RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
TRAPPC3-203ENST00000373163 ESCO1Q5FWF5 840 aa24.1■■□□□ 1.45
TRAPPC3-203ENST00000373163 DEFB132Q7Z7B7 95 aa24.1■■□□□ 1.45
TRAPPC3-203ENST00000373163 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
TRAPPC3-203ENST00000373163 PXDNQ92626 1479 aa24.09■■□□□ 1.45
TRAPPC3-203ENST00000373163 HFM1A2PYH4 1435 aa24.08■■□□□ 1.44
TRAPPC3-203ENST00000373163 RALGAPBQ86X10 1494 aa24.07■■□□□ 1.44
TRAPPC3-203ENST00000373163 CLTCL1P53675 1640 aa24.07■■□□□ 1.44
TRAPPC3-203ENST00000373163 XPCQ01831 940 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC3-203ENST00000373163 SF3B2Q13435 895 aaKnown RBP24.07■■□□□ 1.44
TRAPPC3-203ENST00000373163 UNC5CLQ8IV45 518 aa24.07■■□□□ 1.44
TRAPPC3-203ENST00000373163 VGFO15240 615 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC3-203ENST00000373163 FOXO3O43524 673 aa24.05■■□□□ 1.44
TRAPPC3-203ENST00000373163 ITGAEP38570 1179 aa24.05■■□□□ 1.44
TRAPPC3-203ENST00000373163 GLI3P10071 1580 aa24.03■■□□□ 1.44
TRAPPC3-203ENST00000373163 LRP5O75197 1615 aa24.03■■□□□ 1.44
TRAPPC3-203ENST00000373163 SLIT2O94813 1529 aa24.03■■□□□ 1.44
TRAPPC3-203ENST00000373163 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
TRAPPC3-203ENST00000373163 MARF1Q9Y4F3 1742 aaKnown RBP24.02■■□□□ 1.44
TRAPPC3-203ENST00000373163 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.01■■□□□ 1.43
TRAPPC3-203ENST00000373163 CDC42BPGQ6DT37 1551 aa24.01■■□□□ 1.43
TRAPPC3-203ENST00000373163 SEPT12Q8IYM1 358 aa23.99■■□□□ 1.43
TRAPPC3-203ENST00000373163 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
TRAPPC3-203ENST00000373163 NAIPQ13075 1403 aa23.94■■□□□ 1.42
TRAPPC3-203ENST00000373163 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
TRAPPC3-203ENST00000373163 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
TRAPPC3-203ENST00000373163 PSDA5PKW4 1024 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC3-203ENST00000373163 VPS72Q15906 364 aa23.93■■□□□ 1.42
TRAPPC3-203ENST00000373163 KIF1BO60333 1816 aa23.93■■□□□ 1.42
TRAPPC3-203ENST00000373163 HRCP23327 699 aa23.92■■□□□ 1.42
TRAPPC3-203ENST00000373163 KRT27Q7Z3Y8 459 aa23.92■■□□□ 1.42
TRAPPC3-203ENST00000373163 USP32Q8NFA0 1604 aa23.92■■□□□ 1.42
TRAPPC3-203ENST00000373163 CCDC9Q9Y3X0 531 aaKnown RBP23.91■■□□□ 1.42
TRAPPC3-203ENST00000373163 BRWD3Q6RI45 1802 aa23.9■■□□□ 1.42
TRAPPC3-203ENST00000373163 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC3-203ENST00000373163 BAG6P46379 1132 aa23.9■■□□□ 1.42
TRAPPC3-203ENST00000373163 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC3-203ENST00000373163 CCDC144AA2RUR9 1427 aa23.9■■□□□ 1.42
TRAPPC3-203ENST00000373163 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
TRAPPC3-203ENST00000373163 KRT28Q7Z3Y7 464 aa23.86■■□□□ 1.41
TRAPPC3-203ENST00000373163 STK26Q9P289 416 aa23.86■■□□□ 1.41
TRAPPC3-203ENST00000373163 TECPR2O15040 1411 aa23.84■■□□□ 1.41
TRAPPC3-203ENST00000373163 A0A0G2JS52 829 aa23.84■■□□□ 1.41
TRAPPC3-203ENST00000373163 MYT1Q01538 1121 aa23.84■■□□□ 1.41
TRAPPC3-203ENST00000373163 CABLES1Q8TDN4 633 aa23.84■■□□□ 1.41
TRAPPC3-203ENST00000373163 TNS3Q68CZ2 1445 aa23.83■■□□□ 1.4
TRAPPC3-203ENST00000373163 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
TRAPPC3-203ENST00000373163 KIF1AQ12756 1690 aa23.82■■□□□ 1.4
TRAPPC3-203ENST00000373163 PLEKHH1Q9ULM0 1364 aa23.81■■□□□ 1.4
TRAPPC3-203ENST00000373163 PPLO60437 1756 aa23.8■■□□□ 1.4
TRAPPC3-203ENST00000373163 EN1Q05925 392 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC3-203ENST00000373163 PSME1Q06323 249 aa23.79■■□□□ 1.4
TRAPPC3-203ENST00000373163 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
TRAPPC3-203ENST00000373163 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
TRAPPC3-203ENST00000373163 R3HDM1Q15032 1099 aaKnown RBP23.78■■□□□ 1.4
TRAPPC3-203ENST00000373163 PLCH1Q4KWH8 1693 aa23.78■■□□□ 1.4
TRAPPC3-203ENST00000373163 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
TRAPPC3-203ENST00000373163 FMN2Q9NZ56 1722 aa23.77■■□□□ 1.4
TRAPPC3-203ENST00000373163 FAM98CQ17RN3 349 aaKnown RBP23.77■■□□□ 1.4
TRAPPC3-203ENST00000373163 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
TRAPPC3-203ENST00000373163 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
TRAPPC3-203ENST00000373163 PHF8Q9UPP1 1060 aa23.76■■□□□ 1.39
TRAPPC3-203ENST00000373163 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
TRAPPC3-203ENST00000373163 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
TRAPPC3-203ENST00000373163 SBNO1A3KN83 1393 aa23.75■■□□□ 1.39
TRAPPC3-203ENST00000373163 ARHGEF10O15013 1369 aa23.75■■□□□ 1.39
TRAPPC3-203ENST00000373163 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
TRAPPC3-203ENST00000373163 DISP2A7MBM2 1401 aa23.7■■□□□ 1.38
TRAPPC3-203ENST00000373163 FAM182BQ5T319 152 aa23.7■■□□□ 1.38
TRAPPC3-203ENST00000373163 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
TRAPPC3-203ENST00000373163 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.38
TRAPPC3-203ENST00000373163 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
TRAPPC3-203ENST00000373163 ABCA3Q99758 1704 aa23.69■■□□□ 1.38
TRAPPC3-203ENST00000373163 YTHDC2Q9H6S0 1430 aaKnown RBP23.68■■□□□ 1.38
TRAPPC3-203ENST00000373163 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
TRAPPC3-203ENST00000373163 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
TRAPPC3-203ENST00000373163 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
TRAPPC3-203ENST00000373163 RGPD1P0DJD0 1748 aa23.67■■□□□ 1.38
TRAPPC3-203ENST00000373163 YY1P25490 414 aa23.67■■□□□ 1.38
TRAPPC3-203ENST00000373163 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
TRAPPC3-203ENST00000373163 SIRT1Q96EB6 747 aa23.66■■□□□ 1.38
TRAPPC3-203ENST00000373163 NRAPQ86VF7 1730 aa23.66■■□□□ 1.38
TRAPPC3-203ENST00000373163 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
TRAPPC3-203ENST00000373163 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
TRAPPC3-203ENST00000373163 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
TRAPPC3-203ENST00000373163 SPATA31E1Q6ZUB1 1445 aa23.63■■□□□ 1.37
TRAPPC3-203ENST00000373163 IFT172Q9UG01 1749 aa23.62■■□□□ 1.37
TRAPPC3-203ENST00000373163 PMFBP1Q8TBY8 1022 aa23.61■■□□□ 1.37
TRAPPC3-203ENST00000373163 CAMKK2Q96RR4 588 aa23.61■■□□□ 1.37
TRAPPC3-203ENST00000373163 ADGRB2O60241 1585 aa23.59■■□□□ 1.37
TRAPPC3-203ENST00000373163 TNS1Q9HBL0 1735 aaKnown RBP23.59■■□□□ 1.37
TRAPPC3-203ENST00000373163 RGPD8O14715 1765 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC3-203ENST00000373163 COL14A1Q05707 1796 aaKnown RBP23.58■■□□□ 1.37
TRAPPC3-203ENST00000373163 TRIM37O94972 964 aa23.58■■□□□ 1.37
TRAPPC3-203ENST00000373163 SAFB2Q14151 953 aaKnown RBP eCLIP23.58■■□□□ 1.37
TRAPPC3-203ENST00000373163 THSD7AQ9UPZ6 1657 aa23.57■■□□□ 1.36
TRAPPC3-203ENST00000373163 ANKARQ7Z5J8 1434 aa23.57■■□□□ 1.36
TRAPPC3-203ENST00000373163 PARD3Q8TEW0 1356 aa23.56■■□□□ 1.36
TRAPPC3-203ENST00000373163 FAM196AQ6ZSG2 479 aa23.56■■□□□ 1.36
TRAPPC3-203ENST00000373163 PRAM1Q96QH2 718 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 498.4 ms