RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 WWC1Q8IX03 1113 aa14.11□□□□□ -0.15
HDAC6-203ENST00000376619 ZKSCAN2Q63HK3 967 aa14.1□□□□□ -0.15
HDAC6-203ENST00000376619 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
HDAC6-203ENST00000376619 DHX29Q7Z478 1369 aaKnown RBP14.1□□□□□ -0.15
HDAC6-203ENST00000376619 NSD3Q9BZ95 1437 aa14.1□□□□□ -0.15
HDAC6-203ENST00000376619 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-203ENST00000376619 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
HDAC6-203ENST00000376619 NOS1P29475 1434 aa14.1□□□□□ -0.15
HDAC6-203ENST00000376619 TCOF1Q13428 1488 aaKnown RBP14.1□□□□□ -0.15
HDAC6-203ENST00000376619 NEO1Q92859 1461 aa14.1□□□□□ -0.15
HDAC6-203ENST00000376619 COL17A1Q9UMD9 1497 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-203ENST00000376619 EIF2S2P20042 333 aaKnown RBP14.09□□□□□ -0.15
HDAC6-203ENST00000376619 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
HDAC6-203ENST00000376619 FOXD4L5Q5VV16 416 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-203ENST00000376619 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
HDAC6-203ENST00000376619 FOXD4L4Q8WXT5 416 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-203ENST00000376619 IPO8O15397 1037 aaKnown RBP14.08□□□□□ -0.15
HDAC6-203ENST00000376619 SMG6Q86US8 1419 aaKnown RBP14.08□□□□□ -0.16
HDAC6-203ENST00000376619 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-203ENST00000376619 CCDC9Q9Y3X0 531 aaKnown RBP14.08□□□□□ -0.16
HDAC6-203ENST00000376619 EMILIN1Q9Y6C2 1016 aa14.08□□□□□ -0.16
HDAC6-203ENST00000376619 FAM161AQ3B820 660 aa14.08□□□□□ -0.16
HDAC6-203ENST00000376619 NME9Q86XW9 330 aa14.08□□□□□ -0.16
HDAC6-203ENST00000376619 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
HDAC6-203ENST00000376619 HSP90AB1P08238 724 aaKnown RBP14.07□□□□□ -0.16
HDAC6-203ENST00000376619 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
HDAC6-203ENST00000376619 FOXD4L6Q3SYB3 417 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-203ENST00000376619 FOXD4L3Q6VB84 417 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-203ENST00000376619 SLFN5Q08AF3 891 aa14.06□□□□□ -0.16
HDAC6-203ENST00000376619 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
HDAC6-203ENST00000376619 NLRP6P59044 892 aa14.05□□□□□ -0.16
HDAC6-203ENST00000376619 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
HDAC6-203ENST00000376619 CSB-PGBD3P0DP91 1061 aa14.05□□□□□ -0.16
HDAC6-203ENST00000376619 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
HDAC6-203ENST00000376619 PRAG1Q86YV5 1406 aa14.04□□□□□ -0.16
HDAC6-203ENST00000376619 FAM135AQ9P2D6 1515 aa14.04□□□□□ -0.16
HDAC6-203ENST00000376619 FAM83GA6ND36 823 aa14.03□□□□□ -0.16
HDAC6-203ENST00000376619 BACH2Q9BYV9 841 aa14.02□□□□□ -0.17
HDAC6-203ENST00000376619 A2MP01023 1474 aa14.02□□□□□ -0.17
HDAC6-203ENST00000376619 MS4A1P11836 297 aa14.02□□□□□ -0.17
HDAC6-203ENST00000376619 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
HDAC6-203ENST00000376619 ATP10AO60312 1499 aa14.01□□□□□ -0.17
HDAC6-203ENST00000376619 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
HDAC6-203ENST00000376619 PLEKHH1Q9ULM0 1364 aa14.01□□□□□ -0.17
HDAC6-203ENST00000376619 IGHDP01880 384 aa14.01□□□□□ -0.17
HDAC6-203ENST00000376619 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
HDAC6-203ENST00000376619 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
HDAC6-203ENST00000376619 MCM10Q7L590 875 aa14□□□□□ -0.17
HDAC6-203ENST00000376619 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
HDAC6-203ENST00000376619 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
HDAC6-203ENST00000376619 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
HDAC6-203ENST00000376619 SSH1Q8WYL5 1049 aa13.99□□□□□ -0.17
HDAC6-203ENST00000376619 C14orf93Q9H972 538 aaKnown RBP13.99□□□□□ -0.17
HDAC6-203ENST00000376619 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
HDAC6-203ENST00000376619 NUDT16Q96DE0 195 aaKnown RBP13.98□□□□□ -0.17
HDAC6-203ENST00000376619 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-203ENST00000376619 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
HDAC6-203ENST00000376619 ABTB2Q8N961 1025 aa13.97□□□□□ -0.17
HDAC6-203ENST00000376619 SPATA31E1Q6ZUB1 1445 aa13.97□□□□□ -0.17
HDAC6-203ENST00000376619 ARHGEF12Q9NZN5 1544 aa13.97□□□□□ -0.17
HDAC6-203ENST00000376619 PSME1Q06323 249 aa13.97□□□□□ -0.17
HDAC6-203ENST00000376619 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
HDAC6-203ENST00000376619 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
HDAC6-203ENST00000376619 DNMT1P26358 1616 aaKnown RBP13.96□□□□□ -0.17
HDAC6-203ENST00000376619 FKBP5Q13451 457 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-203ENST00000376619 RILPL2Q969X0 211 aa13.96□□□□□ -0.17
HDAC6-203ENST00000376619 ABCA9Q8IUA7 1624 aa13.96□□□□□ -0.17
HDAC6-203ENST00000376619 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.17
HDAC6-203ENST00000376619 USP35Q9P2H5 1018 aa13.96□□□□□ -0.17
HDAC6-203ENST00000376619 RALGAPBQ86X10 1494 aa13.96□□□□□ -0.18
HDAC6-203ENST00000376619 FRAT2O75474 233 aaPredicted RBP13.96□□□□□ -0.18
HDAC6-203ENST00000376619 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.18
HDAC6-203ENST00000376619 ZMYM3Q14202 1370 aa13.96□□□□□ -0.18
HDAC6-203ENST00000376619 FYB1O15117 783 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 RLBP1P12271 317 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 ESCO1Q5FWF5 840 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 NAP1L2Q9ULW6 460 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-203ENST00000376619 KCNJ4P48050 445 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 KRT24Q2M2I5 525 aa13.95□□□□□ -0.18
HDAC6-203ENST00000376619 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-203ENST00000376619 ANKLE2Q86XL3 938 aa13.94□□□□□ -0.18
HDAC6-203ENST00000376619 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-203ENST00000376619 MBD5Q9P267 1494 aa13.94□□□□□ -0.18
HDAC6-203ENST00000376619 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
HDAC6-203ENST00000376619 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
HDAC6-203ENST00000376619 DDX19BQ9UMR2 479 aa13.94□□□□□ -0.18
HDAC6-203ENST00000376619 CHMP3Q9Y3E7 222 aa13.93□□□□□ -0.18
HDAC6-203ENST00000376619 PARD3Q8TEW0 1356 aa13.93□□□□□ -0.18
HDAC6-203ENST00000376619 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
HDAC6-203ENST00000376619 ATP7AQ04656 1500 aa13.93□□□□□ -0.18
HDAC6-203ENST00000376619 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
HDAC6-203ENST00000376619 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
HDAC6-203ENST00000376619 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
HDAC6-203ENST00000376619 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
HDAC6-203ENST00000376619 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
HDAC6-203ENST00000376619 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
HDAC6-203ENST00000376619 GLI2P10070 1586 aa13.92□□□□□ -0.18
HDAC6-203ENST00000376619 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms