RNA–Protein interactions for RNA: ENST00000374455.2

RASGEF1A-201, Transcript of RasGEF domain family member 1A, humanhuman

TSL 5

Gene RASGEF1A, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-201ENST00000374455 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
RASGEF1A-201ENST00000374455 GLI3P10071 1580 aa16.4■□□□□ 0.22
RASGEF1A-201ENST00000374455 NAIPQ13075 1403 aa16.4■□□□□ 0.22
RASGEF1A-201ENST00000374455 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
RASGEF1A-201ENST00000374455 METP08581 1390 aa16.39■□□□□ 0.21
RASGEF1A-201ENST00000374455 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
RASGEF1A-201ENST00000374455 NUP155O75694 1391 aa16.38■□□□□ 0.21
RASGEF1A-201ENST00000374455 MYOM2P54296 1465 aa16.38■□□□□ 0.21
RASGEF1A-201ENST00000374455 HRCP23327 699 aa16.38■□□□□ 0.21
RASGEF1A-201ENST00000374455 SF3B2Q13435 895 aaKnown RBP16.36■□□□□ 0.21
RASGEF1A-201ENST00000374455 SPHKAPQ2M3C7 1700 aa16.36■□□□□ 0.21
RASGEF1A-201ENST00000374455 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
RASGEF1A-201ENST00000374455 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
RASGEF1A-201ENST00000374455 YY1P25490 414 aa16.3■□□□□ 0.2
RASGEF1A-201ENST00000374455 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
RASGEF1A-201ENST00000374455 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
RASGEF1A-201ENST00000374455 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
RASGEF1A-201ENST00000374455 SLIT2O94813 1529 aa16.28■□□□□ 0.2
RASGEF1A-201ENST00000374455 PXDNQ92626 1479 aa16.28■□□□□ 0.2
RASGEF1A-201ENST00000374455 KIF1BO60333 1816 aa16.25■□□□□ 0.19
RASGEF1A-201ENST00000374455 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
RASGEF1A-201ENST00000374455 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
RASGEF1A-201ENST00000374455 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
RASGEF1A-201ENST00000374455 BAG6P46379 1132 aa16.24■□□□□ 0.19
RASGEF1A-201ENST00000374455 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
RASGEF1A-201ENST00000374455 KRT27Q7Z3Y8 459 aa16.23■□□□□ 0.19
RASGEF1A-201ENST00000374455 USP32Q8NFA0 1604 aa16.23■□□□□ 0.19
RASGEF1A-201ENST00000374455 PLCH1Q4KWH8 1693 aa16.22■□□□□ 0.19
RASGEF1A-201ENST00000374455 FOXO3O43524 673 aa16.22■□□□□ 0.19
RASGEF1A-201ENST00000374455 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
RASGEF1A-201ENST00000374455 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
RASGEF1A-201ENST00000374455 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
RASGEF1A-201ENST00000374455 RGPD1P0DJD0 1748 aa16.2■□□□□ 0.18
RASGEF1A-201ENST00000374455 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
RASGEF1A-201ENST00000374455 CCDC9Q9Y3X0 531 aaKnown RBP16.19■□□□□ 0.18
RASGEF1A-201ENST00000374455 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
RASGEF1A-201ENST00000374455 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
RASGEF1A-201ENST00000374455 ONECUT3O60422 494 aaPredicted RBP16.18■□□□□ 0.18
RASGEF1A-201ENST00000374455 VPS72Q15906 364 aa16.18■□□□□ 0.18
RASGEF1A-201ENST00000374455 NWD2Q9ULI1 1742 aa16.18■□□□□ 0.18
RASGEF1A-201ENST00000374455 TNS1Q9HBL0 1735 aaKnown RBP16.17■□□□□ 0.18
RASGEF1A-201ENST00000374455 A0A0G2JS52 829 aa16.16■□□□□ 0.18
RASGEF1A-201ENST00000374455 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
RASGEF1A-201ENST00000374455 MYT1Q01538 1121 aa16.16■□□□□ 0.18
RASGEF1A-201ENST00000374455 FAM182BQ5T319 152 aa16.16■□□□□ 0.18
RASGEF1A-201ENST00000374455 CDC42BPGQ6DT37 1551 aa16.16■□□□□ 0.18
RASGEF1A-201ENST00000374455 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
RASGEF1A-201ENST00000374455 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
RASGEF1A-201ENST00000374455 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
RASGEF1A-201ENST00000374455 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
RASGEF1A-201ENST00000374455 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
RASGEF1A-201ENST00000374455 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
RASGEF1A-201ENST00000374455 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
RASGEF1A-201ENST00000374455 FAM98CQ17RN3 349 aaKnown RBP16.11■□□□□ 0.17
RASGEF1A-201ENST00000374455 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
RASGEF1A-201ENST00000374455 LRPPRCP42704 1394 aaKnown RBP16.11■□□□□ 0.17
RASGEF1A-201ENST00000374455 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
RASGEF1A-201ENST00000374455 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
RASGEF1A-201ENST00000374455 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
RASGEF1A-201ENST00000374455 RGPD8O14715 1765 aaPredicted RBP16.1■□□□□ 0.17
RASGEF1A-201ENST00000374455 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
RASGEF1A-201ENST00000374455 DISP2A7MBM2 1401 aa16.09■□□□□ 0.17
RASGEF1A-201ENST00000374455 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
RASGEF1A-201ENST00000374455 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
RASGEF1A-201ENST00000374455 KIF1AQ12756 1690 aa16.07■□□□□ 0.16
RASGEF1A-201ENST00000374455 PPLO60437 1756 aa16.07■□□□□ 0.16
RASGEF1A-201ENST00000374455 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
RASGEF1A-201ENST00000374455 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
RASGEF1A-201ENST00000374455 FAM83GA6ND36 823 aa16.06■□□□□ 0.16
RASGEF1A-201ENST00000374455 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
RASGEF1A-201ENST00000374455 NUP188Q5SRE5 1749 aa16.05■□□□□ 0.16
RASGEF1A-201ENST00000374455 RREB1Q92766 1687 aa16.05■□□□□ 0.16
RASGEF1A-201ENST00000374455 TNS3Q68CZ2 1445 aa16.04■□□□□ 0.16
RASGEF1A-201ENST00000374455 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
RASGEF1A-201ENST00000374455 IFT172Q9UG01 1749 aa16.04■□□□□ 0.16
RASGEF1A-201ENST00000374455 UTRNP46939 3433 aa16.04■□□□□ 0.16
RASGEF1A-201ENST00000374455 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
RASGEF1A-201ENST00000374455 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
RASGEF1A-201ENST00000374455 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
RASGEF1A-201ENST00000374455 TRIM37O94972 964 aa16.02■□□□□ 0.16
RASGEF1A-201ENST00000374455 PPP1R1BQ9UD71 204 aaPredicted RBP16.02■□□□□ 0.16
RASGEF1A-201ENST00000374455 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
RASGEF1A-201ENST00000374455 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
RASGEF1A-201ENST00000374455 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
RASGEF1A-201ENST00000374455 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
RASGEF1A-201ENST00000374455 BTG4Q9NY30 223 aa16■□□□□ 0.15
RASGEF1A-201ENST00000374455 PLEKHH1Q9ULM0 1364 aa16■□□□□ 0.15
RASGEF1A-201ENST00000374455 APBA3O96018 575 aa15.99■□□□□ 0.15
RASGEF1A-201ENST00000374455 STK26Q9P289 416 aa15.99■□□□□ 0.15
RASGEF1A-201ENST00000374455 COL14A1Q05707 1796 aaKnown RBP15.98■□□□□ 0.15
RASGEF1A-201ENST00000374455 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
RASGEF1A-201ENST00000374455 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
RASGEF1A-201ENST00000374455 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
RASGEF1A-201ENST00000374455 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
RASGEF1A-201ENST00000374455 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
RASGEF1A-201ENST00000374455 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
RASGEF1A-201ENST00000374455 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
RASGEF1A-201ENST00000374455 KCNQ2O43526 872 aa15.96■□□□□ 0.15
RASGEF1A-201ENST00000374455 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
RASGEF1A-201ENST00000374455 CHD4Q14839 1912 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms