RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 SLC24A3Q9HC58 644 aa3.28□□□□□ -1.88
UBE2A-203ENST00000371569 EMILIN3Q9NT22 766 aa3.28□□□□□ -1.88
UBE2A-203ENST00000371569 THOC2Q8NI27 1593 aaKnown RBP3.28□□□□□ -1.88
UBE2A-203ENST00000371569 CD2BP2O95400 341 aaKnown RBP3.28□□□□□ -1.88
UBE2A-203ENST00000371569 BARGINQ6ZT62 677 aa3.28□□□□□ -1.88
UBE2A-203ENST00000371569 TTC13Q8NBP0 860 aa3.28□□□□□ -1.88
UBE2A-203ENST00000371569 SUPT5HO00267 1087 aaKnown RBP3.27□□□□□ -1.89
UBE2A-203ENST00000371569 LIAT1Q6ZQX7 453 aa3.27□□□□□ -1.89
UBE2A-203ENST00000371569 CYP4X1Q8N118 509 aa3.27□□□□□ -1.89
UBE2A-203ENST00000371569 NKX2-3Q8TAU0 364 aa3.27□□□□□ -1.89
UBE2A-203ENST00000371569 TOR4AQ9NXH8 423 aa3.27□□□□□ -1.89
UBE2A-203ENST00000371569 ACTN4O43707 911 aaKnown RBP3.27□□□□□ -1.89
UBE2A-203ENST00000371569 TRIM47Q96LD4 638 aa3.27□□□□□ -1.89
UBE2A-203ENST00000371569 ZMYND15Q9H091 742 aa3.27□□□□□ -1.89
UBE2A-203ENST00000371569 RANGAP1P46060 587 aaPredicted RBP3.26□□□□□ -1.89
UBE2A-203ENST00000371569 IRF7Q92985 503 aa3.26□□□□□ -1.89
UBE2A-203ENST00000371569 AK7Q96M32 723 aa3.26□□□□□ -1.89
UBE2A-203ENST00000371569 MAP3K7O43318 606 aa3.26□□□□□ -1.89
UBE2A-203ENST00000371569 EMID1Q96A84 441 aaPredicted RBP3.26□□□□□ -1.89
UBE2A-203ENST00000371569 RSPH6AQ9H0K4 717 aa3.26□□□□□ -1.89
UBE2A-203ENST00000371569 PKD2L1Q9P0L9 805 aa3.26□□□□□ -1.89
UBE2A-203ENST00000371569 RNF225M0QZC1 329 aaPredicted RBP3.25□□□□□ -1.89
UBE2A-203ENST00000371569 RSPH4AQ5TD94 716 aa3.25□□□□□ -1.89
UBE2A-203ENST00000371569 SLC6A16Q9GZN6 736 aa3.25□□□□□ -1.89
UBE2A-203ENST00000371569 GMPR2Q9P2T1 348 aaKnown RBP3.25□□□□□ -1.89
UBE2A-203ENST00000371569 BICRAQ9NZM4 1560 aa3.25□□□□□ -1.89
UBE2A-203ENST00000371569 SEMA3EO15041 775 aa3.25□□□□□ -1.89
UBE2A-203ENST00000371569 PODXL2Q9NZ53 605 aa3.25□□□□□ -1.89
UBE2A-203ENST00000371569 UNC13AQ9UPW8 1703 aa3.25□□□□□ -1.89
UBE2A-203ENST00000371569 RBM33Q96EV2 1170 aaKnown RBP3.24□□□□□ -1.89
UBE2A-203ENST00000371569 ST8SIA5O15466 376 aa3.24□□□□□ -1.89
UBE2A-203ENST00000371569 COPS2P61201 443 aa3.24□□□□□ -1.89
UBE2A-203ENST00000371569 PDIA6Q15084 440 aa3.24□□□□□ -1.89
UBE2A-203ENST00000371569 SNIP1Q8TAD8 396 aaKnown RBP3.24□□□□□ -1.89
UBE2A-203ENST00000371569 FOXK2Q01167 660 aa3.23□□□□□ -1.89
UBE2A-203ENST00000371569 SWT1Q5T5J6 900 aaKnown RBP3.23□□□□□ -1.89
UBE2A-203ENST00000371569 ATP13A2Q9NQ11 1180 aa3.23□□□□□ -1.89
UBE2A-203ENST00000371569 NUDT18Q6ZVK8 323 aa3.23□□□□□ -1.89
UBE2A-203ENST00000371569 TMEM151AQ8N4L1 468 aa3.23□□□□□ -1.89
UBE2A-203ENST00000371569 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
UBE2A-203ENST00000371569 NXF1Q9UBU9 619 aaKnown RBP3.23□□□□□ -1.89
UBE2A-203ENST00000371569 EIF4G1Q04637 1599 aaKnown RBP3.22□□□□□ -1.89
UBE2A-203ENST00000371569 BLOC1S3Q6QNY0 202 aa3.22□□□□□ -1.89
UBE2A-203ENST00000371569 REPIN1Q9BWE0 567 aaKnown RBP3.22□□□□□ -1.89
UBE2A-203ENST00000371569 ARAP1Q96P48 1450 aa3.22□□□□□ -1.89
UBE2A-203ENST00000371569 WNT7AO00755 349 aa3.22□□□□□ -1.89
UBE2A-203ENST00000371569 FAM198AQ9UFP1 575 aa3.22□□□□□ -1.89
UBE2A-203ENST00000371569 S1PR4O95977 384 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 DNAJB2P25686 324 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 H3BM21 787 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 TNFRSF10AO00220 468 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 RNF40O75150 1001 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 UBTFP17480 764 aaKnown RBP3.21□□□□□ -1.9
UBE2A-203ENST00000371569 KRI1Q8N9T8 703 aaKnown RBP3.21□□□□□ -1.9
UBE2A-203ENST00000371569 EYA1Q99502 592 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 KDM4CQ9H3R0 1056 aa3.21□□□□□ -1.9
UBE2A-203ENST00000371569 TTC24A2A3L6 582 aaPredicted RBP3.2□□□□□ -1.9
UBE2A-203ENST00000371569 LORP23490 312 aaPredicted RBP3.2□□□□□ -1.9
UBE2A-203ENST00000371569 FLIIQ13045 1269 aa3.2□□□□□ -1.9
UBE2A-203ENST00000371569 GPIHBP1Q8IV16 184 aa3.2□□□□□ -1.9
UBE2A-203ENST00000371569 SALL2Q9Y467 1007 aaPredicted RBP3.2□□□□□ -1.9
UBE2A-203ENST00000371569 DPYSL4O14531 572 aa3.2□□□□□ -1.9
UBE2A-203ENST00000371569 TRIM66O15016 1216 aa3.2□□□□□ -1.9
UBE2A-203ENST00000371569 RBM46Q8TBY0 533 aaKnown RBP3.2□□□□□ -1.9
UBE2A-203ENST00000371569 VSIG8P0DPA2 414 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 GMPRP36959 345 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 PDE4DQ08499 809 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 FOXC1Q12948 553 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 PITPNM2Q9BZ72 1349 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.19□□□□□ -1.9
UBE2A-203ENST00000371569 SMAPO00193 183 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 ZBTB24O43167 697 aaPredicted RBP3.19□□□□□ -1.9
UBE2A-203ENST00000371569 TSR1Q2NL82 804 aaKnown RBP3.19□□□□□ -1.9
UBE2A-203ENST00000371569 IL27Q8NEV9 243 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 DDX12PQ92771 950 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 GOPCQ9HD26 462 aa3.19□□□□□ -1.9
UBE2A-203ENST00000371569 TRIM26Q12899 539 aaPredicted RBP3.18□□□□□ -1.9
UBE2A-203ENST00000371569 LAMC2Q13753 1193 aa3.18□□□□□ -1.9
UBE2A-203ENST00000371569 DDRGK1Q96HY6 314 aa3.18□□□□□ -1.9
UBE2A-203ENST00000371569 GPBP1L1Q9HC44 474 aaPredicted RBP3.18□□□□□ -1.9
UBE2A-203ENST00000371569 CCDC180Q9P1Z9 1646 aa3.17□□□□□ -1.9
UBE2A-203ENST00000371569 MINK1Q8N4C8 1332 aaPredicted RBP3.17□□□□□ -1.9
UBE2A-203ENST00000371569 SMPD1P17405 629 aa3.17□□□□□ -1.9
UBE2A-203ENST00000371569 DACH1Q9UI36 760 aa3.17□□□□□ -1.9
UBE2A-203ENST00000371569 A6NJR5 290 aa3.17□□□□□ -1.9
UBE2A-203ENST00000371569 SNRPBP14678 240 aaKnown RBP3.17□□□□□ -1.9
UBE2A-203ENST00000371569 KANK3Q6NY19 840 aa3.17□□□□□ -1.9
UBE2A-203ENST00000371569 SPSB2Q99619 263 aa3.17□□□□□ -1.9
UBE2A-203ENST00000371569 HRCP23327 699 aa3.16□□□□□ -1.9
UBE2A-203ENST00000371569 MSS51Q4VC12 460 aa3.16□□□□□ -1.9
UBE2A-203ENST00000371569 RBM26Q5T8P6 1007 aaKnown RBP3.16□□□□□ -1.9
UBE2A-203ENST00000371569 NPM2Q86SE8 214 aaKnown RBP3.16□□□□□ -1.9
UBE2A-203ENST00000371569 KCTD17Q8N5Z5 321 aa3.16□□□□□ -1.9
UBE2A-203ENST00000371569 TMEM134Q9H6X4 195 aa3.16□□□□□ -1.9
UBE2A-203ENST00000371569 DNMT3AQ9Y6K1 912 aaPredicted RBP3.16□□□□□ -1.9
UBE2A-203ENST00000371569 ADGRL1O94910 1474 aa3.16□□□□□ -1.9
UBE2A-203ENST00000371569 PPEF1O14829 653 aaPredicted RBP3.16□□□□□ -1.9
UBE2A-203ENST00000371569 FMNL1O95466 1100 aaPredicted RBP3.16□□□□□ -1.9
UBE2A-203ENST00000371569 LCE2CQ5TA81 110 aa3.16□□□□□ -1.9
UBE2A-203ENST00000371569 GDF11O95390 407 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms