RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 CRACR2AQ9BSW2 395 aa8.39□□□□□ -1.07
CSMD2-206ENST00000373388 FOXD4L1Q9NU39 408 aa8.39□□□□□ -1.07
CSMD2-206ENST00000373388 CPLX2Q6PUV4 134 aaKnown RBP8.39□□□□□ -1.07
CSMD2-206ENST00000373388 FHAD1B1AJZ9 1412 aa8.39□□□□□ -1.07
CSMD2-206ENST00000373388 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
CSMD2-206ENST00000373388 FAM184BQ9ULE4 1060 aa8.39□□□□□ -1.07
CSMD2-206ENST00000373388 KIF18AQ8NI77 898 aa8.39□□□□□ -1.07
CSMD2-206ENST00000373388 FOXD1Q16676 465 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.38□□□□□ -1.07
CSMD2-206ENST00000373388 SEPT14Q6ZU15 432 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 NOL10Q9BSC4 688 aaKnown RBP8.38□□□□□ -1.07
CSMD2-206ENST00000373388 CCDC94Q9BW85 323 aaPredicted RBP8.38□□□□□ -1.07
CSMD2-206ENST00000373388 SETD5Q9C0A6 1442 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 ANKRD30AQ9BXX3 1397 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
CSMD2-206ENST00000373388 DNAJC21Q5F1R6 531 aaKnown RBP8.38□□□□□ -1.07
CSMD2-206ENST00000373388 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 PPM1EQ8WY54 764 aa8.38□□□□□ -1.07
CSMD2-206ENST00000373388 NAP1L1P55209 391 aaKnown RBP8.38□□□□□ -1.07
CSMD2-206ENST00000373388 RSRC1Q96IZ7 334 aaKnown RBP8.37□□□□□ -1.07
CSMD2-206ENST00000373388 SH2D4BQ5SQS7 431 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 SPECC1LQ69YQ0 1117 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 V9GYY5 206 aaPredicted RBP8.37□□□□□ -1.07
CSMD2-206ENST00000373388 CLCN1P35523 988 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 E9PSI1 815 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 CWC22Q9HCG8 908 aaKnown RBP8.37□□□□□ -1.07
CSMD2-206ENST00000373388 ODF2Q5BJF6 829 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 C22orf23Q9BZE7 217 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 BCCIPQ9P287 314 aaKnown RBP eCLIP8.37□□□□□ -1.07
CSMD2-206ENST00000373388 PLEKHD1A6NEE1 506 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 TUBB4BP68371 445 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 SAFB2Q14151 953 aaKnown RBP eCLIP8.37□□□□□ -1.07
CSMD2-206ENST00000373388 CBFA2T2O43439 604 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 NEMFO60524 1076 aa8.37□□□□□ -1.07
CSMD2-206ENST00000373388 POGKQ9P215 609 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
CSMD2-206ENST00000373388 KIF3CO14782 793 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
CSMD2-206ENST00000373388 SMC2O95347 1197 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 FAM193AP78312 1265 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 TTC31Q49AM3 519 aaPredicted RBP8.36□□□□□ -1.07
CSMD2-206ENST00000373388 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
CSMD2-206ENST00000373388 SEPT7Q16181 437 aaKnown RBP8.36□□□□□ -1.07
CSMD2-206ENST00000373388 HSPA4P34932 840 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 TICAM2Q86XR7 235 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 PPP4R3BQ5MIZ7 849 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 GBP6Q6ZN66 633 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 MYCBPQ99417 103 aaPredicted RBP8.36□□□□□ -1.07
CSMD2-206ENST00000373388 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
CSMD2-206ENST00000373388 PRPF40AO75400 957 aaKnown RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 CCAR1Q8IX12 1150 aaKnown RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 ZNHIT6Q9NWK9 470 aaKnown RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 INTS3Q68E01 1043 aaKnown RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 FRAT2O75474 233 aaPredicted RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 FOXD4L5Q5VV16 416 aaPredicted RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 FOXD4L4Q8WXT5 416 aaPredicted RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 NPHP1O15259 732 aa8.35□□□□□ -1.07
CSMD2-206ENST00000373388 ZBTB17Q13105 803 aa8.35□□□□□ -1.07
CSMD2-206ENST00000373388 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
CSMD2-206ENST00000373388 PAXBP1Q9Y5B6 917 aa8.35□□□□□ -1.07
CSMD2-206ENST00000373388 SMC1AQ14683 1233 aaKnown RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
CSMD2-206ENST00000373388 TXLNAP40222 546 aa8.35□□□□□ -1.07
CSMD2-206ENST00000373388 TCHPQ9BT92 498 aa8.35□□□□□ -1.07
CSMD2-206ENST00000373388 CCDC175P0C221 793 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 HS1BP3Q53T59 392 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 DDX19BQ9UMR2 479 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 TUBB4AP04350 444 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 TRIM29Q14134 588 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 NOL8Q76FK4 1167 aaKnown RBP8.34□□□□□ -1.07
CSMD2-206ENST00000373388 ANKS4BQ8N8V4 417 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 C11orf95C9JLR9 678 aaPredicted RBP8.34□□□□□ -1.07
CSMD2-206ENST00000373388 CAVIN2O95810 425 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 JAKMIP3Q5VZ66 844 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 DAAM2Q86T65 1068 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 CEP63Q96MT8 703 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 CBX1P83916 185 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 FMNL3Q8IVF7 1028 aa8.34□□□□□ -1.07
CSMD2-206ENST00000373388 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.34□□□□□ -1.07
CSMD2-206ENST00000373388 FILIP1LQ4L180 1135 aa8.34□□□□□ -1.08
CSMD2-206ENST00000373388 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.08
CSMD2-206ENST00000373388 SPAG9O60271 1321 aaKnown RBP8.33□□□□□ -1.08
CSMD2-206ENST00000373388 TNNT1P13805 278 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 OFD1O75665 1012 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 CCDC50Q8IVM0 306 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 SMC3Q9UQE7 1217 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 HSP90AB2PQ58FF8 381 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 FMNL2Q96PY5 1086 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 GOLIM4O00461 696 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 ZSCAN12O43309 604 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 GTF2F1P35269 517 aaKnown RBP eCLIP8.33□□□□□ -1.08
CSMD2-206ENST00000373388 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 C6orf163Q5TEZ5 329 aa8.33□□□□□ -1.08
CSMD2-206ENST00000373388 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
CSMD2-206ENST00000373388 CEP83Q9Y592 693 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms