RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
LINC01561-201ENST00000369071 KIF3BO15066 747 aa16.17■□□□□ 0.18
LINC01561-201ENST00000369071 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
LINC01561-201ENST00000369071 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
LINC01561-201ENST00000369071 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
LINC01561-201ENST00000369071 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
LINC01561-201ENST00000369071 AAMPQ13685 434 aa16.16■□□□□ 0.18
LINC01561-201ENST00000369071 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
LINC01561-201ENST00000369071 ABCA9Q8IUA7 1624 aa16.15■□□□□ 0.18
LINC01561-201ENST00000369071 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
LINC01561-201ENST00000369071 EFCAB6Q5THR3 1501 aa16.15■□□□□ 0.18
LINC01561-201ENST00000369071 SETBP1Q9Y6X0 1596 aa16.15■□□□□ 0.18
LINC01561-201ENST00000369071 ZMYM3Q14202 1370 aa16.14■□□□□ 0.17
LINC01561-201ENST00000369071 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
LINC01561-201ENST00000369071 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
LINC01561-201ENST00000369071 FANCAO15360 1455 aa16.13■□□□□ 0.17
LINC01561-201ENST00000369071 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
LINC01561-201ENST00000369071 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
LINC01561-201ENST00000369071 ZC3H13Q5T200 1668 aaKnown RBP16.13■□□□□ 0.17
LINC01561-201ENST00000369071 BECN1Q14457 450 aa16.12■□□□□ 0.17
LINC01561-201ENST00000369071 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
LINC01561-201ENST00000369071 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
LINC01561-201ENST00000369071 RLBP1P12271 317 aa16.11■□□□□ 0.17
LINC01561-201ENST00000369071 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
LINC01561-201ENST00000369071 ADGRB3O60242 1522 aa16.11■□□□□ 0.17
LINC01561-201ENST00000369071 NEUROD2Q15784 382 aa16.11■□□□□ 0.17
LINC01561-201ENST00000369071 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
LINC01561-201ENST00000369071 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
LINC01561-201ENST00000369071 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
LINC01561-201ENST00000369071 NOS1P29475 1434 aa16.1■□□□□ 0.17
LINC01561-201ENST00000369071 LMTK2Q8IWU2 1503 aa16.1■□□□□ 0.17
LINC01561-201ENST00000369071 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
LINC01561-201ENST00000369071 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
LINC01561-201ENST00000369071 QRICH2Q9H0J4 1663 aa16.09■□□□□ 0.17
LINC01561-201ENST00000369071 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
LINC01561-201ENST00000369071 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
LINC01561-201ENST00000369071 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
LINC01561-201ENST00000369071 ADGRL1O94910 1474 aa16.08■□□□□ 0.17
LINC01561-201ENST00000369071 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
LINC01561-201ENST00000369071 TBC1D32Q96NH3 1257 aa16.08■□□□□ 0.16
LINC01561-201ENST00000369071 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
LINC01561-201ENST00000369071 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
LINC01561-201ENST00000369071 MTHFSP49914 203 aa16.06■□□□□ 0.16
LINC01561-201ENST00000369071 C14orf93Q9H972 538 aaKnown RBP16.06■□□□□ 0.16
LINC01561-201ENST00000369071 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
LINC01561-201ENST00000369071 POGKQ9P215 609 aa16.06■□□□□ 0.16
LINC01561-201ENST00000369071 PPLO60437 1756 aa16.05■□□□□ 0.16
LINC01561-201ENST00000369071 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
LINC01561-201ENST00000369071 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
LINC01561-201ENST00000369071 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
LINC01561-201ENST00000369071 UPF2Q9HAU5 1272 aaKnown RBP16.04■□□□□ 0.16
LINC01561-201ENST00000369071 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
LINC01561-201ENST00000369071 TBC1D2Q9BYX2 928 aa16.03■□□□□ 0.16
LINC01561-201ENST00000369071 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
LINC01561-201ENST00000369071 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
LINC01561-201ENST00000369071 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
LINC01561-201ENST00000369071 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
LINC01561-201ENST00000369071 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.16
LINC01561-201ENST00000369071 PUS7Q96PZ0 661 aaKnown RBP16.01■□□□□ 0.15
LINC01561-201ENST00000369071 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
LINC01561-201ENST00000369071 TMEM132EQ6IEE7 984 aa16■□□□□ 0.15
LINC01561-201ENST00000369071 NSD2O96028 1365 aa16■□□□□ 0.15
LINC01561-201ENST00000369071 ZKSCAN2Q63HK3 967 aa16■□□□□ 0.15
LINC01561-201ENST00000369071 NPATQ14207 1427 aa16■□□□□ 0.15
LINC01561-201ENST00000369071 ANKRD36BQ8N2N9 1353 aa15.99■□□□□ 0.15
LINC01561-201ENST00000369071 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
LINC01561-201ENST00000369071 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
LINC01561-201ENST00000369071 PRKCSHP14314 528 aaPredicted RBP15.99■□□□□ 0.15
LINC01561-201ENST00000369071 DZIP1LQ8IYY4 767 aaKnown RBP15.99■□□□□ 0.15
LINC01561-201ENST00000369071 TULP4Q9NRJ4 1543 aa15.98■□□□□ 0.15
LINC01561-201ENST00000369071 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
LINC01561-201ENST00000369071 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
LINC01561-201ENST00000369071 GLI2P10070 1586 aa15.97■□□□□ 0.15
LINC01561-201ENST00000369071 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
LINC01561-201ENST00000369071 HDAC1Q13547 482 aaPredicted RBP15.96■□□□□ 0.14
LINC01561-201ENST00000369071 L1TD1Q5T7N2 865 aaKnown RBP15.96■□□□□ 0.14
LINC01561-201ENST00000369071 FTSJ3Q8IY81 847 aaKnown RBP15.96■□□□□ 0.14
LINC01561-201ENST00000369071 ARHGEF28Q8N1W1 1705 aaKnown RBP15.95■□□□□ 0.14
LINC01561-201ENST00000369071 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
LINC01561-201ENST00000369071 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
LINC01561-201ENST00000369071 PLEKHF1Q96S99 279 aa15.94■□□□□ 0.14
LINC01561-201ENST00000369071 FRMPD1Q5SYB0 1578 aa15.94■□□□□ 0.14
LINC01561-201ENST00000369071 TRIM27P14373 513 aa15.93■□□□□ 0.14
LINC01561-201ENST00000369071 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
LINC01561-201ENST00000369071 C22orf23Q9BZE7 217 aa15.93■□□□□ 0.14
LINC01561-201ENST00000369071 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
LINC01561-201ENST00000369071 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
LINC01561-201ENST00000369071 ASXL2Q76L83 1435 aa15.92■□□□□ 0.14
LINC01561-201ENST00000369071 MCM4P33991 863 aa15.92■□□□□ 0.14
LINC01561-201ENST00000369071 COL3A1P02461 1466 aaPredicted RBP15.92■□□□□ 0.14
LINC01561-201ENST00000369071 HECW2Q9P2P5 1572 aa15.92■□□□□ 0.14
LINC01561-201ENST00000369071 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
LINC01561-201ENST00000369071 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
LINC01561-201ENST00000369071 DDX19BQ9UMR2 479 aa15.92■□□□□ 0.14
LINC01561-201ENST00000369071 CFAP65Q6ZU64 1925 aaKnown RBP15.92■□□□□ 0.14
LINC01561-201ENST00000369071 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
LINC01561-201ENST00000369071 SMC5Q8IY18 1101 aa15.91■□□□□ 0.14
LINC01561-201ENST00000369071 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
LINC01561-201ENST00000369071 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
LINC01561-201ENST00000369071 IL16Q14005 1332 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms