RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.91■■■□□ 2.54
XPA-201ENST00000375128 ADGRL3Q9HAR2 1447 aa30.91■■■□□ 2.54
XPA-201ENST00000375128 TOM1O60784 492 aa30.9■■■□□ 2.54
XPA-201ENST00000375128 ATF3P18847 181 aa30.89■■■□□ 2.53
XPA-201ENST00000375128 CADPS2Q86UW7 1296 aa30.85■■■□□ 2.53
XPA-201ENST00000375128 MINK1Q8N4C8 1332 aaPredicted RBP30.84■■■□□ 2.53
XPA-201ENST00000375128 CENPJQ9HC77 1338 aaPredicted RBP30.83■■■□□ 2.53
XPA-201ENST00000375128 EIF3AQ14152 1382 aaKnown RBP30.83■■■□□ 2.53
XPA-201ENST00000375128 HIRIP3Q9BW71 556 aaPredicted RBP30.81■■■□□ 2.52
XPA-201ENST00000375128 SCAF1Q9H7N4 1312 aaKnown RBP30.81■■■□□ 2.52
XPA-201ENST00000375128 DCCP43146 1447 aa30.81■■■□□ 2.52
XPA-201ENST00000375128 PIP4K2BP78356 416 aa30.81■■■□□ 2.52
XPA-201ENST00000375128 FBXO41Q8TF61 875 aa30.79■■■□□ 2.52
XPA-201ENST00000375128 SLAIN2Q9P270 581 aa30.79■■■□□ 2.52
XPA-201ENST00000375128 QRICH2Q9H0J4 1663 aa30.77■■■□□ 2.52
XPA-201ENST00000375128 CDC42BPGQ6DT37 1551 aa30.77■■■□□ 2.52
XPA-201ENST00000375128 NUTM2FA1L443 756 aa30.74■■■□□ 2.51
XPA-201ENST00000375128 ADGRB2O60241 1585 aa30.73■■■□□ 2.51
XPA-201ENST00000375128 MST1RQ04912 1400 aa30.73■■■□□ 2.51
XPA-201ENST00000375128 USP47Q96K76 1375 aa30.71■■■□□ 2.51
XPA-201ENST00000375128 FMN2Q9NZ56 1722 aa30.7■■■□□ 2.5
XPA-201ENST00000375128 WASLO00401 505 aaPredicted RBP30.7■■■□□ 2.5
XPA-201ENST00000375128 ST20-MTHFSA0A0A6YYL1 179 aa30.69■■■□□ 2.5
XPA-201ENST00000375128 C1orf167Q5SNV9 1468 aa30.67■■■□□ 2.5
XPA-201ENST00000375128 CDK19Q9BWU1 502 aa30.66■■■□□ 2.5
XPA-201ENST00000375128 ROBO1Q9Y6N7 1651 aa30.65■■■□□ 2.5
XPA-201ENST00000375128 ESCO1Q5FWF5 840 aa30.63■■■□□ 2.49
XPA-201ENST00000375128 RGPD8O14715 1765 aaPredicted RBP30.62■■■□□ 2.49
XPA-201ENST00000375128 SRPK2P78362 688 aaKnown RBP30.62■■■□□ 2.49
XPA-201ENST00000375128 ORAI2Q96SN7 254 aa30.62■■■□□ 2.49
XPA-201ENST00000375128 EVC2Q86UK5 1308 aa30.62■■■□□ 2.49
XPA-201ENST00000375128 EIF4G2P78344 907 aaKnown RBP eCLIP30.61■■■□□ 2.49
XPA-201ENST00000375128 BRINP3Q76B58 766 aa30.61■■■□□ 2.49
XPA-201ENST00000375128 TULP4Q9NRJ4 1543 aa30.6■■■□□ 2.49
XPA-201ENST00000375128 CABP2Q9NPB3 220 aa30.59■■■□□ 2.49
XPA-201ENST00000375128 SBNO2Q9Y2G9 1366 aa30.59■■■□□ 2.49
XPA-201ENST00000375128 ZEB1P37275 1124 aaPredicted RBP30.58■■■□□ 2.49
XPA-201ENST00000375128 ANKARQ7Z5J8 1434 aa30.57■■■□□ 2.48
XPA-201ENST00000375128 ILDR1Q86SU0 546 aaPredicted RBP30.57■■■□□ 2.48
XPA-201ENST00000375128 USP32Q8NFA0 1604 aa30.57■■■□□ 2.48
XPA-201ENST00000375128 PRR36Q9H6K5 1346 aa30.56■■■□□ 2.48
XPA-201ENST00000375128 NUDT16Q96DE0 195 aaKnown RBP30.56■■■□□ 2.48
XPA-201ENST00000375128 TESK2Q96S53 571 aa30.56■■■□□ 2.48
XPA-201ENST00000375128 HSPA5P11021 654 aaKnown RBP30.56■■■□□ 2.48
XPA-201ENST00000375128 SLC24A1O60721 1099 aa30.53■■■□□ 2.48
XPA-201ENST00000375128 PHF8Q9UPP1 1060 aa30.52■■■□□ 2.48
XPA-201ENST00000375128 ATP7BP35670 1465 aa30.51■■■□□ 2.47
XPA-201ENST00000375128 HSPA1LP34931 641 aa30.5■■■□□ 2.47
XPA-201ENST00000375128 PMFBP1Q8TBY8 1022 aa30.5■■■□□ 2.47
XPA-201ENST00000375128 ITSN1Q15811 1721 aa30.49■■■□□ 2.47
XPA-201ENST00000375128 TMF1P82094 1093 aa30.49■■■□□ 2.47
XPA-201ENST00000375128 DDX17Q92841 729 aaKnown RBP30.49■■■□□ 2.47
XPA-201ENST00000375128 CCDC61Q9Y6R9 512 aa30.49■■■□□ 2.47
XPA-201ENST00000375128 KIF1AQ12756 1690 aa30.48■■■□□ 2.47
XPA-201ENST00000375128 PHLPP1O60346 1717 aa30.47■■■□□ 2.47
XPA-201ENST00000375128 FOXO3O43524 673 aa30.47■■■□□ 2.47
XPA-201ENST00000375128 NHSL1Q5SYE7 1610 aa30.45■■■□□ 2.46
XPA-201ENST00000375128 DISP3Q9P2K9 1392 aa30.44■■■□□ 2.46
XPA-201ENST00000375128 AHDC1Q5TGY3 1603 aaPredicted RBP30.44■■■□□ 2.46
XPA-201ENST00000375128 TOPAZ1Q8N9V7 1692 aa30.44■■■□□ 2.46
XPA-201ENST00000375128 PPIP5K1Q6PFW1 1433 aa30.43■■■□□ 2.46
XPA-201ENST00000375128 NPHP3Q7Z494 1330 aa30.43■■■□□ 2.46
XPA-201ENST00000375128 ATAD2Q6PL18 1390 aa30.42■■■□□ 2.46
XPA-201ENST00000375128 NGDNQ8NEJ9 315 aaKnown RBP30.42■■■□□ 2.46
XPA-201ENST00000375128 XPCQ01831 940 aaPredicted RBP30.41■■■□□ 2.46
XPA-201ENST00000375128 CABP1Q9NZU7 370 aa30.41■■■□□ 2.46
XPA-201ENST00000375128 PSME1Q06323 249 aa30.39■■■□□ 2.46
XPA-201ENST00000375128 PLEKHG3A1L390 1219 aa30.39■■■□□ 2.45
XPA-201ENST00000375128 CDCA8Q53HL2 280 aa30.39■■■□□ 2.45
XPA-201ENST00000375128 PUS7Q96PZ0 661 aaKnown RBP30.39■■■□□ 2.45
XPA-201ENST00000375128 TMC1Q8TDI8 760 aa30.38■■■□□ 2.45
XPA-201ENST00000375128 KRT28Q7Z3Y7 464 aa30.37■■■□□ 2.45
XPA-201ENST00000375128 ACEP12821 1306 aa30.37■■■□□ 2.45
XPA-201ENST00000375128 COL16A1Q07092 1604 aaPredicted RBP30.36■■■□□ 2.45
XPA-201ENST00000375128 SOS2Q07890 1332 aaPredicted RBP30.36■■■□□ 2.45
XPA-201ENST00000375128 POLR3GLQ9BT43 218 aa30.35■■■□□ 2.45
XPA-201ENST00000375128 LRRC59Q96AG4 307 aaKnown RBP30.32■■■□□ 2.44
XPA-201ENST00000375128 PXDNQ92626 1479 aa30.32■■■□□ 2.44
XPA-201ENST00000375128 POLR3AO14802 1390 aaPredicted RBP30.32■■■□□ 2.44
XPA-201ENST00000375128 SLC12A5Q9H2X9 1139 aa30.3■■■□□ 2.44
XPA-201ENST00000375128 C11orf95C9JLR9 678 aaPredicted RBP30.27■■■□□ 2.44
XPA-201ENST00000375128 PAK3O75914 559 aaPredicted RBP30.26■■■□□ 2.43
XPA-201ENST00000375128 JCADQ9P266 1359 aa30.25■■■□□ 2.43
XPA-201ENST00000375128 LMOD2Q6P5Q4 547 aa30.24■■■□□ 2.43
XPA-201ENST00000375128 ZNF692Q9BU19 519 aaPredicted RBP30.24■■■□□ 2.43
XPA-201ENST00000375128 NINLQ9Y2I6 1382 aa30.24■■■□□ 2.43
XPA-201ENST00000375128 HDGFL2Q7Z4V5 671 aaPredicted RBP30.23■■■□□ 2.43
XPA-201ENST00000375128 AKAP12Q02952 1782 aa30.23■■■□□ 2.43
XPA-201ENST00000375128 SPATA31A3Q5VYP0 1347 aa30.23■■■□□ 2.43
XPA-201ENST00000375128 SBNO1A3KN83 1393 aa30.22■■■□□ 2.43
XPA-201ENST00000375128 TERF2IPQ9NYB0 399 aa30.22■■■□□ 2.43
XPA-201ENST00000375128 TRPM3Q9HCF6 1732 aaPredicted RBP30.22■■■□□ 2.43
XPA-201ENST00000375128 KTN1Q86UP2 1357 aaKnown RBP30.21■■■□□ 2.43
XPA-201ENST00000375128 USP6P35125 1406 aa30.2■■■□□ 2.42
XPA-201ENST00000375128 CPSF1Q10570 1443 aaKnown RBP30.2■■■□□ 2.42
XPA-201ENST00000375128 TNS3Q68CZ2 1445 aa30.2■■■□□ 2.42
XPA-201ENST00000375128 CD163L1Q9NR16 1453 aa30.19■■■□□ 2.42
XPA-201ENST00000375128 SHPRHQ149N8 1683 aa30.18■■■□□ 2.42
XPA-201ENST00000375128 PNPLA6Q8IY17 1366 aa30.18■■■□□ 2.42
XPA-201ENST00000375128 KIF7Q2M1P5 1343 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms