RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 SETBP1Q9Y6X0 1596 aa24.11■■□□□ 1.45
RXRB-202ENST00000374685 SBNO2Q9Y2G9 1366 aa24.11■■□□□ 1.45
RXRB-202ENST00000374685 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
RXRB-202ENST00000374685 PREX1Q8TCU6 1659 aa24.08■■□□□ 1.44
RXRB-202ENST00000374685 WAPLQ7Z5K2 1190 aa24.07■■□□□ 1.44
RXRB-202ENST00000374685 MTHFSP49914 203 aa24.06■■□□□ 1.44
RXRB-202ENST00000374685 GOLGA2Q08379 1002 aa24.06■■□□□ 1.44
RXRB-202ENST00000374685 NPC1L1Q9UHC9 1359 aa24.06■■□□□ 1.44
RXRB-202ENST00000374685 CGNL1Q0VF96 1302 aa24.06■■□□□ 1.44
RXRB-202ENST00000374685 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
RXRB-202ENST00000374685 SPINK5Q9NQ38 1064 aaPredicted RBP24.05■■□□□ 1.44
RXRB-202ENST00000374685 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
RXRB-202ENST00000374685 MYO3AQ8NEV4 1616 aa24.04■■□□□ 1.44
RXRB-202ENST00000374685 ZMYM4Q5VZL5 1548 aa24.03■■□□□ 1.44
RXRB-202ENST00000374685 C20orf194Q5TEA3 1177 aa24.03■■□□□ 1.44
RXRB-202ENST00000374685 DMRT2Q9Y5R5 561 aa24.02■■□□□ 1.44
RXRB-202ENST00000374685 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
RXRB-202ENST00000374685 DUSP27Q5VZP5 1158 aa24.02■■□□□ 1.43
RXRB-202ENST00000374685 CLTCQ00610 1675 aaKnown RBP24.01■■□□□ 1.43
RXRB-202ENST00000374685 TMEM131LA2VDJ0 1609 aa24.01■■□□□ 1.43
RXRB-202ENST00000374685 DEKP35659 375 aaKnown RBP24.01■■□□□ 1.43
RXRB-202ENST00000374685 CRBNQ96SW2 442 aa24.01■■□□□ 1.43
RXRB-202ENST00000374685 YTHDC2Q9H6S0 1430 aaKnown RBP23.99■■□□□ 1.43
RXRB-202ENST00000374685 CDK19Q9BWU1 502 aa23.98■■□□□ 1.43
RXRB-202ENST00000374685 ARHGEF28Q8N1W1 1705 aaKnown RBP23.98■■□□□ 1.43
RXRB-202ENST00000374685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
RXRB-202ENST00000374685 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
RXRB-202ENST00000374685 A0A1W2PP64 1363 aa23.97■■□□□ 1.43
RXRB-202ENST00000374685 U2AF1L5P0DN76 240 aaPredicted RBP23.96■■□□□ 1.43
RXRB-202ENST00000374685 U2AF1Q01081 240 aaKnown RBP eCLIP23.96■■□□□ 1.432e-7■■■■□ 22.9
RXRB-202ENST00000374685 ANKRD36BQ8N2N9 1353 aa23.96■■□□□ 1.43
RXRB-202ENST00000374685 SKAP1Q86WV1 359 aa23.95■■□□□ 1.42
RXRB-202ENST00000374685 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
RXRB-202ENST00000374685 FBLN1P23142 703 aa23.95■■□□□ 1.42
RXRB-202ENST00000374685 CEBPAP49715 358 aaPredicted RBP23.95■■□□□ 1.42
RXRB-202ENST00000374685 PPM1GO15355 546 aaPredicted RBP23.94■■□□□ 1.42
RXRB-202ENST00000374685 TXNDC2Q86VQ3 553 aa23.94■■□□□ 1.42
RXRB-202ENST00000374685 SLFN5Q08AF3 891 aa23.94■■□□□ 1.42
RXRB-202ENST00000374685 ZMYM3Q14202 1370 aa23.94■■□□□ 1.42
RXRB-202ENST00000374685 CFAP53Q96M91 514 aa23.94■■□□□ 1.42
RXRB-202ENST00000374685 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
RXRB-202ENST00000374685 INSRP06213 1382 aa23.93■■□□□ 1.42
RXRB-202ENST00000374685 ZNF521Q96K83 1311 aa23.93■■□□□ 1.42
RXRB-202ENST00000374685 ZFYVE9O95405 1425 aa23.93■■□□□ 1.42
RXRB-202ENST00000374685 ANO8Q9HCE9 1232 aaPredicted RBP23.91■■□□□ 1.42
RXRB-202ENST00000374685 TERF2IPQ9NYB0 399 aa23.91■■□□□ 1.42
RXRB-202ENST00000374685 PTPRMP28827 1452 aa23.91■■□□□ 1.42
RXRB-202ENST00000374685 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
RXRB-202ENST00000374685 POLR3AO14802 1390 aaPredicted RBP23.9■■□□□ 1.42
RXRB-202ENST00000374685 A2ML1A8K2U0 1454 aa23.9■■□□□ 1.42
RXRB-202ENST00000374685 BCAR3O75815 825 aa23.9■■□□□ 1.42
RXRB-202ENST00000374685 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
RXRB-202ENST00000374685 NUTM2FA1L443 756 aa23.89■■□□□ 1.42
RXRB-202ENST00000374685 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
RXRB-202ENST00000374685 NCKAP5LQ9HCH0 1330 aa23.88■■□□□ 1.41
RXRB-202ENST00000374685 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
RXRB-202ENST00000374685 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
RXRB-202ENST00000374685 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
RXRB-202ENST00000374685 FYB1O15117 783 aa23.87■■□□□ 1.41
RXRB-202ENST00000374685 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
RXRB-202ENST00000374685 AGLP35573 1532 aa23.86■■□□□ 1.41
RXRB-202ENST00000374685 RUNDC1Q96C34 613 aa23.86■■□□□ 1.41
RXRB-202ENST00000374685 ATAD2Q6PL18 1390 aa23.85■■□□□ 1.41
RXRB-202ENST00000374685 E9PSI1 815 aa23.84■■□□□ 1.41
RXRB-202ENST00000374685 METP08581 1390 aa23.84■■□□□ 1.41
RXRB-202ENST00000374685 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.4
RXRB-202ENST00000374685 BCL2L13Q9BXK5 485 aa23.83■■□□□ 1.4
RXRB-202ENST00000374685 ARHGEF40Q8TER5 1519 aa23.82■■□□□ 1.4
RXRB-202ENST00000374685 FRAT1Q92837 279 aaPredicted RBP23.82■■□□□ 1.4
RXRB-202ENST00000374685 PUS7Q96PZ0 661 aaKnown RBP23.82■■□□□ 1.4
RXRB-202ENST00000374685 ABCC11Q96J66 1382 aa23.8■■□□□ 1.4
RXRB-202ENST00000374685 SLC26A8Q96RN1 970 aa23.79■■□□□ 1.4
RXRB-202ENST00000374685 TNRQ92752 1358 aa23.79■■□□□ 1.4
RXRB-202ENST00000374685 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.79■■□□□ 1.4
RXRB-202ENST00000374685 SPATA31D1Q6ZQQ2 1576 aa23.79■■□□□ 1.4
RXRB-202ENST00000374685 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
RXRB-202ENST00000374685 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.77■■□□□ 1.4
RXRB-202ENST00000374685 NKTRP30414 1462 aaKnown RBP23.77■■□□□ 1.4
RXRB-202ENST00000374685 REREQ9P2R6 1566 aa23.77■■□□□ 1.4
RXRB-202ENST00000374685 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
RXRB-202ENST00000374685 TRMT2AQ8IZ69 625 aaKnown RBP23.76■■□□□ 1.39
RXRB-202ENST00000374685 NSD2O96028 1365 aa23.75■■□□□ 1.39
RXRB-202ENST00000374685 CD163L1Q9NR16 1453 aa23.74■■□□□ 1.39
RXRB-202ENST00000374685 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
RXRB-202ENST00000374685 NME9Q86XW9 330 aa23.74■■□□□ 1.39
RXRB-202ENST00000374685 SHPRHQ149N8 1683 aa23.73■■□□□ 1.39
RXRB-202ENST00000374685 LTKP29376 864 aa23.73■■□□□ 1.39
RXRB-202ENST00000374685 HDGFP51858 240 aaKnown RBP23.72■■□□□ 1.39
RXRB-202ENST00000374685 PANK1Q8TE04 598 aa23.72■■□□□ 1.39
RXRB-202ENST00000374685 TSR2Q969E8 191 aaKnown RBP23.72■■□□□ 1.39
RXRB-202ENST00000374685 MAPK8IP3Q9UPT6 1336 aa23.72■■□□□ 1.39
RXRB-202ENST00000374685 NINLQ9Y2I6 1382 aa23.72■■□□□ 1.39
RXRB-202ENST00000374685 NUDT16Q96DE0 195 aaKnown RBP23.72■■□□□ 1.39
RXRB-202ENST00000374685 SOX12O15370 315 aa23.71■■□□□ 1.39
RXRB-202ENST00000374685 DIAPH1O60610 1272 aaKnown RBP23.7■■□□□ 1.38
RXRB-202ENST00000374685 HMOX1P09601 288 aa23.69■■□□□ 1.38
RXRB-202ENST00000374685 CLUAP1Q96AJ1 413 aa23.69■■□□□ 1.38
RXRB-202ENST00000374685 COG6Q9Y2V7 657 aa23.69■■□□□ 1.38
RXRB-202ENST00000374685 EMILIN1Q9Y6C2 1016 aa23.69■■□□□ 1.38
RXRB-202ENST00000374685 TNNQ9UQP3 1299 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms