RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ATP7AQ04656 1500 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 SMG6Q86US8 1419 aaKnown RBP9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 SULT6B1Q6IMI4 303 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 LMOD3Q0VAK6 560 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 UHRF1BP1Q6BDS2 1440 aa9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 SLC4A3P48751 1232 aa9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 DZIP1LQ8IYY4 767 aaKnown RBP9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 STK31Q9BXU1 1019 aa9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 CENPQQ7L2Z9 268 aaPredicted RBP9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 YEATS2Q9ULM3 1422 aa9.03□□□□□ -0.96
TGFBR3-202ENST00000370399 SLFN5Q08AF3 891 aa9.02□□□□□ -0.96
TGFBR3-202ENST00000370399 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 BECN1Q14457 450 aa9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 NGEFQ8N5V2 710 aa9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 OS9Q13438 667 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 CHMP4BQ9H444 224 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 ZRANB1Q9UGI0 708 aa9.02□□□□□ -0.97
TGFBR3-202ENST00000370399 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 DCTN1Q14203 1278 aa9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 PARD3Q8TEW0 1356 aa9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 FYB1O15117 783 aa9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 UHRF1BP1LA0JNW5 1464 aa9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 ARHGEF5Q12774 1597 aa9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 ANKLE2Q86XL3 938 aa9.01□□□□□ -0.97
TGFBR3-202ENST00000370399 TMPOP42166 694 aaKnown RBP9□□□□□ -0.97
TGFBR3-202ENST00000370399 NPATQ14207 1427 aa9□□□□□ -0.97
TGFBR3-202ENST00000370399 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
TGFBR3-202ENST00000370399 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
TGFBR3-202ENST00000370399 ZNF692Q9BU19 519 aaPredicted RBP9□□□□□ -0.97
TGFBR3-202ENST00000370399 CDC42BPAQ5VT25 1732 aa9□□□□□ -0.97
TGFBR3-202ENST00000370399 UGGT1Q9NYU2 1555 aa9□□□□□ -0.97
TGFBR3-202ENST00000370399 SLKQ9H2G2 1235 aaPredicted RBP9□□□□□ -0.97
TGFBR3-202ENST00000370399 ZCCHC11Q5TAX3 1644 aaKnown RBP8.99□□□□□ -0.97
TGFBR3-202ENST00000370399 POGZQ7Z3K3 1410 aa8.99□□□□□ -0.97
TGFBR3-202ENST00000370399 ANKRD45Q5TZF3 282 aa8.99□□□□□ -0.97
TGFBR3-202ENST00000370399 MYO5CQ9NQX4 1742 aa8.99□□□□□ -0.97
TGFBR3-202ENST00000370399 GNAI1P63096 354 aa8.99□□□□□ -0.97
TGFBR3-202ENST00000370399 TEFQ10587 303 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 TSPYL4Q9UJ04 414 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 ATP10AO60312 1499 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 ZMYM3Q14202 1370 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 MIS18AQ9NYP9 233 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 PPP6R1Q9UPN7 881 aa8.98□□□□□ -0.97
TGFBR3-202ENST00000370399 TNRQ92752 1358 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 FOXO3O43524 673 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 ATF3P18847 181 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 C1orf115Q9H7X2 142 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 PREX2Q70Z35 1606 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 ZNF428Q96B54 188 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 LNPKQ9C0E8 428 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 SPINK5Q9NQ38 1064 aaPredicted RBP8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 NOB1Q9ULX3 412 aaKnown RBP8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 ABCC1P33527 1531 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 GPRASP1Q5JY77 1395 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 WDR63Q8IWG1 891 aa8.97□□□□□ -0.97
TGFBR3-202ENST00000370399 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
TGFBR3-202ENST00000370399 FAM161AQ3B820 660 aa8.96□□□□□ -0.97
TGFBR3-202ENST00000370399 FCHSD2O94868 740 aa8.96□□□□□ -0.98
TGFBR3-202ENST00000370399 TWISTNBQ3B726 338 aaPredicted RBP8.96□□□□□ -0.98
TGFBR3-202ENST00000370399 NLRP2Q9NX02 1062 aa8.96□□□□□ -0.98
TGFBR3-202ENST00000370399 FKBP5Q13451 457 aaPredicted RBP8.96□□□□□ -0.98
TGFBR3-202ENST00000370399 MCM10Q7L590 875 aa8.96□□□□□ -0.98
TGFBR3-202ENST00000370399 ACEP12821 1306 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 RIMS2Q9UQ26 1411 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 PLEKHH1Q9ULM0 1364 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 FAM83GA6ND36 823 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 CASC1Q6TDU7 716 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 ZC3H6P61129 1189 aaKnown RBP8.95□□□□□ -0.98
TGFBR3-202ENST00000370399 KIF16BQ96L93 1317 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 USHBP1Q8N6Y0 703 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 SSH1Q8WYL5 1049 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 DMRT2Q9Y5R5 561 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 PDE3AQ14432 1141 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 HSP90AB2PQ58FF8 381 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 ASXL1Q8IXJ9 1541 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 ANKRD36BQ8N2N9 1353 aa8.94□□□□□ -0.98
TGFBR3-202ENST00000370399 A0A1W2PP64 1363 aa8.93□□□□□ -0.98
TGFBR3-202ENST00000370399 HSP90AB1P08238 724 aaKnown RBP8.93□□□□□ -0.98
TGFBR3-202ENST00000370399 NFE2L2Q16236 605 aa8.93□□□□□ -0.98
TGFBR3-202ENST00000370399 POLKQ9UBT6 870 aa8.93□□□□□ -0.98
TGFBR3-202ENST00000370399 ATF7IPQ6VMQ6 1270 aa8.93□□□□□ -0.98
TGFBR3-202ENST00000370399 CCDC9Q9Y3X0 531 aaKnown RBP8.93□□□□□ -0.98
TGFBR3-202ENST00000370399 API5Q9BZZ5 524 aaKnown RBP8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 TNNQ9UQP3 1299 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms