RNA–Protein interactions for RNA: ENST00000374617.8

WDR46-231, Transcript of WD repeat domain 46, human

APPRIS P1 TSL 1 (best) BASIC

Gene WDR46, Length 2,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-231	ENST00000374617	PRAM1	Q96QH2	718 aa		19.62	■□□□□ 0.73
WDR46-231	ENST00000374617	GPRASP1	Q5JY77	1395 aa		19.61	■□□□□ 0.73
WDR46-231	ENST00000374617	PLEKHH1	Q9ULM0	1364 aa		19.6	■□□□□ 0.73
WDR46-231	ENST00000374617	RALGAPB	Q86X10	1494 aa		19.6	■□□□□ 0.73
WDR46-231	ENST00000374617	SLAIN2	Q9P270	581 aa		19.6	■□□□□ 0.73
WDR46-231	ENST00000374617	NALCN	Q8IZF0	1738 aa		19.59	■□□□□ 0.73
WDR46-231	ENST00000374617	ARHGEF28	Q8N1W1	1705 aa	Known RBP	19.57	■□□□□ 0.72
WDR46-231	ENST00000374617	CARD11	Q9BXL7	1154 aa		19.56	■□□□□ 0.72
WDR46-231	ENST00000374617	PIP4K2B	P78356	416 aa		19.56	■□□□□ 0.72
WDR46-231	ENST00000374617	CDC42BPG	Q6DT37	1551 aa		19.55	■□□□□ 0.72
WDR46-231	ENST00000374617	SAFB2	Q14151	953 aa	Known RBP eCLIP	19.54	■□□□□ 0.72
WDR46-231	ENST00000374617	ILDR1	Q86SU0	546 aa	Predicted RBP	19.54	■□□□□ 0.72
WDR46-231	ENST00000374617	EIF3A	Q14152	1382 aa	Known RBP	19.54	■□□□□ 0.72
WDR46-231	ENST00000374617	SCAF1	Q9H7N4	1312 aa	Known RBP	19.53	■□□□□ 0.72
WDR46-231	ENST00000374617	CENPJ	Q9HC77	1338 aa	Predicted RBP	19.53	■□□□□ 0.72
WDR46-231	ENST00000374617	MST1R	Q04912	1400 aa		19.53	■□□□□ 0.72
WDR46-231	ENST00000374617	ADGRB2	O60241	1585 aa		19.51	■□□□□ 0.71
WDR46-231	ENST00000374617	MINK1	Q8N4C8	1332 aa	Predicted RBP	19.5	■□□□□ 0.71
WDR46-231	ENST00000374617	C1orf167	Q5SNV9	1468 aa		19.49	■□□□□ 0.71
WDR46-231	ENST00000374617	WASL	O00401	505 aa	Predicted RBP	19.48	■□□□□ 0.71
WDR46-231	ENST00000374617	ROBO1	Q9Y6N7	1651 aa		19.47	■□□□□ 0.71
WDR46-231	ENST00000374617	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.47	■□□□□ 0.71
WDR46-231	ENST00000374617	FMN2	Q9NZ56	1722 aa		19.47	■□□□□ 0.71
WDR46-231	ENST00000374617	BRINP3	Q76B58	766 aa		19.47	■□□□□ 0.71
WDR46-231	ENST00000374617	SLC24A1	O60721	1099 aa		19.45	■□□□□ 0.7
WDR46-231	ENST00000374617	ANKAR	Q7Z5J8	1434 aa		19.45	■□□□□ 0.7
WDR46-231	ENST00000374617	QRICH2	Q9H0J4	1663 aa		19.44	■□□□□ 0.7
WDR46-231	ENST00000374617	SBNO2	Q9Y2G9	1366 aa		19.44	■□□□□ 0.7
WDR46-231	ENST00000374617	CDK19	Q9BWU1	502 aa		19.43	■□□□□ 0.7
WDR46-231	ENST00000374617	ESCO1	Q5FWF5	840 aa		19.42	■□□□□ 0.7
WDR46-231	ENST00000374617	HSPA1L	P34931	641 aa		19.42	■□□□□ 0.7
WDR46-231	ENST00000374617	ORAI2	Q96SN7	254 aa		19.42	■□□□□ 0.7
WDR46-231	ENST00000374617	EVC2	Q86UK5	1308 aa		19.41	■□□□□ 0.7
WDR46-231	ENST00000374617	TULP4	Q9NRJ4	1543 aa		19.41	■□□□□ 0.7
WDR46-231	ENST00000374617	NUTM2F	A1L443	756 aa		19.41	■□□□□ 0.7
WDR46-231	ENST00000374617	USP47	Q96K76	1375 aa		19.4	■□□□□ 0.7
WDR46-231	ENST00000374617	ST20-MTHFS	A0A0A6YYL1	179 aa		19.39	■□□□□ 0.69
WDR46-231	ENST00000374617	AHDC1	Q5TGY3	1603 aa	Predicted RBP	19.39	■□□□□ 0.69
WDR46-231	ENST00000374617	NUDT16	Q96DE0	195 aa	Known RBP	19.38	■□□□□ 0.69
WDR46-231	ENST00000374617	PHF8	Q9UPP1	1060 aa		19.37	■□□□□ 0.69
WDR46-231	ENST00000374617	USP32	Q8NFA0	1604 aa		19.37	■□□□□ 0.69
WDR46-231	ENST00000374617	SRPK2	P78362	688 aa	Known RBP	19.36	■□□□□ 0.69
WDR46-231	ENST00000374617	CCDC61	Q9Y6R9	512 aa		19.36	■□□□□ 0.69
WDR46-231	ENST00000374617	PRR36	Q9H6K5	1346 aa		19.36	■□□□□ 0.69
WDR46-231	ENST00000374617	NHSL1	Q5SYE7	1610 aa		19.36	■□□□□ 0.69
WDR46-231	ENST00000374617	KIF1A	Q12756	1690 aa		19.36	■□□□□ 0.69
WDR46-231	ENST00000374617	NPHP3	Q7Z494	1330 aa		19.36	■□□□□ 0.69
WDR46-231	ENST00000374617	PUS7	Q96PZ0	661 aa	Known RBP	19.35	■□□□□ 0.69
WDR46-231	ENST00000374617	TESK2	Q96S53	571 aa		19.35	■□□□□ 0.69
WDR46-231	ENST00000374617	RGPD8	O14715	1765 aa	Predicted RBP	19.35	■□□□□ 0.69
WDR46-231	ENST00000374617	PHLPP1	O60346	1717 aa		19.35	■□□□□ 0.69
WDR46-231	ENST00000374617	ATP7B	P35670	1465 aa		19.35	■□□□□ 0.69
WDR46-231	ENST00000374617	EIF4G2	P78344	907 aa	Known RBP eCLIP	19.34	■□□□□ 0.69
WDR46-231	ENST00000374617	FOXO3	O43524	673 aa		19.33	■□□□□ 0.69
WDR46-231	ENST00000374617	CABP2	Q9NPB3	220 aa		19.33	■□□□□ 0.69
WDR46-231	ENST00000374617	SOS2	Q07890	1332 aa	Predicted RBP	19.33	■□□□□ 0.69
WDR46-231	ENST00000374617	ITSN1	Q15811	1721 aa		19.33	■□□□□ 0.68
WDR46-231	ENST00000374617	LRRC59	Q96AG4	307 aa	Known RBP	19.32	■□□□□ 0.68
WDR46-231	ENST00000374617	PLEKHG3	A1L390	1219 aa		19.32	■□□□□ 0.68
WDR46-231	ENST00000374617	COL16A1	Q07092	1604 aa	Predicted RBP	19.31	■□□□□ 0.68
WDR46-231	ENST00000374617	ATAD2	Q6PL18	1390 aa		19.3	■□□□□ 0.68
WDR46-231	ENST00000374617	TMF1	P82094	1093 aa		19.3	■□□□□ 0.68
WDR46-231	ENST00000374617	PSME1	Q06323	249 aa		19.3	■□□□□ 0.68
WDR46-231	ENST00000374617	PMFBP1	Q8TBY8	1022 aa		19.3	■□□□□ 0.68
WDR46-231	ENST00000374617	DDX17	Q92841	729 aa	Known RBP	19.3	■□□□□ 0.68
WDR46-231	ENST00000374617	TOPAZ1	Q8N9V7	1692 aa		19.29	■□□□□ 0.68
WDR46-231	ENST00000374617	CDCA8	Q53HL2	280 aa		19.28	■□□□□ 0.68
WDR46-231	ENST00000374617	NGDN	Q8NEJ9	315 aa	Known RBP	19.28	■□□□□ 0.68
WDR46-231	ENST00000374617	JCAD	Q9P266	1359 aa		19.28	■□□□□ 0.68
WDR46-231	ENST00000374617	KRT28	Q7Z3Y7	464 aa		19.28	■□□□□ 0.68
WDR46-231	ENST00000374617	PXDN	Q92626	1479 aa		19.28	■□□□□ 0.68
WDR46-231	ENST00000374617	PPIP5K1	Q6PFW1	1433 aa		19.28	■□□□□ 0.68
WDR46-231	ENST00000374617	POLR3A	O14802	1390 aa	Predicted RBP	19.27	■□□□□ 0.68
WDR46-231	ENST00000374617	HSPA5	P11021	654 aa	Known RBP	19.27	■□□□□ 0.68
WDR46-231	ENST00000374617	CABP1	Q9NZU7	370 aa		19.26	■□□□□ 0.67
WDR46-231	ENST00000374617	ACE	P12821	1306 aa		19.25	■□□□□ 0.67
WDR46-231	ENST00000374617	SBNO1	A3KN83	1393 aa		19.24	■□□□□ 0.67
WDR46-231	ENST00000374617	ZNF692	Q9BU19	519 aa	Predicted RBP	19.23	■□□□□ 0.67
WDR46-231	ENST00000374617	BRD4	O60885	1362 aa	Predicted RBP	19.23	■□□□□ 0.67
WDR46-231	ENST00000374617	XPC	Q01831	940 aa	Predicted RBP	19.22	■□□□□ 0.67
WDR46-231	ENST00000374617	DISP3	Q9P2K9	1392 aa		19.22	■□□□□ 0.67
WDR46-231	ENST00000374617	NINL	Q9Y2I6	1382 aa		19.22	■□□□□ 0.67
WDR46-231	ENST00000374617	SHPRH	Q149N8	1683 aa		19.22	■□□□□ 0.67
WDR46-231	ENST00000374617	SPATA31A6	Q5VVP1	1343 aa		19.22	■□□□□ 0.67
WDR46-231	ENST00000374617	SPATA31A3	Q5VYP0	1347 aa		19.22	■□□□□ 0.67
WDR46-231	ENST00000374617	PNPLA6	Q8IY17	1366 aa		19.2	■□□□□ 0.66
WDR46-231	ENST00000374617	TNS3	Q68CZ2	1445 aa		19.19	■□□□□ 0.66
WDR46-231	ENST00000374617	TMC1	Q8TDI8	760 aa		19.18	■□□□□ 0.66
WDR46-231	ENST00000374617	ARHGEF10	O15013	1369 aa		19.18	■□□□□ 0.66
WDR46-231	ENST00000374617	ZNF316	A6NFI3	1004 aa	Predicted RBP	19.18	■□□□□ 0.66
WDR46-231	ENST00000374617	CPSF1	Q10570	1443 aa	Known RBP	19.17	■□□□□ 0.66
WDR46-231	ENST00000374617	SLC12A5	Q9H2X9	1139 aa		19.17	■□□□□ 0.66
WDR46-231	ENST00000374617	TERF2IP	Q9NYB0	399 aa		19.17	■□□□□ 0.66
WDR46-231	ENST00000374617	TRPM3	Q9HCF6	1732 aa	Predicted RBP	19.17	■□□□□ 0.66
WDR46-231	ENST00000374617	COL22A1	Q8NFW1	1626 aa	Predicted RBP	19.16	■□□□□ 0.66
WDR46-231	ENST00000374617	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	19.15	■□□□□ 0.66
WDR46-231	ENST00000374617	USP6	P35125	1406 aa		19.15	■□□□□ 0.66
WDR46-231	ENST00000374617	PAK3	O75914	559 aa	Predicted RBP	19.15	■□□□□ 0.66
WDR46-231	ENST00000374617	AKAP12	Q02952	1782 aa		19.13	■□□□□ 0.65
WDR46-231	ENST00000374617	KTN1	Q86UP2	1357 aa	Known RBP	19.13	■□□□□ 0.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms