RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DISP3Q9P2K9 1392 aa23.87■■□□□ 1.41
UBE3D-203ENST00000369747 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
UBE3D-203ENST00000369747 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
UBE3D-203ENST00000369747 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
UBE3D-203ENST00000369747 TMF1P82094 1093 aa23.82■■□□□ 1.4
UBE3D-203ENST00000369747 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
UBE3D-203ENST00000369747 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
UBE3D-203ENST00000369747 MINK1Q8N4C8 1332 aaPredicted RBP23.82■■□□□ 1.4
UBE3D-203ENST00000369747 PTCH1Q13635 1447 aa23.81■■□□□ 1.4
UBE3D-203ENST00000369747 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
UBE3D-203ENST00000369747 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
UBE3D-203ENST00000369747 TULP4Q9NRJ4 1543 aa23.77■■□□□ 1.4
UBE3D-203ENST00000369747 NWD1Q149M9 1564 aa23.76■■□□□ 1.39
UBE3D-203ENST00000369747 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
UBE3D-203ENST00000369747 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
UBE3D-203ENST00000369747 SLC24A1O60721 1099 aa23.75■■□□□ 1.39
UBE3D-203ENST00000369747 PRKRIP1Q9H875 184 aaPredicted RBP23.74■■□□□ 1.39
UBE3D-203ENST00000369747 DMRT2Q9Y5R5 561 aa23.73■■□□□ 1.39
UBE3D-203ENST00000369747 EVC2Q86UK5 1308 aa23.73■■□□□ 1.39
UBE3D-203ENST00000369747 CABP2Q9NPB3 220 aa23.71■■□□□ 1.39
UBE3D-203ENST00000369747 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
UBE3D-203ENST00000369747 CDCA8Q53HL2 280 aa23.71■■□□□ 1.39
UBE3D-203ENST00000369747 CDK19Q9BWU1 502 aa23.7■■□□□ 1.38
UBE3D-203ENST00000369747 SRPK2P78362 688 aaKnown RBP23.69■■□□□ 1.38
UBE3D-203ENST00000369747 NKTRP30414 1462 aaKnown RBP23.69■■□□□ 1.38
UBE3D-203ENST00000369747 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
UBE3D-203ENST00000369747 WASLO00401 505 aaPredicted RBP23.68■■□□□ 1.38
UBE3D-203ENST00000369747 ADGRB2O60241 1585 aa23.66■■□□□ 1.38
UBE3D-203ENST00000369747 NALCNQ8IZF0 1738 aa23.66■■□□□ 1.38
UBE3D-203ENST00000369747 CCDC184Q52MB2 194 aa23.64■■□□□ 1.37
UBE3D-203ENST00000369747 MYOM1P52179 1685 aa23.64■■□□□ 1.37
UBE3D-203ENST00000369747 TMEM94Q12767 1356 aa23.63■■□□□ 1.37
UBE3D-203ENST00000369747 NUTM2FA1L443 756 aa23.62■■□□□ 1.37
UBE3D-203ENST00000369747 C14orf37Q86TY3 774 aa23.62■■□□□ 1.37
UBE3D-203ENST00000369747 PUS7Q96PZ0 661 aaKnown RBP23.61■■□□□ 1.37
UBE3D-203ENST00000369747 ADGRL3Q9HAR2 1447 aa23.61■■□□□ 1.37
UBE3D-203ENST00000369747 SLC12A5Q9H2X9 1139 aa23.61■■□□□ 1.37
UBE3D-203ENST00000369747 TMC1Q8TDI8 760 aa23.6■■□□□ 1.37
UBE3D-203ENST00000369747 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
UBE3D-203ENST00000369747 ATAD2Q6PL18 1390 aa23.58■■□□□ 1.36
UBE3D-203ENST00000369747 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
UBE3D-203ENST00000369747 NUDT16Q96DE0 195 aaKnown RBP23.57■■□□□ 1.36
UBE3D-203ENST00000369747 PANK3Q9H999 370 aa23.57■■□□□ 1.36
UBE3D-203ENST00000369747 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
UBE3D-203ENST00000369747 ATP7BP35670 1465 aa23.56■■□□□ 1.36
UBE3D-203ENST00000369747 CDC42BPGQ6DT37 1551 aa23.55■■□□□ 1.36
UBE3D-203ENST00000369747 CABP1Q9NZU7 370 aa23.55■■□□□ 1.36
UBE3D-203ENST00000369747 USP32Q8NFA0 1604 aa23.54■■□□□ 1.36
UBE3D-203ENST00000369747 C19orf44Q9H6X5 657 aa23.54■■□□□ 1.36
UBE3D-203ENST00000369747 MRS2Q9HD23 443 aa23.54■■□□□ 1.36
UBE3D-203ENST00000369747 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
UBE3D-203ENST00000369747 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
UBE3D-203ENST00000369747 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
UBE3D-203ENST00000369747 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
UBE3D-203ENST00000369747 PPIP5K1Q6PFW1 1433 aa23.52■■□□□ 1.35
UBE3D-203ENST00000369747 HNRNPUQ00839 825 aaKnown RBP eCLIP23.51■■□□□ 1.35
UBE3D-203ENST00000369747 PER1O15534 1290 aaPredicted RBP23.51■■□□□ 1.35
UBE3D-203ENST00000369747 LTBP4Q8N2S1 1624 aa23.49■■□□□ 1.35
UBE3D-203ENST00000369747 CARD14Q9BXL6 1004 aa23.49■■□□□ 1.35
UBE3D-203ENST00000369747 NINLQ9Y2I6 1382 aa23.49■■□□□ 1.35
UBE3D-203ENST00000369747 CD163L1Q9NR16 1453 aa23.49■■□□□ 1.35
UBE3D-203ENST00000369747 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
UBE3D-203ENST00000369747 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
UBE3D-203ENST00000369747 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
UBE3D-203ENST00000369747 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
UBE3D-203ENST00000369747 MSH6P52701 1360 aa23.47■■□□□ 1.35
UBE3D-203ENST00000369747 ANKRD36BQ8N2N9 1353 aa23.47■■□□□ 1.35
UBE3D-203ENST00000369747 ATF3P18847 181 aa23.46■■□□□ 1.35
UBE3D-203ENST00000369747 CNGB1Q14028 1251 aaPredicted RBP23.46■■□□□ 1.35
UBE3D-203ENST00000369747 FAM9BQ8IZU0 186 aa23.45■■□□□ 1.35
UBE3D-203ENST00000369747 PMFBP1Q8TBY8 1022 aa23.45■■□□□ 1.34
UBE3D-203ENST00000369747 DCCP43146 1447 aa23.44■■□□□ 1.34
UBE3D-203ENST00000369747 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
UBE3D-203ENST00000369747 ITSN1Q15811 1721 aa23.43■■□□□ 1.34
UBE3D-203ENST00000369747 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
UBE3D-203ENST00000369747 PLEKHG3A1L390 1219 aa23.42■■□□□ 1.34
UBE3D-203ENST00000369747 CADPS2Q86UW7 1296 aa23.42■■□□□ 1.34
UBE3D-203ENST00000369747 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
UBE3D-203ENST00000369747 ACEP12821 1306 aa23.42■■□□□ 1.34
UBE3D-203ENST00000369747 CPSF1Q10570 1443 aaKnown RBP23.41■■□□□ 1.34
UBE3D-203ENST00000369747 ESCO1Q5FWF5 840 aa23.41■■□□□ 1.34
UBE3D-203ENST00000369747 MST1RQ04912 1400 aa23.41■■□□□ 1.34
UBE3D-203ENST00000369747 NSD3Q9BZ95 1437 aa23.41■■□□□ 1.34
UBE3D-203ENST00000369747 HDGFL2Q7Z4V5 671 aaPredicted RBP23.41■■□□□ 1.34
UBE3D-203ENST00000369747 ORAI2Q96SN7 254 aa23.41■■□□□ 1.34
UBE3D-203ENST00000369747 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
UBE3D-203ENST00000369747 RALBP1Q15311 655 aa23.38■■□□□ 1.33
UBE3D-203ENST00000369747 AMER1Q5JTC6 1135 aaPredicted RBP23.38■■□□□ 1.33
UBE3D-203ENST00000369747 PHF8Q9UPP1 1060 aa23.38■■□□□ 1.33
UBE3D-203ENST00000369747 CC2D1BQ5T0F9 858 aaKnown RBP23.37■■□□□ 1.33
UBE3D-203ENST00000369747 NGDNQ8NEJ9 315 aaKnown RBP23.37■■□□□ 1.33
UBE3D-203ENST00000369747 AKAP12Q02952 1782 aa23.36■■□□□ 1.33
UBE3D-203ENST00000369747 POLR3AO14802 1390 aaPredicted RBP23.36■■□□□ 1.33
UBE3D-203ENST00000369747 ZNF692Q9BU19 519 aaPredicted RBP23.35■■□□□ 1.33
UBE3D-203ENST00000369747 MYBBP1AQ9BQG0 1328 aaKnown RBP23.35■■□□□ 1.33
UBE3D-203ENST00000369747 PARD3Q8TEW0 1356 aa23.34■■□□□ 1.33
UBE3D-203ENST00000369747 MON2Q7Z3U7 1717 aa23.34■■□□□ 1.33
UBE3D-203ENST00000369747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.33■■□□□ 1.33
UBE3D-203ENST00000369747 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
UBE3D-203ENST00000369747 ZBED9Q6R2W3 1325 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms