RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 SYNE3Q6ZMZ3 975 aa16.76■□□□□ 0.27
HIPK1-205ENST00000369558 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
HIPK1-205ENST00000369558 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
HIPK1-205ENST00000369558 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
HIPK1-205ENST00000369558 NEUROD6Q96NK8 337 aa16.75■□□□□ 0.27
HIPK1-205ENST00000369558 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
HIPK1-205ENST00000369558 TRIM29Q14134 588 aa16.74■□□□□ 0.27
HIPK1-205ENST00000369558 HOMER1Q86YM7 354 aa16.74■□□□□ 0.27
HIPK1-205ENST00000369558 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
HIPK1-205ENST00000369558 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
HIPK1-205ENST00000369558 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
HIPK1-205ENST00000369558 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
HIPK1-205ENST00000369558 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
HIPK1-205ENST00000369558 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
HIPK1-205ENST00000369558 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
HIPK1-205ENST00000369558 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
HIPK1-205ENST00000369558 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
HIPK1-205ENST00000369558 PCMTD1Q96MG8 357 aaPredicted RBP16.72■□□□□ 0.27
HIPK1-205ENST00000369558 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
HIPK1-205ENST00000369558 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
HIPK1-205ENST00000369558 MSH5O43196 834 aa16.72■□□□□ 0.27
HIPK1-205ENST00000369558 NUCB2P80303 420 aa16.71■□□□□ 0.27
HIPK1-205ENST00000369558 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
HIPK1-205ENST00000369558 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
HIPK1-205ENST00000369558 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
HIPK1-205ENST00000369558 TRDNQ13061 729 aa16.71■□□□□ 0.27
HIPK1-205ENST00000369558 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
HIPK1-205ENST00000369558 TRAK2O60296 914 aa16.71■□□□□ 0.27
HIPK1-205ENST00000369558 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
HIPK1-205ENST00000369558 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
HIPK1-205ENST00000369558 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
HIPK1-205ENST00000369558 ZNF771Q7L3S4 317 aaPredicted RBP16.7■□□□□ 0.26
HIPK1-205ENST00000369558 IFT57Q9NWB7 429 aa16.7■□□□□ 0.26
HIPK1-205ENST00000369558 IL27Q8NEV9 243 aa16.7■□□□□ 0.26
HIPK1-205ENST00000369558 FYB1O15117 783 aa16.7■□□□□ 0.26
HIPK1-205ENST00000369558 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
HIPK1-205ENST00000369558 DHX16O60231 1041 aaKnown RBP16.69■□□□□ 0.26
HIPK1-205ENST00000369558 CDC45O75419 566 aa16.69■□□□□ 0.26
HIPK1-205ENST00000369558 TPM1P09493 284 aa16.69■□□□□ 0.26
HIPK1-205ENST00000369558 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
HIPK1-205ENST00000369558 PRM3Q9NNZ6 103 aa16.69■□□□□ 0.26
HIPK1-205ENST00000369558 NLRP6P59044 892 aa16.69■□□□□ 0.26
HIPK1-205ENST00000369558 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
HIPK1-205ENST00000369558 NEK4P51957 841 aa16.69■□□□□ 0.26
HIPK1-205ENST00000369558 MPNDQ8N594 471 aa16.68■□□□□ 0.26
HIPK1-205ENST00000369558 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
HIPK1-205ENST00000369558 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
HIPK1-205ENST00000369558 MTMR7Q9Y216 660 aa16.67■□□□□ 0.26
HIPK1-205ENST00000369558 SURF6O75683 361 aaKnown RBP16.67■□□□□ 0.26
HIPK1-205ENST00000369558 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
HIPK1-205ENST00000369558 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
HIPK1-205ENST00000369558 ERC2O15083 957 aa16.67■□□□□ 0.26
HIPK1-205ENST00000369558 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
HIPK1-205ENST00000369558 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
HIPK1-205ENST00000369558 NLRP2Q9NX02 1062 aa16.66■□□□□ 0.26
HIPK1-205ENST00000369558 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
HIPK1-205ENST00000369558 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
HIPK1-205ENST00000369558 MAP4K4O95819 1239 aaPredicted RBP16.66■□□□□ 0.26
HIPK1-205ENST00000369558 CEBPZQ03701 1054 aaKnown RBP16.66■□□□□ 0.26
HIPK1-205ENST00000369558 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
HIPK1-205ENST00000369558 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
HIPK1-205ENST00000369558 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
HIPK1-205ENST00000369558 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
HIPK1-205ENST00000369558 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
HIPK1-205ENST00000369558 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
HIPK1-205ENST00000369558 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
HIPK1-205ENST00000369558 TPM2P07951 284 aa16.63■□□□□ 0.25
HIPK1-205ENST00000369558 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
HIPK1-205ENST00000369558 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
HIPK1-205ENST00000369558 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
HIPK1-205ENST00000369558 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
HIPK1-205ENST00000369558 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 NESP48681 1621 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 ERICH2A1L162 156 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 FIBPO43427 364 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.62■□□□□ 0.25
HIPK1-205ENST00000369558 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
HIPK1-205ENST00000369558 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
HIPK1-205ENST00000369558 SDF4Q9BRK5 362 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 TTLL5Q6EMB2 1281 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 IPO7O95373 1038 aaKnown RBP16.61■□□□□ 0.25
HIPK1-205ENST00000369558 MRE11P49959 708 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
HIPK1-205ENST00000369558 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
HIPK1-205ENST00000369558 SULT6B1Q6IMI4 303 aa16.6■□□□□ 0.25
HIPK1-205ENST00000369558 SIL1Q9H173 461 aa16.6■□□□□ 0.25
HIPK1-205ENST00000369558 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
HIPK1-205ENST00000369558 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
HIPK1-205ENST00000369558 PDILTQ8N807 584 aa16.6■□□□□ 0.25
HIPK1-205ENST00000369558 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
HIPK1-205ENST00000369558 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
HIPK1-205ENST00000369558 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms