RNA–Protein interactions for RNA: ENST00000372277.7

TMEM254-204, Transcript of transmembrane protein 254, humanhuman

TSL 5 BASIC

Gene TMEM254, Length 366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-204ENST00000372277 CDK12Q9NYV4 1490 aaPredicted RBP21.43■■□□□ 1.02
TMEM254-204ENST00000372277 CDC42BPGQ6DT37 1551 aa21.43■■□□□ 1.02
TMEM254-204ENST00000372277 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
TMEM254-204ENST00000372277 NPHP3Q7Z494 1330 aa21.39■■□□□ 1.01
TMEM254-204ENST00000372277 IFT172Q9UG01 1749 aa21.39■■□□□ 1.01
TMEM254-204ENST00000372277 SIRT1Q96EB6 747 aa21.38■■□□□ 1.01
TMEM254-204ENST00000372277 C8orf37Q96NL8 207 aa21.38■■□□□ 1.01
TMEM254-204ENST00000372277 STK26Q9P289 416 aa21.38■■□□□ 1.01
TMEM254-204ENST00000372277 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
TMEM254-204ENST00000372277 RBM6P78332 1123 aaKnown RBP21.35■■□□□ 1.01
TMEM254-204ENST00000372277 NGLY1Q96IV0 654 aa21.35■■□□□ 1.01
TMEM254-204ENST00000372277 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
TMEM254-204ENST00000372277 YTHDC2Q9H6S0 1430 aaKnown RBP21.35■■□□□ 1.01
TMEM254-204ENST00000372277 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
TMEM254-204ENST00000372277 WAPLQ7Z5K2 1190 aa21.34■■□□□ 1.01
TMEM254-204ENST00000372277 QTRT2Q9H974 415 aaKnown RBP21.34■■□□□ 1.01
TMEM254-204ENST00000372277 KNDC1Q76NI1 1749 aa21.34■■□□□ 1.01
TMEM254-204ENST00000372277 MYOM2P54296 1465 aa21.33■■□□□ 1.01
TMEM254-204ENST00000372277 ADAMTS2O95450 1211 aa21.33■■□□□ 1.01
TMEM254-204ENST00000372277 NRXN1Q9ULB1 1477 aa21.32■■□□□ 1
TMEM254-204ENST00000372277 UPF1Q92900 1129 aaKnown RBP eCLIP21.32■■□□□ 1
TMEM254-204ENST00000372277 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
TMEM254-204ENST00000372277 COL22A1Q8NFW1 1626 aaPredicted RBP21.31■■□□□ 1
TMEM254-204ENST00000372277 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
TMEM254-204ENST00000372277 FOXO3O43524 673 aa21.3■■□□□ 1
TMEM254-204ENST00000372277 PXDNQ92626 1479 aa21.3■■□□□ 1
TMEM254-204ENST00000372277 FNBP4Q8N3X1 1017 aaPredicted RBP21.29■■□□□ 1
TMEM254-204ENST00000372277 PLEKHH1Q9ULM0 1364 aa21.28■■□□□ 1
TMEM254-204ENST00000372277 USP21Q9UK80 565 aa21.27■■□□□ 1
TMEM254-204ENST00000372277 TRPC5Q9UL62 973 aaPredicted RBP21.27■■□□□ 1
TMEM254-204ENST00000372277 HRCP23327 699 aa21.26■□□□□ 0.99
TMEM254-204ENST00000372277 CFAP70Q5T0N1 1121 aa21.26■□□□□ 0.99
TMEM254-204ENST00000372277 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
TMEM254-204ENST00000372277 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
TMEM254-204ENST00000372277 RGS12O14924 1447 aa21.24■□□□□ 0.99
TMEM254-204ENST00000372277 NUTM2FA1L443 756 aa21.24■□□□□ 0.99
TMEM254-204ENST00000372277 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
TMEM254-204ENST00000372277 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
TMEM254-204ENST00000372277 DLC1Q96QB1 1528 aa21.21■□□□□ 0.99
TMEM254-204ENST00000372277 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
TMEM254-204ENST00000372277 PSME1Q06323 249 aa21.2■□□□□ 0.98
TMEM254-204ENST00000372277 PRAM1Q96QH2 718 aa21.2■□□□□ 0.98
TMEM254-204ENST00000372277 ATRNO75882 1429 aa21.2■□□□□ 0.98
TMEM254-204ENST00000372277 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
TMEM254-204ENST00000372277 POGKQ9P215 609 aa21.19■□□□□ 0.98
TMEM254-204ENST00000372277 PHF8Q9UPP1 1060 aa21.19■□□□□ 0.98
TMEM254-204ENST00000372277 ANKARQ7Z5J8 1434 aa21.17■□□□□ 0.98
TMEM254-204ENST00000372277 BCL9LQ86UU0 1499 aa21.16■□□□□ 0.98
TMEM254-204ENST00000372277 ATAD2Q6PL18 1390 aa21.16■□□□□ 0.98
TMEM254-204ENST00000372277 ADGRB1O14514 1584 aa21.15■□□□□ 0.98
TMEM254-204ENST00000372277 EIF3AQ14152 1382 aaKnown RBP21.15■□□□□ 0.98
TMEM254-204ENST00000372277 SBNO1A3KN83 1393 aa21.14■□□□□ 0.98
TMEM254-204ENST00000372277 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
TMEM254-204ENST00000372277 TNS3Q68CZ2 1445 aa21.13■□□□□ 0.97
TMEM254-204ENST00000372277 MARF1Q9Y4F3 1742 aaKnown RBP21.13■□□□□ 0.97
TMEM254-204ENST00000372277 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
TMEM254-204ENST00000372277 ADGRB2O60241 1585 aa21.13■□□□□ 0.97
TMEM254-204ENST00000372277 ARHGEF10O15013 1369 aa21.12■□□□□ 0.97
TMEM254-204ENST00000372277 GJD4Q96KN9 370 aaPredicted RBP21.11■□□□□ 0.97
TMEM254-204ENST00000372277 KDM2AQ9Y2K7 1162 aa21.11■□□□□ 0.97
TMEM254-204ENST00000372277 SLIT2O94813 1529 aa21.1■□□□□ 0.97
TMEM254-204ENST00000372277 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
TMEM254-204ENST00000372277 TRAK1Q9UPV9 953 aa21.1■□□□□ 0.97
TMEM254-204ENST00000372277 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
TMEM254-204ENST00000372277 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.08■□□□□ 0.97
TMEM254-204ENST00000372277 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
TMEM254-204ENST00000372277 RGPD8O14715 1765 aaPredicted RBP21.06■□□□□ 0.96
TMEM254-204ENST00000372277 CCDC125Q86Z20 511 aa21.06■□□□□ 0.96
TMEM254-204ENST00000372277 GPRASP1Q5JY77 1395 aa21.06■□□□□ 0.96
TMEM254-204ENST00000372277 WASLO00401 505 aaPredicted RBP21.05■□□□□ 0.96
TMEM254-204ENST00000372277 MINK1Q8N4C8 1332 aaPredicted RBP21.04■□□□□ 0.96
TMEM254-204ENST00000372277 TULP4Q9NRJ4 1543 aa21.04■□□□□ 0.96
TMEM254-204ENST00000372277 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
TMEM254-204ENST00000372277 PMFBP1Q8TBY8 1022 aa21.04■□□□□ 0.96
TMEM254-204ENST00000372277 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
TMEM254-204ENST00000372277 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
TMEM254-204ENST00000372277 VPS72Q15906 364 aa21.02■□□□□ 0.96
TMEM254-204ENST00000372277 CABLES1Q8TDN4 633 aa21.02■□□□□ 0.96
TMEM254-204ENST00000372277 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
TMEM254-204ENST00000372277 NWD2Q9ULI1 1742 aa20.98■□□□□ 0.95
TMEM254-204ENST00000372277 GLI3P10071 1580 aa20.98■□□□□ 0.95
TMEM254-204ENST00000372277 EP400Q96L91 3159 aa20.98■□□□□ 0.95
TMEM254-204ENST00000372277 NGDNQ8NEJ9 315 aaKnown RBP20.98■□□□□ 0.95
TMEM254-204ENST00000372277 ONECUT3O60422 494 aaPredicted RBP20.97■□□□□ 0.95
TMEM254-204ENST00000372277 TRPM3Q9HCF6 1732 aaPredicted RBP20.96■□□□□ 0.95
TMEM254-204ENST00000372277 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
TMEM254-204ENST00000372277 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
TMEM254-204ENST00000372277 PLEKHG5O94827 1062 aa20.94■□□□□ 0.94
TMEM254-204ENST00000372277 SEPT12Q8IYM1 358 aa20.94■□□□□ 0.94
TMEM254-204ENST00000372277 NUDT16Q96DE0 195 aaKnown RBP20.94■□□□□ 0.94
TMEM254-204ENST00000372277 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
TMEM254-204ENST00000372277 ARHGEF28Q8N1W1 1705 aaKnown RBP20.94■□□□□ 0.94
TMEM254-204ENST00000372277 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
TMEM254-204ENST00000372277 ALS2Q96Q42 1657 aa20.93■□□□□ 0.94
TMEM254-204ENST00000372277 KIAA1210Q9ULL0 1709 aa20.93■□□□□ 0.94
TMEM254-204ENST00000372277 ATP7BP35670 1465 aa20.93■□□□□ 0.94
TMEM254-204ENST00000372277 ZRANB1Q9UGI0 708 aa20.92■□□□□ 0.94
TMEM254-204ENST00000372277 BLMP54132 1417 aaPredicted RBP20.92■□□□□ 0.94
TMEM254-204ENST00000372277 PAK3O75914 559 aaPredicted RBP20.91■□□□□ 0.94
TMEM254-204ENST00000372277 ITSN1Q15811 1721 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms