RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 C8orf37Q96NL8 207 aa19.61■□□□□ 0.73
RPF1-201ENST00000370654 LRPPRCP42704 1394 aaKnown RBP19.6■□□□□ 0.73
RPF1-201ENST00000370654 ANKRD30BQ9BXX2 1392 aa19.6■□□□□ 0.73
RPF1-201ENST00000370654 TECPR2O15040 1411 aa19.6■□□□□ 0.73
RPF1-201ENST00000370654 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
RPF1-201ENST00000370654 CDC42BPGQ6DT37 1551 aa19.58■□□□□ 0.73
RPF1-201ENST00000370654 ADAMTS2O95450 1211 aa19.58■□□□□ 0.73
RPF1-201ENST00000370654 RXRBP28702 533 aa19.58■□□□□ 0.73
RPF1-201ENST00000370654 ABCC11Q96J66 1382 aa19.58■□□□□ 0.72
RPF1-201ENST00000370654 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.72
RPF1-201ENST00000370654 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
RPF1-201ENST00000370654 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
RPF1-201ENST00000370654 CFAP70Q5T0N1 1121 aa19.56■□□□□ 0.72
RPF1-201ENST00000370654 YTHDC2Q9H6S0 1430 aaKnown RBP19.56■□□□□ 0.72
RPF1-201ENST00000370654 KNDC1Q76NI1 1749 aa19.55■□□□□ 0.72
RPF1-201ENST00000370654 UPF1Q92900 1129 aaKnown RBP eCLIP19.55■□□□□ 0.72
RPF1-201ENST00000370654 C14orf93Q9H972 538 aaKnown RBP19.55■□□□□ 0.72
RPF1-201ENST00000370654 PXDNQ92626 1479 aa19.54■□□□□ 0.72
RPF1-201ENST00000370654 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
RPF1-201ENST00000370654 FOXO3O43524 673 aa19.54■□□□□ 0.72
RPF1-201ENST00000370654 QTRT2Q9H974 415 aaKnown RBP19.54■□□□□ 0.72
RPF1-201ENST00000370654 NGLY1Q96IV0 654 aa19.52■□□□□ 0.72
RPF1-201ENST00000370654 RGS12O14924 1447 aa19.51■□□□□ 0.71
RPF1-201ENST00000370654 COL22A1Q8NFW1 1626 aaPredicted RBP19.51■□□□□ 0.71
RPF1-201ENST00000370654 CDK12Q9NYV4 1490 aaPredicted RBP19.5■□□□□ 0.71
RPF1-201ENST00000370654 FMN2Q9NZ56 1722 aa19.5■□□□□ 0.71
RPF1-201ENST00000370654 NPHP3Q7Z494 1330 aa19.5■□□□□ 0.71
RPF1-201ENST00000370654 MYOM2P54296 1465 aa19.49■□□□□ 0.71
RPF1-201ENST00000370654 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
RPF1-201ENST00000370654 SAFB2Q14151 953 aaKnown RBP eCLIP19.47■□□□□ 0.71
RPF1-201ENST00000370654 FNBP4Q8N3X1 1017 aaPredicted RBP19.46■□□□□ 0.71
RPF1-201ENST00000370654 SIRT1Q96EB6 747 aa19.46■□□□□ 0.71
RPF1-201ENST00000370654 USP21Q9UK80 565 aa19.46■□□□□ 0.71
RPF1-201ENST00000370654 RGPD8O14715 1765 aaPredicted RBP19.46■□□□□ 0.71
RPF1-201ENST00000370654 PRAM1Q96QH2 718 aa19.45■□□□□ 0.7
RPF1-201ENST00000370654 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
RPF1-201ENST00000370654 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
RPF1-201ENST00000370654 ADGRB1O14514 1584 aa19.43■□□□□ 0.7
RPF1-201ENST00000370654 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
RPF1-201ENST00000370654 ATRNO75882 1429 aa19.42■□□□□ 0.7
RPF1-201ENST00000370654 BCL9LQ86UU0 1499 aa19.42■□□□□ 0.7
RPF1-201ENST00000370654 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
RPF1-201ENST00000370654 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
RPF1-201ENST00000370654 TRPC5Q9UL62 973 aaPredicted RBP19.4■□□□□ 0.7
RPF1-201ENST00000370654 PHF8Q9UPP1 1060 aa19.4■□□□□ 0.7
RPF1-201ENST00000370654 KIF1AQ12756 1690 aa19.39■□□□□ 0.69
RPF1-201ENST00000370654 USP32Q8NFA0 1604 aa19.39■□□□□ 0.69
RPF1-201ENST00000370654 DCAF11Q8TEB1 546 aa19.39■□□□□ 0.69
RPF1-201ENST00000370654 TRAK1Q9UPV9 953 aa19.39■□□□□ 0.69
RPF1-201ENST00000370654 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.69
RPF1-201ENST00000370654 DLC1Q96QB1 1528 aa19.38■□□□□ 0.69
RPF1-201ENST00000370654 HIRIP3Q9BW71 556 aaPredicted RBP19.38■□□□□ 0.69
RPF1-201ENST00000370654 PLEKHG5O94827 1062 aa19.37■□□□□ 0.69
RPF1-201ENST00000370654 CABLES1Q8TDN4 633 aa19.37■□□□□ 0.69
RPF1-201ENST00000370654 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
RPF1-201ENST00000370654 POGKQ9P215 609 aa19.36■□□□□ 0.69
RPF1-201ENST00000370654 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
RPF1-201ENST00000370654 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
RPF1-201ENST00000370654 HRCP23327 699 aa19.33■□□□□ 0.69
RPF1-201ENST00000370654 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.69
RPF1-201ENST00000370654 ADGRB2O60241 1585 aa19.33■□□□□ 0.68
RPF1-201ENST00000370654 SLIT2O94813 1529 aa19.33■□□□□ 0.68
RPF1-201ENST00000370654 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
RPF1-201ENST00000370654 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
RPF1-201ENST00000370654 GLI3P10071 1580 aa19.3■□□□□ 0.68
RPF1-201ENST00000370654 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
RPF1-201ENST00000370654 PSME1Q06323 249 aa19.3■□□□□ 0.68
RPF1-201ENST00000370654 LMOD2Q6P5Q4 547 aa19.3■□□□□ 0.68
RPF1-201ENST00000370654 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
RPF1-201ENST00000370654 RALGAPBQ86X10 1494 aa19.29■□□□□ 0.68
RPF1-201ENST00000370654 ABCA3Q99758 1704 aa19.28■□□□□ 0.68
RPF1-201ENST00000370654 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.28■□□□□ 0.68
RPF1-201ENST00000370654 ATAD2Q6PL18 1390 aa19.28■□□□□ 0.68
RPF1-201ENST00000370654 TRPM3Q9HCF6 1732 aaPredicted RBP19.27■□□□□ 0.68
RPF1-201ENST00000370654 WASLO00401 505 aaPredicted RBP19.27■□□□□ 0.68
RPF1-201ENST00000370654 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
RPF1-201ENST00000370654 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
RPF1-201ENST00000370654 TULP4Q9NRJ4 1543 aa19.25■□□□□ 0.67
RPF1-201ENST00000370654 HAP1P54257 671 aaPredicted RBP19.24■□□□□ 0.67
RPF1-201ENST00000370654 PLCH1Q4KWH8 1693 aa19.23■□□□□ 0.67
RPF1-201ENST00000370654 ALS2Q96Q42 1657 aa19.23■□□□□ 0.67
RPF1-201ENST00000370654 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
RPF1-201ENST00000370654 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
RPF1-201ENST00000370654 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
RPF1-201ENST00000370654 EP400Q96L91 3159 aa19.21■□□□□ 0.67
RPF1-201ENST00000370654 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
RPF1-201ENST00000370654 VPS72Q15906 364 aa19.2■□□□□ 0.66
RPF1-201ENST00000370654 ATP7BP35670 1465 aa19.2■□□□□ 0.66
RPF1-201ENST00000370654 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
RPF1-201ENST00000370654 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
RPF1-201ENST00000370654 NGDNQ8NEJ9 315 aaKnown RBP19.19■□□□□ 0.66
RPF1-201ENST00000370654 GPRASP1Q5JY77 1395 aa19.18■□□□□ 0.66
RPF1-201ENST00000370654 NWD2Q9ULI1 1742 aa19.18■□□□□ 0.66
RPF1-201ENST00000370654 CDK19Q9BWU1 502 aa19.18■□□□□ 0.66
RPF1-201ENST00000370654 EIF3AQ14152 1382 aaKnown RBP19.17■□□□□ 0.66
RPF1-201ENST00000370654 CRYBG1Q9Y4K1 1723 aa19.17■□□□□ 0.66
RPF1-201ENST00000370654 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
RPF1-201ENST00000370654 NRAPQ86VF7 1730 aa19.16■□□□□ 0.66
RPF1-201ENST00000370654 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
RPF1-201ENST00000370654 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms