RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 EXOSC9Q06265 439 aaKnown RBP16.92■□□□□ 0.3
NCDN-203ENST00000373253 MAST1Q9Y2H9 1570 aa16.92■□□□□ 0.3
NCDN-203ENST00000373253 YEATS2Q9ULM3 1422 aa16.91■□□□□ 0.3
NCDN-203ENST00000373253 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
NCDN-203ENST00000373253 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
NCDN-203ENST00000373253 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
NCDN-203ENST00000373253 NME9Q86XW9 330 aa16.9■□□□□ 0.3
NCDN-203ENST00000373253 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
NCDN-203ENST00000373253 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
NCDN-203ENST00000373253 ABCC1P33527 1531 aa16.9■□□□□ 0.3
NCDN-203ENST00000373253 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
NCDN-203ENST00000373253 NPATQ14207 1427 aa16.89■□□□□ 0.29
NCDN-203ENST00000373253 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
NCDN-203ENST00000373253 DCTN1Q14203 1278 aa16.89■□□□□ 0.29
NCDN-203ENST00000373253 SLKQ9H2G2 1235 aaPredicted RBP16.89■□□□□ 0.29
NCDN-203ENST00000373253 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
NCDN-203ENST00000373253 COG3Q96JB2 828 aa16.88■□□□□ 0.29
NCDN-203ENST00000373253 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
NCDN-203ENST00000373253 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
NCDN-203ENST00000373253 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
NCDN-203ENST00000373253 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
NCDN-203ENST00000373253 HDGFP51858 240 aaKnown RBP16.86■□□□□ 0.29
NCDN-203ENST00000373253 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
NCDN-203ENST00000373253 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
NCDN-203ENST00000373253 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
NCDN-203ENST00000373253 FYB1O15117 783 aa16.84■□□□□ 0.29
NCDN-203ENST00000373253 CENPQQ7L2Z9 268 aaPredicted RBP16.84■□□□□ 0.29
NCDN-203ENST00000373253 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
NCDN-203ENST00000373253 SLC4A10Q6U841 1118 aa16.82■□□□□ 0.28
NCDN-203ENST00000373253 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
NCDN-203ENST00000373253 AMPHP49418 695 aa16.82■□□□□ 0.28
NCDN-203ENST00000373253 HSP90AA1P07900 732 aaKnown RBP16.81■□□□□ 0.28
NCDN-203ENST00000373253 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
NCDN-203ENST00000373253 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
NCDN-203ENST00000373253 NUDT16Q96DE0 195 aaKnown RBP16.81■□□□□ 0.28
NCDN-203ENST00000373253 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
NCDN-203ENST00000373253 PRDM15P57071 1507 aaPredicted RBP16.81■□□□□ 0.28
NCDN-203ENST00000373253 ZFYVE16Q7Z3T8 1539 aa16.8■□□□□ 0.28
NCDN-203ENST00000373253 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
NCDN-203ENST00000373253 IGHDP01880 384 aa16.8■□□□□ 0.28
NCDN-203ENST00000373253 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
NCDN-203ENST00000373253 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
NCDN-203ENST00000373253 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
NCDN-203ENST00000373253 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
NCDN-203ENST00000373253 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
NCDN-203ENST00000373253 BACH2Q9BYV9 841 aa16.79■□□□□ 0.28
NCDN-203ENST00000373253 RLBP1P12271 317 aa16.78■□□□□ 0.28
NCDN-203ENST00000373253 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
NCDN-203ENST00000373253 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
NCDN-203ENST00000373253 POGZQ7Z3K3 1410 aa16.78■□□□□ 0.28
NCDN-203ENST00000373253 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
NCDN-203ENST00000373253 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.28
NCDN-203ENST00000373253 LNPKQ9C0E8 428 aa16.77■□□□□ 0.28
NCDN-203ENST00000373253 RWDD1Q9H446 243 aaPredicted RBP16.77■□□□□ 0.28
NCDN-203ENST00000373253 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
NCDN-203ENST00000373253 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
NCDN-203ENST00000373253 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
NCDN-203ENST00000373253 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
NCDN-203ENST00000373253 A0A0G2JS52 829 aa16.75■□□□□ 0.27
NCDN-203ENST00000373253 PNNQ9H307 717 aaKnown RBP16.75■□□□□ 0.27
NCDN-203ENST00000373253 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
NCDN-203ENST00000373253 NLRP6P59044 892 aa16.75■□□□□ 0.27
NCDN-203ENST00000373253 TSPOAP1O95153 1857 aa16.75■□□□□ 0.27
NCDN-203ENST00000373253 DDRGK1Q96HY6 314 aa16.74■□□□□ 0.27
NCDN-203ENST00000373253 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
NCDN-203ENST00000373253 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
NCDN-203ENST00000373253 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
NCDN-203ENST00000373253 TRPM1Q7Z4N2 1603 aa16.73■□□□□ 0.27
NCDN-203ENST00000373253 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
NCDN-203ENST00000373253 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
NCDN-203ENST00000373253 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
NCDN-203ENST00000373253 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
NCDN-203ENST00000373253 MCM10Q7L590 875 aa16.73■□□□□ 0.27
NCDN-203ENST00000373253 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
NCDN-203ENST00000373253 PDZRN3Q9UPQ7 1066 aa16.72■□□□□ 0.27
NCDN-203ENST00000373253 WASLO00401 505 aaPredicted RBP16.72■□□□□ 0.27
NCDN-203ENST00000373253 E9PCH4 1651 aa16.72■□□□□ 0.27
NCDN-203ENST00000373253 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
NCDN-203ENST00000373253 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
NCDN-203ENST00000373253 PTPRTO14522 1441 aa16.72■□□□□ 0.27
NCDN-203ENST00000373253 AEBP1Q8IUX7 1158 aa16.72■□□□□ 0.27
NCDN-203ENST00000373253 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
NCDN-203ENST00000373253 RNF123Q5XPI4 1314 aa16.71■□□□□ 0.26
NCDN-203ENST00000373253 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
NCDN-203ENST00000373253 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
NCDN-203ENST00000373253 TMEM57Q8N5G2 664 aa16.69■□□□□ 0.26
NCDN-203ENST00000373253 TRPM2O94759 1503 aa16.69■□□□□ 0.26
NCDN-203ENST00000373253 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
NCDN-203ENST00000373253 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
NCDN-203ENST00000373253 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 UNC13BO14795 1591 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
NCDN-203ENST00000373253 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
NCDN-203ENST00000373253 MS4A1P11836 297 aa16.67■□□□□ 0.26
NCDN-203ENST00000373253 ANKRD36BQ8N2N9 1353 aa16.67■□□□□ 0.26
NCDN-203ENST00000373253 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms