RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 PANK3Q9H999 370 aa19.79■□□□□ 0.76
UBE2A-202ENST00000371558 HSPA2P54652 639 aa19.78■□□□□ 0.76
UBE2A-202ENST00000371558 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
UBE2A-202ENST00000371558 FAM135BQ49AJ0 1406 aa19.77■□□□□ 0.76
UBE2A-202ENST00000371558 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
UBE2A-202ENST00000371558 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
UBE2A-202ENST00000371558 CHD2O14647 1828 aaKnown RBP19.75■□□□□ 0.75
UBE2A-202ENST00000371558 XRN1Q8IZH2 1706 aaKnown RBP19.75■□□□□ 0.75
UBE2A-202ENST00000371558 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
UBE2A-202ENST00000371558 LMTK3Q96Q04 1460 aa19.74■□□□□ 0.75
UBE2A-202ENST00000371558 CDK19Q9BWU1 502 aa19.73■□□□□ 0.75
UBE2A-202ENST00000371558 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.73■□□□□ 0.75
UBE2A-202ENST00000371558 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
UBE2A-202ENST00000371558 PRKRIP1Q9H875 184 aaPredicted RBP19.73■□□□□ 0.75
UBE2A-202ENST00000371558 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
UBE2A-202ENST00000371558 KCNA6P17658 529 aa19.71■□□□□ 0.75
UBE2A-202ENST00000371558 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
UBE2A-202ENST00000371558 PTCH1Q13635 1447 aa19.71■□□□□ 0.75
UBE2A-202ENST00000371558 PUS7Q96PZ0 661 aaKnown RBP19.69■□□□□ 0.74
UBE2A-202ENST00000371558 WASLO00401 505 aaPredicted RBP19.68■□□□□ 0.74
UBE2A-202ENST00000371558 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
UBE2A-202ENST00000371558 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
UBE2A-202ENST00000371558 ADGRB2O60241 1585 aa19.66■□□□□ 0.74
UBE2A-202ENST00000371558 CC2D1BQ5T0F9 858 aaKnown RBP19.66■□□□□ 0.74
UBE2A-202ENST00000371558 CCER2I3L3R5 266 aa19.65■□□□□ 0.74
UBE2A-202ENST00000371558 STRCQ7RTU9 1775 aa19.65■□□□□ 0.74
UBE2A-202ENST00000371558 KTN1Q86UP2 1357 aaKnown RBP19.64■□□□□ 0.73
UBE2A-202ENST00000371558 YTHDC1Q96MU7 727 aaKnown RBP19.64■□□□□ 0.73
UBE2A-202ENST00000371558 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
UBE2A-202ENST00000371558 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
UBE2A-202ENST00000371558 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
UBE2A-202ENST00000371558 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
UBE2A-202ENST00000371558 CABP1Q9NZU7 370 aa19.61■□□□□ 0.73
UBE2A-202ENST00000371558 ANKRD36BQ8N2N9 1353 aa19.61■□□□□ 0.73
UBE2A-202ENST00000371558 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
UBE2A-202ENST00000371558 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
UBE2A-202ENST00000371558 NALCNQ8IZF0 1738 aa19.61■□□□□ 0.73
UBE2A-202ENST00000371558 NUDT16Q96DE0 195 aaKnown RBP19.6■□□□□ 0.73
UBE2A-202ENST00000371558 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
UBE2A-202ENST00000371558 AMER1Q5JTC6 1135 aaPredicted RBP19.6■□□□□ 0.73
UBE2A-202ENST00000371558 A0A1W2PP64 1363 aa19.6■□□□□ 0.73
UBE2A-202ENST00000371558 ATP7BP35670 1465 aa19.59■□□□□ 0.73
UBE2A-202ENST00000371558 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
UBE2A-202ENST00000371558 PARD3Q8TEW0 1356 aa19.58■□□□□ 0.73
UBE2A-202ENST00000371558 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.73
UBE2A-202ENST00000371558 RALBP1Q15311 655 aa19.58■□□□□ 0.73
UBE2A-202ENST00000371558 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.72
UBE2A-202ENST00000371558 STRCP1A6NGW2 1772 aa19.58■□□□□ 0.72
UBE2A-202ENST00000371558 RGPD8O14715 1765 aaPredicted RBP19.58■□□□□ 0.72
UBE2A-202ENST00000371558 TERF2IPQ9NYB0 399 aa19.56■□□□□ 0.72
UBE2A-202ENST00000371558 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
UBE2A-202ENST00000371558 CCDC61Q9Y6R9 512 aa19.56■□□□□ 0.72
UBE2A-202ENST00000371558 USP32Q8NFA0 1604 aa19.55■□□□□ 0.72
UBE2A-202ENST00000371558 MYBBP1AQ9BQG0 1328 aaKnown RBP19.55■□□□□ 0.72
UBE2A-202ENST00000371558 TOPAZ1Q8N9V7 1692 aa19.55■□□□□ 0.72
UBE2A-202ENST00000371558 HDGFL2Q7Z4V5 671 aaPredicted RBP19.55■□□□□ 0.72
UBE2A-202ENST00000371558 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
UBE2A-202ENST00000371558 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
UBE2A-202ENST00000371558 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
UBE2A-202ENST00000371558 PROSER2Q86WR7 435 aaPredicted RBP19.54■□□□□ 0.72
UBE2A-202ENST00000371558 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
UBE2A-202ENST00000371558 NKTRP30414 1462 aaKnown RBP19.52■□□□□ 0.72
UBE2A-202ENST00000371558 CDC42BPGQ6DT37 1551 aa19.52■□□□□ 0.72
UBE2A-202ENST00000371558 ADGRL3Q9HAR2 1447 aa19.52■□□□□ 0.72
UBE2A-202ENST00000371558 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
UBE2A-202ENST00000371558 AKAP12Q02952 1782 aa19.51■□□□□ 0.71
UBE2A-202ENST00000371558 MON2Q7Z3U7 1717 aa19.49■□□□□ 0.71
UBE2A-202ENST00000371558 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
UBE2A-202ENST00000371558 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
UBE2A-202ENST00000371558 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
UBE2A-202ENST00000371558 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
UBE2A-202ENST00000371558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
UBE2A-202ENST00000371558 ANKARQ7Z5J8 1434 aa19.46■□□□□ 0.71
UBE2A-202ENST00000371558 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
UBE2A-202ENST00000371558 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
UBE2A-202ENST00000371558 ACEP12821 1306 aa19.46■□□□□ 0.71
UBE2A-202ENST00000371558 BRD4O60885 1362 aaPredicted RBP19.46■□□□□ 0.71
UBE2A-202ENST00000371558 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
UBE2A-202ENST00000371558 PPP2R1AP30153 589 aa19.45■□□□□ 0.7
UBE2A-202ENST00000371558 PLEKHG3A1L390 1219 aa19.45■□□□□ 0.7
UBE2A-202ENST00000371558 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
UBE2A-202ENST00000371558 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
UBE2A-202ENST00000371558 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
UBE2A-202ENST00000371558 ANKRD26Q9UPS8 1709 aa19.45■□□□□ 0.7
UBE2A-202ENST00000371558 NSD2O96028 1365 aa19.44■□□□□ 0.7
UBE2A-202ENST00000371558 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
UBE2A-202ENST00000371558 FYB1O15117 783 aa19.43■□□□□ 0.7
UBE2A-202ENST00000371558 ZNF692Q9BU19 519 aaPredicted RBP19.43■□□□□ 0.7
UBE2A-202ENST00000371558 XIRP1Q702N8 1843 aaKnown RBP19.43■□□□□ 0.7
UBE2A-202ENST00000371558 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
UBE2A-202ENST00000371558 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
UBE2A-202ENST00000371558 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
UBE2A-202ENST00000371558 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
UBE2A-202ENST00000371558 USP6P35125 1406 aa19.39■□□□□ 0.69
UBE2A-202ENST00000371558 NME9Q86XW9 330 aa19.39■□□□□ 0.69
UBE2A-202ENST00000371558 ESCO1Q5FWF5 840 aa19.38■□□□□ 0.69
UBE2A-202ENST00000371558 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
UBE2A-202ENST00000371558 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
UBE2A-202ENST00000371558 PHF8Q9UPP1 1060 aa19.37■□□□□ 0.69
UBE2A-202ENST00000371558 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms