RNA–Protein interactions for RNA: ENST00000371120.7

ATG4C-203, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-203ENST00000371120 METP08581 1390 aa16.65■□□□□ 0.26
ATG4C-203ENST00000371120 TMF1P82094 1093 aa16.65■□□□□ 0.26
ATG4C-203ENST00000371120 STRCP1A6NGW2 1772 aa16.65■□□□□ 0.26
ATG4C-203ENST00000371120 ANKLE2Q86XL3 938 aa16.64■□□□□ 0.25
ATG4C-203ENST00000371120 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
ATG4C-203ENST00000371120 LTKP29376 864 aa16.63■□□□□ 0.25
ATG4C-203ENST00000371120 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
ATG4C-203ENST00000371120 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
ATG4C-203ENST00000371120 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
ATG4C-203ENST00000371120 BRD4O60885 1362 aaPredicted RBP16.62■□□□□ 0.25
ATG4C-203ENST00000371120 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
ATG4C-203ENST00000371120 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
ATG4C-203ENST00000371120 NSD2O96028 1365 aa16.58■□□□□ 0.25
ATG4C-203ENST00000371120 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
ATG4C-203ENST00000371120 INSRP06213 1382 aa16.58■□□□□ 0.24
ATG4C-203ENST00000371120 EVC2Q86UK5 1308 aa16.57■□□□□ 0.24
ATG4C-203ENST00000371120 MST1RQ04912 1400 aa16.57■□□□□ 0.24
ATG4C-203ENST00000371120 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
ATG4C-203ENST00000371120 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
ATG4C-203ENST00000371120 CD163L1Q9NR16 1453 aa16.55■□□□□ 0.24
ATG4C-203ENST00000371120 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
ATG4C-203ENST00000371120 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
ATG4C-203ENST00000371120 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.24
ATG4C-203ENST00000371120 KCNA6P17658 529 aa16.52■□□□□ 0.23
ATG4C-203ENST00000371120 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.23
ATG4C-203ENST00000371120 PHRF1Q9P1Y6 1649 aaKnown RBP16.51■□□□□ 0.23
ATG4C-203ENST00000371120 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
ATG4C-203ENST00000371120 PARD3Q8TEW0 1356 aa16.5■□□□□ 0.23
ATG4C-203ENST00000371120 TRPM3Q9HCF6 1732 aaPredicted RBP16.49■□□□□ 0.23
ATG4C-203ENST00000371120 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
ATG4C-203ENST00000371120 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
ATG4C-203ENST00000371120 PLEKHH1Q9ULM0 1364 aa16.46■□□□□ 0.23
ATG4C-203ENST00000371120 ABCC6O95255 1503 aa16.46■□□□□ 0.22
ATG4C-203ENST00000371120 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
ATG4C-203ENST00000371120 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
ATG4C-203ENST00000371120 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
ATG4C-203ENST00000371120 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
ATG4C-203ENST00000371120 PER1O15534 1290 aaPredicted RBP16.45■□□□□ 0.22
ATG4C-203ENST00000371120 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
ATG4C-203ENST00000371120 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
ATG4C-203ENST00000371120 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
ATG4C-203ENST00000371120 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
ATG4C-203ENST00000371120 RGPD8O14715 1765 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-203ENST00000371120 MED1Q15648 1581 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-203ENST00000371120 NHSL1Q5SYE7 1610 aa16.44■□□□□ 0.22
ATG4C-203ENST00000371120 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
ATG4C-203ENST00000371120 CRYBG1Q9Y4K1 1723 aa16.43■□□□□ 0.22
ATG4C-203ENST00000371120 AMOTL2Q9Y2J4 779 aa16.43■□□□□ 0.22
ATG4C-203ENST00000371120 RALBP1Q15311 655 aa16.42■□□□□ 0.22
ATG4C-203ENST00000371120 ALS2Q96Q42 1657 aa16.42■□□□□ 0.22
ATG4C-203ENST00000371120 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
ATG4C-203ENST00000371120 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
ATG4C-203ENST00000371120 POGKQ9P215 609 aa16.39■□□□□ 0.21
ATG4C-203ENST00000371120 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
ATG4C-203ENST00000371120 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
ATG4C-203ENST00000371120 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
ATG4C-203ENST00000371120 NCKAP5LQ9HCH0 1330 aa16.37■□□□□ 0.21
ATG4C-203ENST00000371120 SHPRHQ149N8 1683 aa16.37■□□□□ 0.21
ATG4C-203ENST00000371120 USP31Q70CQ4 1352 aa16.37■□□□□ 0.21
ATG4C-203ENST00000371120 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
ATG4C-203ENST00000371120 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
ATG4C-203ENST00000371120 SLIT3O75094 1523 aa16.36■□□□□ 0.21
ATG4C-203ENST00000371120 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
ATG4C-203ENST00000371120 USP6P35125 1406 aa16.35■□□□□ 0.21
ATG4C-203ENST00000371120 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
ATG4C-203ENST00000371120 AHDC1Q5TGY3 1603 aaPredicted RBP16.34■□□□□ 0.21
ATG4C-203ENST00000371120 ANP32CO43423 234 aa16.34■□□□□ 0.21
ATG4C-203ENST00000371120 DDX10Q13206 875 aaKnown RBP16.34■□□□□ 0.21
ATG4C-203ENST00000371120 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
ATG4C-203ENST00000371120 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
ATG4C-203ENST00000371120 TERF2IPQ9NYB0 399 aa16.34■□□□□ 0.21
ATG4C-203ENST00000371120 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
ATG4C-203ENST00000371120 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.21
ATG4C-203ENST00000371120 COL22A1Q8NFW1 1626 aaPredicted RBP16.33■□□□□ 0.21
ATG4C-203ENST00000371120 OVOS2A0A0J9YW53 1432 aa16.33■□□□□ 0.2
ATG4C-203ENST00000371120 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
ATG4C-203ENST00000371120 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.2
ATG4C-203ENST00000371120 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
ATG4C-203ENST00000371120 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
ATG4C-203ENST00000371120 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
ATG4C-203ENST00000371120 CCDC61Q9Y6R9 512 aa16.32■□□□□ 0.2
ATG4C-203ENST00000371120 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
ATG4C-203ENST00000371120 C1orf167Q5SNV9 1468 aa16.31■□□□□ 0.2
ATG4C-203ENST00000371120 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
ATG4C-203ENST00000371120 FAM208AQ9UK61 1670 aaKnown RBP16.31■□□□□ 0.2
ATG4C-203ENST00000371120 PANK3Q9H999 370 aa16.3■□□□□ 0.2
ATG4C-203ENST00000371120 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
ATG4C-203ENST00000371120 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
ATG4C-203ENST00000371120 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
ATG4C-203ENST00000371120 STK26Q9P289 416 aa16.29■□□□□ 0.2
ATG4C-203ENST00000371120 RGPD1P0DJD0 1748 aa16.29■□□□□ 0.2
ATG4C-203ENST00000371120 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
ATG4C-203ENST00000371120 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
ATG4C-203ENST00000371120 CDK12Q9NYV4 1490 aaPredicted RBP16.28■□□□□ 0.2
ATG4C-203ENST00000371120 MINK1Q8N4C8 1332 aaPredicted RBP16.28■□□□□ 0.2
ATG4C-203ENST00000371120 PLEKHG2Q9H7P9 1386 aa16.28■□□□□ 0.2
ATG4C-203ENST00000371120 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
ATG4C-203ENST00000371120 SBNO1A3KN83 1393 aa16.27■□□□□ 0.19
ATG4C-203ENST00000371120 PXDNQ92626 1479 aa16.26■□□□□ 0.19
ATG4C-203ENST00000371120 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms