RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 CABP2Q9NPB3 220 aa24.7■■□□□ 1.54
USP49-202ENST00000373010 POLR3AO14802 1390 aaPredicted RBP24.69■■□□□ 1.54
USP49-202ENST00000373010 ANP32EQ9BTT0 268 aa24.69■■□□□ 1.54
USP49-202ENST00000373010 USP32Q8NFA0 1604 aa24.67■■□□□ 1.54
USP49-202ENST00000373010 SLFN5Q08AF3 891 aa24.67■■□□□ 1.54
USP49-202ENST00000373010 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
USP49-202ENST00000373010 CRBNQ96SW2 442 aa24.66■■□□□ 1.54
USP49-202ENST00000373010 SHPRHQ149N8 1683 aa24.65■■□□□ 1.54
USP49-202ENST00000373010 CGNL1Q0VF96 1302 aa24.65■■□□□ 1.54
USP49-202ENST00000373010 SPINK5Q9NQ38 1064 aaPredicted RBP24.65■■□□□ 1.54
USP49-202ENST00000373010 C20orf194Q5TEA3 1177 aa24.64■■□□□ 1.54
USP49-202ENST00000373010 CLTCQ00610 1675 aaKnown RBP24.64■■□□□ 1.53
USP49-202ENST00000373010 ANKRD36BQ8N2N9 1353 aa24.64■■□□□ 1.53
USP49-202ENST00000373010 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
USP49-202ENST00000373010 STAG3Q9UJ98 1225 aa24.62■■□□□ 1.53
USP49-202ENST00000373010 AGLP35573 1532 aa24.62■■□□□ 1.53
USP49-202ENST00000373010 PTPRMP28827 1452 aa24.62■■□□□ 1.53
USP49-202ENST00000373010 TRMT2AQ8IZ69 625 aaKnown RBP24.62■■□□□ 1.53
USP49-202ENST00000373010 MLECQ14165 292 aa24.61■■□□□ 1.53
USP49-202ENST00000373010 SRPK2P78362 688 aaKnown RBP24.6■■□□□ 1.53
USP49-202ENST00000373010 MYT1Q01538 1121 aa24.6■■□□□ 1.53
USP49-202ENST00000373010 PRAM1Q96QH2 718 aa24.6■■□□□ 1.53
USP49-202ENST00000373010 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
USP49-202ENST00000373010 YTHDC2Q9H6S0 1430 aaKnown RBP24.6■■□□□ 1.53
USP49-202ENST00000373010 MINK1Q8N4C8 1332 aaPredicted RBP24.6■■□□□ 1.53
USP49-202ENST00000373010 MTHFSP49914 203 aa24.59■■□□□ 1.53
USP49-202ENST00000373010 ALKQ9UM73 1620 aa24.58■■□□□ 1.53
USP49-202ENST00000373010 POGKQ9P215 609 aa24.57■■□□□ 1.52
USP49-202ENST00000373010 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
USP49-202ENST00000373010 A0A1W2PP64 1363 aa24.56■■□□□ 1.52
USP49-202ENST00000373010 E9PSI1 815 aa24.54■■□□□ 1.52
USP49-202ENST00000373010 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
USP49-202ENST00000373010 NSD2O96028 1365 aa24.54■■□□□ 1.52
USP49-202ENST00000373010 NGEFQ8N5V2 710 aa24.53■■□□□ 1.52
USP49-202ENST00000373010 SPATA31D1Q6ZQQ2 1576 aa24.52■■□□□ 1.52
USP49-202ENST00000373010 A2ML1A8K2U0 1454 aa24.52■■□□□ 1.52
USP49-202ENST00000373010 WWC1Q8IX03 1113 aa24.52■■□□□ 1.52
USP49-202ENST00000373010 NEUROD2Q15784 382 aa24.52■■□□□ 1.52
USP49-202ENST00000373010 RUNDC1Q96C34 613 aa24.52■■□□□ 1.52
USP49-202ENST00000373010 CFAP53Q96M91 514 aa24.52■■□□□ 1.52
USP49-202ENST00000373010 RRP7AQ9Y3A4 280 aaKnown RBP24.52■■□□□ 1.52
USP49-202ENST00000373010 KIF13AQ9H1H9 1805 aa24.52■■□□□ 1.51
USP49-202ENST00000373010 NINLQ9Y2I6 1382 aa24.51■■□□□ 1.51
USP49-202ENST00000373010 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
USP49-202ENST00000373010 ATAD2Q6PL18 1390 aa24.49■■□□□ 1.51
USP49-202ENST00000373010 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.49■■□□□ 1.51
USP49-202ENST00000373010 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
USP49-202ENST00000373010 GGNBP2Q9H3C7 697 aa24.49■■□□□ 1.51
USP49-202ENST00000373010 ARHGEF40Q8TER5 1519 aa24.48■■□□□ 1.51
USP49-202ENST00000373010 RIMS2Q9UQ26 1411 aa24.48■■□□□ 1.51
USP49-202ENST00000373010 BCAR3O75815 825 aa24.48■■□□□ 1.51
USP49-202ENST00000373010 IQSEC2Q5JU85 1478 aa24.48■■□□□ 1.51
USP49-202ENST00000373010 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
USP49-202ENST00000373010 CDK19Q9BWU1 502 aa24.47■■□□□ 1.51
USP49-202ENST00000373010 CD163L1Q9NR16 1453 aa24.47■■□□□ 1.51
USP49-202ENST00000373010 SKAP1Q86WV1 359 aa24.45■■□□□ 1.51
USP49-202ENST00000373010 TERF2IPQ9NYB0 399 aa24.45■■□□□ 1.51
USP49-202ENST00000373010 WAPLQ7Z5K2 1190 aa24.44■■□□□ 1.5
USP49-202ENST00000373010 SETD1AO15047 1707 aaKnown RBP24.43■■□□□ 1.5
USP49-202ENST00000373010 FYB1O15117 783 aa24.43■■□□□ 1.5
USP49-202ENST00000373010 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
USP49-202ENST00000373010 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
USP49-202ENST00000373010 ERICH6Q7L0X2 663 aa24.41■■□□□ 1.5
USP49-202ENST00000373010 CABP1Q9NZU7 370 aa24.41■■□□□ 1.5
USP49-202ENST00000373010 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
USP49-202ENST00000373010 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
USP49-202ENST00000373010 NLRP1Q9C000 1473 aa24.4■■□□□ 1.5
USP49-202ENST00000373010 KDM2BQ8NHM5 1336 aa24.4■■□□□ 1.5
USP49-202ENST00000373010 ZMYM3Q14202 1370 aa24.39■■□□□ 1.5
USP49-202ENST00000373010 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.5
USP49-202ENST00000373010 ESF1Q9H501 851 aaKnown RBP24.39■■□□□ 1.5
USP49-202ENST00000373010 DLC1Q96QB1 1528 aa24.38■■□□□ 1.49
USP49-202ENST00000373010 PDE4AP27815 886 aa24.37■■□□□ 1.49
USP49-202ENST00000373010 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
USP49-202ENST00000373010 MS4A1P11836 297 aa24.36■■□□□ 1.49
USP49-202ENST00000373010 COL3A1P02461 1466 aaPredicted RBP24.36■■□□□ 1.49
USP49-202ENST00000373010 WDR63Q8IWG1 891 aa24.35■■□□□ 1.49
USP49-202ENST00000373010 MED14O60244 1454 aa24.35■■□□□ 1.49
USP49-202ENST00000373010 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
USP49-202ENST00000373010 ANP32AP39687 249 aaKnown RBP24.34■■□□□ 1.49
USP49-202ENST00000373010 CCDC27Q2M243 656 aa24.34■■□□□ 1.49
USP49-202ENST00000373010 KIF20BQ96Q89 1820 aa24.34■■□□□ 1.49
USP49-202ENST00000373010 CENPQQ7L2Z9 268 aaPredicted RBP24.34■■□□□ 1.49
USP49-202ENST00000373010 METP08581 1390 aa24.33■■□□□ 1.49
USP49-202ENST00000373010 ADGRB2O60241 1585 aa24.33■■□□□ 1.49
USP49-202ENST00000373010 BACH2Q9BYV9 841 aa24.33■■□□□ 1.48
USP49-202ENST00000373010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.31■■□□□ 1.48
USP49-202ENST00000373010 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.31■■□□□ 1.48
USP49-202ENST00000373010 CANXP27824 592 aaKnown RBP24.3■■□□□ 1.48
USP49-202ENST00000373010 RARSP54136 660 aaKnown RBP24.29■■□□□ 1.48
USP49-202ENST00000373010 TXNDC2Q86VQ3 553 aa24.29■■□□□ 1.48
USP49-202ENST00000373010 PLEKHF1Q96S99 279 aa24.29■■□□□ 1.48
USP49-202ENST00000373010 PANK1Q8TE04 598 aa24.29■■□□□ 1.48
USP49-202ENST00000373010 NOP58Q9Y2X3 529 aaKnown RBP24.29■■□□□ 1.48
USP49-202ENST00000373010 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
USP49-202ENST00000373010 IPO9Q96P70 1041 aaKnown RBP24.28■■□□□ 1.48
USP49-202ENST00000373010 TNRQ92752 1358 aa24.28■■□□□ 1.48
USP49-202ENST00000373010 PDE3AQ14432 1141 aa24.27■■□□□ 1.48
USP49-202ENST00000373010 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
USP49-202ENST00000373010 FRAT1Q92837 279 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms