RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 TMEM131LA2VDJ0 1609 aa28.89■■■□□ 2.22
CNN3-201ENST00000370206 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.88■■■□□ 2.21
CNN3-201ENST00000370206 CGNL1Q0VF96 1302 aa28.88■■■□□ 2.21
CNN3-201ENST00000370206 MYO5BQ9ULV0 1848 aa28.87■■■□□ 2.21
CNN3-201ENST00000370206 E9PSI1 815 aa28.87■■■□□ 2.21
CNN3-201ENST00000370206 SPINK5Q9NQ38 1064 aaPredicted RBP28.87■■■□□ 2.21
CNN3-201ENST00000370206 ANKRD36BQ8N2N9 1353 aa28.87■■■□□ 2.21
CNN3-201ENST00000370206 MS4A1P11836 297 aa28.86■■■□□ 2.21
CNN3-201ENST00000370206 NSD2O96028 1365 aa28.84■■■□□ 2.21
CNN3-201ENST00000370206 ANP32AP39687 249 aaKnown RBP28.84■■■□□ 2.21
CNN3-201ENST00000370206 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
CNN3-201ENST00000370206 TNNT2P45379 298 aaPredicted RBP28.81■■■□□ 2.2
CNN3-201ENST00000370206 NOP58Q9Y2X3 529 aaKnown RBP28.81■■■□□ 2.2
CNN3-201ENST00000370206 DIP2BQ9P265 1576 aa28.8■■■□□ 2.2
CNN3-201ENST00000370206 DMRT2Q9Y5R5 561 aa28.79■■■□□ 2.2
CNN3-201ENST00000370206 NINLQ9Y2I6 1382 aa28.79■■■□□ 2.2
CNN3-201ENST00000370206 KDM2BQ8NHM5 1336 aa28.79■■■□□ 2.2
CNN3-201ENST00000370206 IQSEC2Q5JU85 1478 aa28.78■■■□□ 2.2
CNN3-201ENST00000370206 CABP2Q9NPB3 220 aa28.78■■■□□ 2.2
CNN3-201ENST00000370206 PTPRMP28827 1452 aa28.77■■■□□ 2.2
CNN3-201ENST00000370206 PDE4AP27815 886 aa28.77■■■□□ 2.2
CNN3-201ENST00000370206 WWC1Q8IX03 1113 aa28.77■■■□□ 2.2
CNN3-201ENST00000370206 IPO9Q96P70 1041 aaKnown RBP28.77■■■□□ 2.2
CNN3-201ENST00000370206 REREQ9P2R6 1566 aa28.77■■■□□ 2.2
CNN3-201ENST00000370206 RUNDC1Q96C34 613 aa28.77■■■□□ 2.2
CNN3-201ENST00000370206 MTHFSP49914 203 aa28.76■■■□□ 2.19
CNN3-201ENST00000370206 CFAP53Q96M91 514 aa28.75■■■□□ 2.19
CNN3-201ENST00000370206 FAM69CQ0P6D2 419 aa28.75■■■□□ 2.19
CNN3-201ENST00000370206 BACH2Q9BYV9 841 aa28.75■■■□□ 2.19
CNN3-201ENST00000370206 RIMBP3CA6NJZ7 1639 aa28.74■■■□□ 2.19
CNN3-201ENST00000370206 RIMBP3BA6NNM3 1639 aa28.74■■■□□ 2.19
CNN3-201ENST00000370206 RIMBP3Q9UFD9 1639 aa28.74■■■□□ 2.19
CNN3-201ENST00000370206 CENPQQ7L2Z9 268 aaPredicted RBP28.74■■■□□ 2.19
CNN3-201ENST00000370206 STK26Q9P289 416 aa28.74■■■□□ 2.19
CNN3-201ENST00000370206 SAFB2Q14151 953 aaKnown RBP eCLIP28.73■■■□□ 2.19
CNN3-201ENST00000370206 AGLP35573 1532 aa28.73■■■□□ 2.19
CNN3-201ENST00000370206 FBXO31Q5XUX0 539 aaPredicted RBP28.72■■■□□ 2.19
CNN3-201ENST00000370206 YTHDC2Q9H6S0 1430 aaKnown RBP28.72■■■□□ 2.19
CNN3-201ENST00000370206 ABCC11Q96J66 1382 aa28.72■■■□□ 2.19
CNN3-201ENST00000370206 CLTCQ00610 1675 aaKnown RBP28.71■■■□□ 2.19
CNN3-201ENST00000370206 PHF23Q9BUL5 403 aaPredicted RBP28.71■■■□□ 2.19
CNN3-201ENST00000370206 A0A1W2PP64 1363 aa28.71■■■□□ 2.19
CNN3-201ENST00000370206 BCAR3O75815 825 aa28.7■■■□□ 2.19
CNN3-201ENST00000370206 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.18
CNN3-201ENST00000370206 PPP6R1Q9UPN7 881 aa28.69■■■□□ 2.18
CNN3-201ENST00000370206 ALKQ9UM73 1620 aa28.69■■■□□ 2.18
CNN3-201ENST00000370206 PAK3O75914 559 aaPredicted RBP28.68■■■□□ 2.18
CNN3-201ENST00000370206 SRPK2P78362 688 aaKnown RBP28.68■■■□□ 2.18
CNN3-201ENST00000370206 TCP11L2Q8N4U5 519 aa28.68■■■□□ 2.18
CNN3-201ENST00000370206 PRAM1Q96QH2 718 aa28.66■■■□□ 2.18
CNN3-201ENST00000370206 TSPOAP1O95153 1857 aa28.65■■■□□ 2.18
CNN3-201ENST00000370206 NCBP3Q53F19 620 aaKnown RBP28.65■■■□□ 2.18
CNN3-201ENST00000370206 CCDC27Q2M243 656 aa28.64■■■□□ 2.18
CNN3-201ENST00000370206 SKAP1Q86WV1 359 aa28.64■■■□□ 2.18
CNN3-201ENST00000370206 WDR63Q8IWG1 891 aa28.64■■■□□ 2.18
CNN3-201ENST00000370206 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.18
CNN3-201ENST00000370206 RRP7AQ9Y3A4 280 aaKnown RBP28.64■■■□□ 2.17
CNN3-201ENST00000370206 MINK1Q8N4C8 1332 aaPredicted RBP28.63■■■□□ 2.17
CNN3-201ENST00000370206 POGKQ9P215 609 aa28.63■■■□□ 2.17
CNN3-201ENST00000370206 CD163L1Q9NR16 1453 aa28.62■■■□□ 2.17
CNN3-201ENST00000370206 PDE3AQ14432 1141 aa28.62■■■□□ 2.17
CNN3-201ENST00000370206 NEUROD2Q15784 382 aa28.62■■■□□ 2.17
CNN3-201ENST00000370206 MED14O60244 1454 aa28.61■■■□□ 2.17
CNN3-201ENST00000370206 ANKRD26Q9UPS8 1709 aa28.61■■■□□ 2.17
CNN3-201ENST00000370206 ZBTB47Q9UFB7 747 aaPredicted RBP28.61■■■□□ 2.17
CNN3-201ENST00000370206 ADGRB2O60241 1585 aa28.61■■■□□ 2.17
CNN3-201ENST00000370206 SPATA31D1Q6ZQQ2 1576 aa28.61■■■□□ 2.17
CNN3-201ENST00000370206 TERF2IPQ9NYB0 399 aa28.61■■■□□ 2.17
CNN3-201ENST00000370206 STAG3Q9UJ98 1225 aa28.6■■■□□ 2.17
CNN3-201ENST00000370206 ARHGEF40Q8TER5 1519 aa28.59■■■□□ 2.17
CNN3-201ENST00000370206 A2ML1A8K2U0 1454 aa28.58■■■□□ 2.17
CNN3-201ENST00000370206 NLRP1Q9C000 1473 aa28.58■■■□□ 2.17
CNN3-201ENST00000370206 U2AF1L5P0DN76 240 aaPredicted RBP28.57■■■□□ 2.16
CNN3-201ENST00000370206 U2AF1Q01081 240 aaKnown RBP eCLIP28.57■■■□□ 2.16
CNN3-201ENST00000370206 NPM2Q86SE8 214 aaKnown RBP28.57■■■□□ 2.16
CNN3-201ENST00000370206 COL3A1P02461 1466 aaPredicted RBP28.56■■■□□ 2.16
CNN3-201ENST00000370206 DLC1Q96QB1 1528 aa28.56■■■□□ 2.16
CNN3-201ENST00000370206 GGNBP2Q9H3C7 697 aa28.56■■■□□ 2.16
CNN3-201ENST00000370206 FYB1O15117 783 aa28.54■■■□□ 2.16
CNN3-201ENST00000370206 RARSP54136 660 aaKnown RBP28.53■■■□□ 2.16
CNN3-201ENST00000370206 CDK19Q9BWU1 502 aa28.53■■■□□ 2.16
CNN3-201ENST00000370206 RIMS2Q9UQ26 1411 aa28.52■■■□□ 2.16
CNN3-201ENST00000370206 SETD1AO15047 1707 aaKnown RBP28.52■■■□□ 2.16
CNN3-201ENST00000370206 CANXP27824 592 aaKnown RBP28.51■■■□□ 2.16
CNN3-201ENST00000370206 HDGFL2Q7Z4V5 671 aaPredicted RBP28.51■■■□□ 2.16
CNN3-201ENST00000370206 MYH16Q9H6N6 1097 aa28.5■■■□□ 2.15
CNN3-201ENST00000370206 KIF20BQ96Q89 1820 aa28.48■■■□□ 2.15
CNN3-201ENST00000370206 PANK1Q8TE04 598 aa28.48■■■□□ 2.15
CNN3-201ENST00000370206 PLEKHF1Q96S99 279 aa28.47■■■□□ 2.15
CNN3-201ENST00000370206 CLUAP1Q96AJ1 413 aa28.47■■■□□ 2.15
CNN3-201ENST00000370206 CABP1Q9NZU7 370 aa28.45■■■□□ 2.15
CNN3-201ENST00000370206 COG6Q9Y2V7 657 aa28.45■■■□□ 2.15
CNN3-201ENST00000370206 FAM161AQ3B820 660 aa28.44■■■□□ 2.14
CNN3-201ENST00000370206 FRAT1Q92837 279 aaPredicted RBP28.44■■■□□ 2.14
CNN3-201ENST00000370206 ATP7BP35670 1465 aa28.44■■■□□ 2.14
CNN3-201ENST00000370206 U2SURPO15042 1029 aaKnown RBP28.44■■■□□ 2.14
CNN3-201ENST00000370206 PNPLA6Q8IY17 1366 aa28.43■■■□□ 2.14
CNN3-201ENST00000370206 IGHDP01880 384 aa28.43■■■□□ 2.14
CNN3-201ENST00000370206 AAMPQ13685 434 aa28.43■■■□□ 2.14
CNN3-201ENST00000370206 MLECQ14165 292 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms