC11Q96J66 1382 aa28.61■■■□□ 2.17
RNF39-202ENST00000376751 SLFN5Q08AF3 891 aa28.61■■■□□ 2.17
RNF39-202ENST00000376751 MTHFSP49914 203 aa28.59■■■□□ 2.17
RNF39-202ENST00000376751 SPINK5Q9NQ38 1064 aaPredicted RBP28.59■■■□□ 2.17
RNF39-202ENST00000376751 TRMT2AQ8IZ69 625 aaKnown RBP28.58■■■□□ 2.17
RNF39-202ENST00000376751 ANKRD26Q9UPS8 1709 aa28.57■■■□□ 2.16
RNF39-202ENST00000376751 ESF1Q9H501 851 aaKnown RBP28.56■■■□□ 2.16
RNF39-202ENST00000376751 IQSEC2Q5JU85 1478 aa28.55■■■□□ 2.16
RNF39-202ENST00000376751 CDK19Q9BWU1 502 aa28.55■■■□□ 2.16
RNF39-202ENST00000376751 DMRT2Q9Y5R5 561 aa28.55■■■□□ 2.16
RNF39-202ENST00000376751 NLRP1Q9C000 1473 aa28.54■■■□□ 2.16
RNF39-202ENST00000376751 TNRQ92752 1358 aa28.53■■■□□ 2.16
RNF39-202ENST00000376751 WAPLQ7Z5K2 1190 aa28.53■■■□□ 2.16
RNF39-202ENST00000376751 UBR1Q8IWV7 1749 aa28.51■■■□□ 2.15
RNF39-202ENST00000376751 CRBNQ96SW2 442 aa28.51■■■□□ 2.15
RNF39-202ENST00000376751 METP08581 1390 aa28.51■■■□□ 2.15
RNF39-202ENST00000376751 NGEFQ8N5V2 710 aa28.5■■■□□ 2.15
RNF39-202ENST00000376751 TERF2IPQ9NYB0 399 aa28.5■■■□□ 2.15
RNF39-202ENST00000376751 C20orf194Q5TEA3 1177 aa28.5■■■□□ 2.15
RNF39-202ENST00000376751 GGNBP2Q9H3C7 697 aa28.5■■■□□ 2.15
RNF39-202ENST00000376751 CFAP53Q96M91 514 aa28.49■■■□□ 2.15
RNF39-202ENST00000376751 NKTRP30414 1462 aaKnown RBP28.49■■■□□ 2.15
RNF39-202ENST00000376751 KIF20BQ96Q89 1820 aa28.49■■■□□ 2.15
RNF39-202ENST00000376751 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.48■■■□□ 2.15
RNF39-202ENST00000376751 MED14O60244 1454 aa28.48■■■□□ 2.15
RNF39-202ENST00000376751 RUNDC1Q96C34 613 aa28.48■■■□□ 2.15
RNF39-202ENST00000376751 E9PSI1 815 aa28.46■■■□□ 2.15
RNF39-202ENST00000376751 FYB1O15117 783 aa28.46■■■□□ 2.15
RNF39-202ENST00000376751 KNDC1Q76NI1 1749 aa28.46■■■□□ 2.15
RNF39-202ENST00000376751 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
RNF39-202ENST00000376751 CABP1Q9NZU7 370 aa28.46■■■□□ 2.15
RNF39-202ENST00000376751 COL3A1P02461 1466 aaPredicted RBP28.45■■■□□ 2.15
RNF39-202ENST00000376751 RRP7AQ9Y3A4 280 aaKnown RBP28.44■■■□□ 2.14
RNF39-202ENST00000376751 HDGFL2Q7Z4V5 671 aaPredicted RBP28.43■■■□□ 2.14
RNF39-202ENST00000376751 TCP11L2Q8N4U5 519 aa28.42■■■□□ 2.14
RNF39-202ENST00000376751 TMEM2Q9UHN6 1383 aa28.41■■■□□ 2.14
RNF39-202ENST00000376751 ATP7BP35670 1465 aa28.41■■■□□ 2.14
RNF39-202ENST00000376751 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
RNF39-202ENST00000376751 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
RNF39-202ENST00000376751 FANCIQ9NVI1 1328 aa28.4■■■□□ 2.14
RNF39-202ENST00000376751 CPS1P31327 1500 aa28.39■■■□□ 2.14
RNF39-202ENST00000376751 TECPR2O15040 1411 aa28.39■■■□□ 2.14
RNF39-202ENST00000376751 NEUROD2Q15784 382 aa28.39■■■□□ 2.13
RNF39-202ENST00000376751 TXNDC2Q86VQ3 553 aa28.37■■■□□ 2.13
RNF39-202ENST00000376751 U2AF1L5P0DN76 240 aaPredicted RBP28.37■■■□□ 2.13
RNF39-202ENST00000376751 U2AF1Q01081 240 aaKnown RBP eCLIP28.37■■■□□ 2.13
RNF39-202ENST00000376751 FAM135BQ49AJ0 1406 aa28.36■■■□□ 2.13
RNF39-202ENST00000376751 WASLO00401 505 aaPredicted RBP28.34■■■□□ 2.13
RNF39-202ENST00000376751 ADAMTS13Q76LX8 1427 aa28.34■■■□□ 2.13
RNF39-202ENST00000376751 BCAR3O75815 825 aa28.33■■■□□ 2.13
RNF39-202ENST00000376751 HDGFP51858 240 aaKnown RBP28.33■■■□□ 2.13
RNF39-202ENST00000376751 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.33■■■□□ 2.13
RNF39-202ENST00000376751 MSH5O43196 834 aa28.32■■■□□ 2.12
RNF39-202ENST00000376751 C3P01024 1663 aa28.31■■■□□ 2.12
RNF39-202ENST00000376751 PPIP5K1Q6PFW1 1433 aa28.31■■■□□ 2.12
RNF39-202ENST00000376751 CPSF1Q10570 1443 aaKnown RBP28.31■■■□□ 2.12
RNF39-202ENST00000376751 CEBPAP49715 358 aaPredicted RBP28.31■■■□□ 2.12
RNF39-202ENST00000376751 CCDC27Q2M243 656 aa28.3■■■□□ 2.12
RNF39-202ENST00000376751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.3■■■□□ 2.12
RNF39-202ENST00000376751 SIRT1Q96EB6 747 aa28.3■■■□□ 2.12
RNF39-202ENST00000376751 PNPLA6Q8IY17 1366 aa28.28■■■□□ 2.12
RNF39-202ENST00000376751 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
RNF39-202ENST00000376751 WDR63Q8IWG1 891 aa28.28■■■□□ 2.12
RNF39-202ENST00000376751 ROBO2Q9HCK4 1378 aa28.28■■■□□ 2.12
RNF39-202ENST00000376751 LTKP29376 864 aa28.28■■■□□ 2.12
RNF39-202ENST00000376751 U2SURPO15042 1029 aaKnown RBP28.27■■■□□ 2.12
RNF39-202ENST00000376751 PLEKHF1Q96S99 279 aa28.27■■■□□ 2.12
RNF39-202ENST00000376751 MON2Q7Z3U7 1717 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms