RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
GRIK3-202ENST00000373093 ZFYVE16Q7Z3T8 1539 aa13.97□□□□□ -0.17
GRIK3-202ENST00000373093 PTPRTO14522 1441 aa13.97□□□□□ -0.17
GRIK3-202ENST00000373093 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
GRIK3-202ENST00000373093 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
GRIK3-202ENST00000373093 TRPM2O94759 1503 aa13.96□□□□□ -0.18
GRIK3-202ENST00000373093 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
GRIK3-202ENST00000373093 IQGAP1P46940 1657 aa13.95□□□□□ -0.18
GRIK3-202ENST00000373093 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
GRIK3-202ENST00000373093 INSRP06213 1382 aa13.94□□□□□ -0.18
GRIK3-202ENST00000373093 MYOM1P52179 1685 aa13.94□□□□□ -0.18
GRIK3-202ENST00000373093 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
GRIK3-202ENST00000373093 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
GRIK3-202ENST00000373093 LAMC1P11047 1609 aa13.93□□□□□ -0.18
GRIK3-202ENST00000373093 SYNMO15061 1565 aa13.93□□□□□ -0.18
GRIK3-202ENST00000373093 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
GRIK3-202ENST00000373093 ATP7AQ04656 1500 aa13.93□□□□□ -0.18
GRIK3-202ENST00000373093 BECN1Q14457 450 aa13.92□□□□□ -0.18
GRIK3-202ENST00000373093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
GRIK3-202ENST00000373093 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
GRIK3-202ENST00000373093 FOXD4L1Q9NU39 408 aa13.92□□□□□ -0.18
GRIK3-202ENST00000373093 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
GRIK3-202ENST00000373093 FTSJ3Q8IY81 847 aaKnown RBP13.92□□□□□ -0.18
GRIK3-202ENST00000373093 CGNL1Q0VF96 1302 aa13.92□□□□□ -0.18
GRIK3-202ENST00000373093 FAM43AQ8N2R8 423 aa13.92□□□□□ -0.18
GRIK3-202ENST00000373093 NAP1L5Q96NT1 182 aaPredicted RBP13.92□□□□□ -0.18
GRIK3-202ENST00000373093 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
GRIK3-202ENST00000373093 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
GRIK3-202ENST00000373093 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
GRIK3-202ENST00000373093 ITPRIPQ8IWB1 547 aa13.91□□□□□ -0.18
GRIK3-202ENST00000373093 C14orf93Q9H972 538 aaKnown RBP13.91□□□□□ -0.18
GRIK3-202ENST00000373093 XRCC6P12956 609 aaKnown RBP eCLIP13.9□□□□□ -0.18
GRIK3-202ENST00000373093 PDE3AQ14432 1141 aa13.9□□□□□ -0.18
GRIK3-202ENST00000373093 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
GRIK3-202ENST00000373093 IDI1Q13907 227 aa13.89□□□□□ -0.19
GRIK3-202ENST00000373093 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
GRIK3-202ENST00000373093 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
GRIK3-202ENST00000373093 KDM5AP29375 1690 aaKnown RBP13.89□□□□□ -0.19
GRIK3-202ENST00000373093 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
GRIK3-202ENST00000373093 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
GRIK3-202ENST00000373093 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
GRIK3-202ENST00000373093 UPF2Q9HAU5 1272 aaKnown RBP13.89□□□□□ -0.19
GRIK3-202ENST00000373093 HMOX1P09601 288 aa13.88□□□□□ -0.19
GRIK3-202ENST00000373093 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
GRIK3-202ENST00000373093 MLECQ14165 292 aa13.88□□□□□ -0.19
GRIK3-202ENST00000373093 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
GRIK3-202ENST00000373093 NPATQ14207 1427 aa13.87□□□□□ -0.19
GRIK3-202ENST00000373093 POLR3AO14802 1390 aaPredicted RBP13.87□□□□□ -0.19
GRIK3-202ENST00000373093 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
GRIK3-202ENST00000373093 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
GRIK3-202ENST00000373093 CEP152O94986 1710 aa13.87□□□□□ -0.19
GRIK3-202ENST00000373093 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
GRIK3-202ENST00000373093 TRIM27P14373 513 aa13.86□□□□□ -0.19
GRIK3-202ENST00000373093 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
GRIK3-202ENST00000373093 RIPK4P57078 832 aa13.86□□□□□ -0.19
GRIK3-202ENST00000373093 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
GRIK3-202ENST00000373093 MAP3K4Q9Y6R4 1608 aa13.86□□□□□ -0.19
GRIK3-202ENST00000373093 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
GRIK3-202ENST00000373093 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
GRIK3-202ENST00000373093 TBC1D32Q96NH3 1257 aa13.85□□□□□ -0.19
GRIK3-202ENST00000373093 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 MAPK8IP3Q9UPT6 1336 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 WAPLQ7Z5K2 1190 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 TMEM57Q8N5G2 664 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
GRIK3-202ENST00000373093 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
GRIK3-202ENST00000373093 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 TET3O43151 1660 aa13.84□□□□□ -0.19
GRIK3-202ENST00000373093 STAC3Q96MF2 364 aa13.83□□□□□ -0.19
GRIK3-202ENST00000373093 MCM4P33991 863 aa13.83□□□□□ -0.2
GRIK3-202ENST00000373093 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
GRIK3-202ENST00000373093 FYB1O15117 783 aa13.83□□□□□ -0.2
GRIK3-202ENST00000373093 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
GRIK3-202ENST00000373093 MROH1Q8NDA8 1641 aa13.82□□□□□ -0.2
GRIK3-202ENST00000373093 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
GRIK3-202ENST00000373093 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
GRIK3-202ENST00000373093 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
GRIK3-202ENST00000373093 MYH16Q9H6N6 1097 aa13.82□□□□□ -0.2
GRIK3-202ENST00000373093 TRAK2O60296 914 aa13.82□□□□□ -0.2
GRIK3-202ENST00000373093 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
GRIK3-202ENST00000373093 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
GRIK3-202ENST00000373093 SOX12O15370 315 aa13.81□□□□□ -0.2
GRIK3-202ENST00000373093 WDR63Q8IWG1 891 aa13.81□□□□□ -0.2
GRIK3-202ENST00000373093 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
GRIK3-202ENST00000373093 PNNQ9H307 717 aaKnown RBP13.8□□□□□ -0.2
GRIK3-202ENST00000373093 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
GRIK3-202ENST00000373093 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
GRIK3-202ENST00000373093 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
GRIK3-202ENST00000373093 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
GRIK3-202ENST00000373093 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
GRIK3-202ENST00000373093 TSPYL6Q8N831 410 aa13.8□□□□□ -0.2
GRIK3-202ENST00000373093 PHACTR3Q96KR7 559 aa13.8□□□□□ -0.2
GRIK3-202ENST00000373093 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
GRIK3-202ENST00000373093 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
GRIK3-202ENST00000373093 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms