RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
CSTF2-201ENST00000372972 EVC2Q86UK5 1308 aa17.85■□□□□ 0.45
CSTF2-201ENST00000372972 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
CSTF2-201ENST00000372972 NLRP1Q9C000 1473 aa17.84■□□□□ 0.45
CSTF2-201ENST00000372972 YTHDC2Q9H6S0 1430 aaKnown RBP17.83■□□□□ 0.45
CSTF2-201ENST00000372972 SLC12A5Q9H2X9 1139 aa17.83■□□□□ 0.44
CSTF2-201ENST00000372972 PTPRMP28827 1452 aa17.82■□□□□ 0.44
CSTF2-201ENST00000372972 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
CSTF2-201ENST00000372972 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
CSTF2-201ENST00000372972 SETD1AO15047 1707 aaKnown RBP17.81■□□□□ 0.44
CSTF2-201ENST00000372972 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
CSTF2-201ENST00000372972 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
CSTF2-201ENST00000372972 NSD3Q9BZ95 1437 aa17.79■□□□□ 0.44
CSTF2-201ENST00000372972 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
CSTF2-201ENST00000372972 CDCA7LQ96GN5 454 aa17.77■□□□□ 0.44
CSTF2-201ENST00000372972 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
CSTF2-201ENST00000372972 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.43
CSTF2-201ENST00000372972 RIMS1Q86UR5 1692 aaKnown RBP17.76■□□□□ 0.43
CSTF2-201ENST00000372972 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
CSTF2-201ENST00000372972 POGKQ9P215 609 aa17.76■□□□□ 0.43
CSTF2-201ENST00000372972 B4GALNT3Q6L9W6 998 aa17.75■□□□□ 0.43
CSTF2-201ENST00000372972 LTKP29376 864 aa17.75■□□□□ 0.43
CSTF2-201ENST00000372972 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
CSTF2-201ENST00000372972 METP08581 1390 aa17.74■□□□□ 0.43
CSTF2-201ENST00000372972 CGNL1Q0VF96 1302 aa17.74■□□□□ 0.43
CSTF2-201ENST00000372972 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
CSTF2-201ENST00000372972 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
CSTF2-201ENST00000372972 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
CSTF2-201ENST00000372972 DLC1Q96QB1 1528 aa17.73■□□□□ 0.43
CSTF2-201ENST00000372972 ADAMTSL3P82987 1691 aa17.73■□□□□ 0.43
CSTF2-201ENST00000372972 MINK1Q8N4C8 1332 aaPredicted RBP17.73■□□□□ 0.43
CSTF2-201ENST00000372972 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
CSTF2-201ENST00000372972 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
CSTF2-201ENST00000372972 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
CSTF2-201ENST00000372972 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
CSTF2-201ENST00000372972 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
CSTF2-201ENST00000372972 SLIT1O75093 1534 aa17.71■□□□□ 0.43
CSTF2-201ENST00000372972 PLEKHG1Q9ULL1 1385 aa17.71■□□□□ 0.43
CSTF2-201ENST00000372972 ARHGAP23Q9P227 1491 aa17.71■□□□□ 0.43
CSTF2-201ENST00000372972 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
CSTF2-201ENST00000372972 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
CSTF2-201ENST00000372972 EID1Q9Y6B2 187 aa17.7■□□□□ 0.42
CSTF2-201ENST00000372972 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
CSTF2-201ENST00000372972 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
CSTF2-201ENST00000372972 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
CSTF2-201ENST00000372972 NSD2O96028 1365 aa17.7■□□□□ 0.42
CSTF2-201ENST00000372972 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
CSTF2-201ENST00000372972 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
CSTF2-201ENST00000372972 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
CSTF2-201ENST00000372972 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
CSTF2-201ENST00000372972 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
CSTF2-201ENST00000372972 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
CSTF2-201ENST00000372972 KNDC1Q76NI1 1749 aa17.66■□□□□ 0.42
CSTF2-201ENST00000372972 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
CSTF2-201ENST00000372972 APAF1O14727 1248 aa17.66■□□□□ 0.42
CSTF2-201ENST00000372972 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
CSTF2-201ENST00000372972 TECPR2O15040 1411 aa17.65■□□□□ 0.42
CSTF2-201ENST00000372972 MED14O60244 1454 aa17.65■□□□□ 0.42
CSTF2-201ENST00000372972 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
CSTF2-201ENST00000372972 RBM19Q9Y4C8 960 aaKnown RBP17.65■□□□□ 0.42
CSTF2-201ENST00000372972 A0A1W2PP64 1363 aa17.65■□□□□ 0.42
CSTF2-201ENST00000372972 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
CSTF2-201ENST00000372972 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
CSTF2-201ENST00000372972 MTHFSP49914 203 aa17.64■□□□□ 0.41
CSTF2-201ENST00000372972 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
CSTF2-201ENST00000372972 SLC26A8Q96RN1 970 aa17.64■□□□□ 0.41
CSTF2-201ENST00000372972 CPS1P31327 1500 aa17.63■□□□□ 0.41
CSTF2-201ENST00000372972 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
CSTF2-201ENST00000372972 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
CSTF2-201ENST00000372972 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
CSTF2-201ENST00000372972 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
CSTF2-201ENST00000372972 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
CSTF2-201ENST00000372972 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
CSTF2-201ENST00000372972 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
CSTF2-201ENST00000372972 PTPRUQ92729 1446 aa17.59■□□□□ 0.41
CSTF2-201ENST00000372972 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
CSTF2-201ENST00000372972 CD163L1Q9NR16 1453 aa17.59■□□□□ 0.41
CSTF2-201ENST00000372972 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
CSTF2-201ENST00000372972 CABP1Q9NZU7 370 aa17.59■□□□□ 0.41
CSTF2-201ENST00000372972 SETD1BQ9UPS6 1966 aaKnown RBP17.58■□□□□ 0.41
CSTF2-201ENST00000372972 SHPRHQ149N8 1683 aa17.58■□□□□ 0.41
CSTF2-201ENST00000372972 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
CSTF2-201ENST00000372972 E9PSI1 815 aa17.57■□□□□ 0.4
CSTF2-201ENST00000372972 FYB1O15117 783 aa17.57■□□□□ 0.4
CSTF2-201ENST00000372972 PLIN1O60240 522 aa17.57■□□□□ 0.4
CSTF2-201ENST00000372972 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
CSTF2-201ENST00000372972 DIP2AQ14689 1571 aa17.56■□□□□ 0.4
CSTF2-201ENST00000372972 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
CSTF2-201ENST00000372972 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
CSTF2-201ENST00000372972 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
CSTF2-201ENST00000372972 ANKLE2Q86XL3 938 aa17.54■□□□□ 0.4
CSTF2-201ENST00000372972 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
CSTF2-201ENST00000372972 NKTRP30414 1462 aaKnown RBP17.53■□□□□ 0.4
CSTF2-201ENST00000372972 TCP11L2Q8N4U5 519 aa17.53■□□□□ 0.4
CSTF2-201ENST00000372972 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.4
CSTF2-201ENST00000372972 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
CSTF2-201ENST00000372972 ATP7BP35670 1465 aa17.51■□□□□ 0.39
CSTF2-201ENST00000372972 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
CSTF2-201ENST00000372972 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
CSTF2-201ENST00000372972 NUDT16Q96DE0 195 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms