RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ADAMTS2O95450 1211 aa22.32■■□□□ 1.16
CLCN6-204ENST00000376491 ANKRD30BQ9BXX2 1392 aa22.32■■□□□ 1.16
CLCN6-204ENST00000376491 WAPLQ7Z5K2 1190 aa22.31■■□□□ 1.16
CLCN6-204ENST00000376491 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
CLCN6-204ENST00000376491 STK26Q9P289 416 aa22.31■■□□□ 1.16
CLCN6-204ENST00000376491 TECPR2O15040 1411 aa22.31■■□□□ 1.16
CLCN6-204ENST00000376491 LRPPRCP42704 1394 aaKnown RBP22.3■■□□□ 1.16
CLCN6-204ENST00000376491 TMEM132EQ6IEE7 984 aa22.3■■□□□ 1.16
CLCN6-204ENST00000376491 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
CLCN6-204ENST00000376491 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
CLCN6-204ENST00000376491 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
CLCN6-204ENST00000376491 PLEKHH1Q9ULM0 1364 aa22.28■■□□□ 1.16
CLCN6-204ENST00000376491 NGLY1Q96IV0 654 aa22.28■■□□□ 1.16
CLCN6-204ENST00000376491 COL22A1Q8NFW1 1626 aaPredicted RBP22.28■■□□□ 1.16
CLCN6-204ENST00000376491 ABCC11Q96J66 1382 aa22.27■■□□□ 1.16
CLCN6-204ENST00000376491 RGS12O14924 1447 aa22.27■■□□□ 1.16
CLCN6-204ENST00000376491 RBM6P78332 1123 aaKnown RBP22.27■■□□□ 1.16
CLCN6-204ENST00000376491 PXDNQ92626 1479 aa22.25■■□□□ 1.15
CLCN6-204ENST00000376491 NPHP3Q7Z494 1330 aa22.25■■□□□ 1.15
CLCN6-204ENST00000376491 NUTM2FA1L443 756 aa22.24■■□□□ 1.15
CLCN6-204ENST00000376491 FOXO3O43524 673 aa22.24■■□□□ 1.15
CLCN6-204ENST00000376491 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
CLCN6-204ENST00000376491 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
CLCN6-204ENST00000376491 FMN2Q9NZ56 1722 aa22.22■■□□□ 1.15
CLCN6-204ENST00000376491 MYOM2P54296 1465 aa22.22■■□□□ 1.15
CLCN6-204ENST00000376491 FNBP4Q8N3X1 1017 aaPredicted RBP22.21■■□□□ 1.15
CLCN6-204ENST00000376491 C14orf93Q9H972 538 aaKnown RBP22.21■■□□□ 1.15
CLCN6-204ENST00000376491 USP21Q9UK80 565 aa22.21■■□□□ 1.15
CLCN6-204ENST00000376491 NRXN1Q9ULB1 1477 aa22.2■■□□□ 1.14
CLCN6-204ENST00000376491 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
CLCN6-204ENST00000376491 RGPD8O14715 1765 aaPredicted RBP22.18■■□□□ 1.14
CLCN6-204ENST00000376491 CFAP70Q5T0N1 1121 aa22.18■■□□□ 1.14
CLCN6-204ENST00000376491 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
CLCN6-204ENST00000376491 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
CLCN6-204ENST00000376491 TRPC5Q9UL62 973 aaPredicted RBP22.17■■□□□ 1.14
CLCN6-204ENST00000376491 ATRNO75882 1429 aa22.16■■□□□ 1.14
CLCN6-204ENST00000376491 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
CLCN6-204ENST00000376491 KIF1AQ12756 1690 aa22.14■■□□□ 1.14
CLCN6-204ENST00000376491 BCL9LQ86UU0 1499 aa22.14■■□□□ 1.13
CLCN6-204ENST00000376491 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
CLCN6-204ENST00000376491 SPATA31A3Q5VYP0 1347 aa22.12■■□□□ 1.13
CLCN6-204ENST00000376491 KRT28Q7Z3Y7 464 aa22.1■■□□□ 1.13
CLCN6-204ENST00000376491 SAFB2Q14151 953 aaKnown RBP eCLIP22.09■■□□□ 1.13
CLCN6-204ENST00000376491 PRAM1Q96QH2 718 aa22.09■■□□□ 1.13
CLCN6-204ENST00000376491 PHF8Q9UPP1 1060 aa22.08■■□□□ 1.13
CLCN6-204ENST00000376491 ATAD2Q6PL18 1390 aa22.07■■□□□ 1.12
CLCN6-204ENST00000376491 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
CLCN6-204ENST00000376491 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
CLCN6-204ENST00000376491 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.06■■□□□ 1.12
CLCN6-204ENST00000376491 GJD4Q96KN9 370 aaPredicted RBP22.05■■□□□ 1.12
CLCN6-204ENST00000376491 USP32Q8NFA0 1604 aa22.05■■□□□ 1.12
CLCN6-204ENST00000376491 SLIT2O94813 1529 aa22.05■■□□□ 1.12
CLCN6-204ENST00000376491 TNS3Q68CZ2 1445 aa22.03■■□□□ 1.12
CLCN6-204ENST00000376491 UNC5CLQ8IV45 518 aa22.02■■□□□ 1.12
CLCN6-204ENST00000376491 POGKQ9P215 609 aa22.02■■□□□ 1.12
CLCN6-204ENST00000376491 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
CLCN6-204ENST00000376491 GLI3P10071 1580 aa22.01■■□□□ 1.11
CLCN6-204ENST00000376491 PSME1Q06323 249 aa22.01■■□□□ 1.11
CLCN6-204ENST00000376491 CABLES1Q8TDN4 633 aa22.01■■□□□ 1.11
CLCN6-204ENST00000376491 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
CLCN6-204ENST00000376491 SBNO1A3KN83 1393 aa22■■□□□ 1.11
CLCN6-204ENST00000376491 TRAK1Q9UPV9 953 aa22■■□□□ 1.11
CLCN6-204ENST00000376491 ANKARQ7Z5J8 1434 aa21.99■■□□□ 1.11
CLCN6-204ENST00000376491 PMFBP1Q8TBY8 1022 aa21.99■■□□□ 1.11
CLCN6-204ENST00000376491 ABCA3Q99758 1704 aa21.99■■□□□ 1.11
CLCN6-204ENST00000376491 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
CLCN6-204ENST00000376491 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
CLCN6-204ENST00000376491 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
CLCN6-204ENST00000376491 PLEKHG5O94827 1062 aa21.97■■□□□ 1.11
CLCN6-204ENST00000376491 TRPM3Q9HCF6 1732 aaPredicted RBP21.96■■□□□ 1.11
CLCN6-204ENST00000376491 MINK1Q8N4C8 1332 aaPredicted RBP21.96■■□□□ 1.11
CLCN6-204ENST00000376491 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
CLCN6-204ENST00000376491 EP400Q96L91 3159 aa21.96■■□□□ 1.11
CLCN6-204ENST00000376491 PLCH1Q4KWH8 1693 aa21.95■■□□□ 1.1
CLCN6-204ENST00000376491 BRWD3Q6RI45 1802 aa21.95■■□□□ 1.1
CLCN6-204ENST00000376491 HAP1P54257 671 aaPredicted RBP21.95■■□□□ 1.1
CLCN6-204ENST00000376491 LMOD2Q6P5Q4 547 aa21.95■■□□□ 1.1
CLCN6-204ENST00000376491 HRCP23327 699 aa21.94■■□□□ 1.1
CLCN6-204ENST00000376491 ARHGEF10O15013 1369 aa21.94■■□□□ 1.1
CLCN6-204ENST00000376491 NWD2Q9ULI1 1742 aa21.94■■□□□ 1.1
CLCN6-204ENST00000376491 ALS2Q96Q42 1657 aa21.91■■□□□ 1.1
CLCN6-204ENST00000376491 TULP4Q9NRJ4 1543 aa21.91■■□□□ 1.1
CLCN6-204ENST00000376491 WASLO00401 505 aaPredicted RBP21.91■■□□□ 1.1
CLCN6-204ENST00000376491 VPS72Q15906 364 aa21.91■■□□□ 1.1
CLCN6-204ENST00000376491 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
CLCN6-204ENST00000376491 ARHGEF28Q8N1W1 1705 aaKnown RBP21.9■■□□□ 1.1
CLCN6-204ENST00000376491 FAM83GA6ND36 823 aa21.9■■□□□ 1.1
CLCN6-204ENST00000376491 CCDC125Q86Z20 511 aa21.9■■□□□ 1.1
CLCN6-204ENST00000376491 EIF3AQ14152 1382 aaKnown RBP21.88■■□□□ 1.09
CLCN6-204ENST00000376491 SEPT12Q8IYM1 358 aa21.88■■□□□ 1.09
CLCN6-204ENST00000376491 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
CLCN6-204ENST00000376491 NRAPQ86VF7 1730 aa21.86■■□□□ 1.09
CLCN6-204ENST00000376491 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
CLCN6-204ENST00000376491 CCDC9Q9Y3X0 531 aaKnown RBP21.85■■□□□ 1.09
CLCN6-204ENST00000376491 CRYBG1Q9Y4K1 1723 aa21.85■■□□□ 1.09
CLCN6-204ENST00000376491 BLMP54132 1417 aaPredicted RBP21.83■■□□□ 1.09
CLCN6-204ENST00000376491 NGDNQ8NEJ9 315 aaKnown RBP21.83■■□□□ 1.09
CLCN6-204ENST00000376491 ZRANB1Q9UGI0 708 aa21.83■■□□□ 1.09
CLCN6-204ENST00000376491 ATP7BP35670 1465 aa21.83■■□□□ 1.08
CLCN6-204ENST00000376491 COL14A1Q05707 1796 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms