RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 PLEKHH1Q9ULM0 1364 aa35.17■■■■□ 3.22
NSMCE4A-201ENST00000369017 LTBP4Q8N2S1 1624 aa35.16■■■■□ 3.22
NSMCE4A-201ENST00000369017 TMF1P82094 1093 aa35.14■■■■□ 3.22
NSMCE4A-201ENST00000369017 CDCA8Q53HL2 280 aa35.14■■■■□ 3.22
NSMCE4A-201ENST00000369017 C19orf44Q9H6X5 657 aa35.14■■■■□ 3.22
NSMCE4A-201ENST00000369017 ADGRL3Q9HAR2 1447 aa35.14■■■■□ 3.22
NSMCE4A-201ENST00000369017 EVC2Q86UK5 1308 aa35.13■■■■□ 3.21
NSMCE4A-201ENST00000369017 MINK1Q8N4C8 1332 aaPredicted RBP35.13■■■■□ 3.21
NSMCE4A-201ENST00000369017 MSH6P52701 1360 aa35.12■■■■□ 3.21
NSMCE4A-201ENST00000369017 ADGRB2O60241 1585 aa35.11■■■■□ 3.21
NSMCE4A-201ENST00000369017 TESK2Q96S53 571 aa35.1■■■■□ 3.21
NSMCE4A-201ENST00000369017 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.09■■■■□ 3.21
NSMCE4A-201ENST00000369017 DCCP43146 1447 aa35.07■■■■□ 3.21
NSMCE4A-201ENST00000369017 NALCNQ8IZF0 1738 aa35.06■■■■□ 3.2
NSMCE4A-201ENST00000369017 RBM33Q96EV2 1170 aaKnown RBP35.06■■■■□ 3.2
NSMCE4A-201ENST00000369017 HIRIP3Q9BW71 556 aaPredicted RBP35.06■■■■□ 3.2
NSMCE4A-201ENST00000369017 WASLO00401 505 aaPredicted RBP35.05■■■■□ 3.2
NSMCE4A-201ENST00000369017 ATF3P18847 181 aa35.05■■■■□ 3.2
NSMCE4A-201ENST00000369017 CADPS2Q86UW7 1296 aa35.05■■■■□ 3.2
NSMCE4A-201ENST00000369017 CDC42BPGQ6DT37 1551 aa35.04■■■■□ 3.2
NSMCE4A-201ENST00000369017 PUS7Q96PZ0 661 aaKnown RBP35.04■■■■□ 3.2
NSMCE4A-201ENST00000369017 IQSEC2Q5JU85 1478 aa35.03■■■■□ 3.2
NSMCE4A-201ENST00000369017 XIRP1Q702N8 1843 aaKnown RBP35.02■■■■□ 3.2
NSMCE4A-201ENST00000369017 SRPK2P78362 688 aaKnown RBP35.01■■■■□ 3.2
NSMCE4A-201ENST00000369017 CDK19Q9BWU1 502 aa35■■■■□ 3.19
NSMCE4A-201ENST00000369017 ATAD2Q6PL18 1390 aa34.95■■■■□ 3.19
NSMCE4A-201ENST00000369017 TULP4Q9NRJ4 1543 aa34.95■■■■□ 3.19
NSMCE4A-201ENST00000369017 ANKARQ7Z5J8 1434 aa34.93■■■■□ 3.18
NSMCE4A-201ENST00000369017 CERKQ8TCT0 537 aa34.93■■■■□ 3.18
NSMCE4A-201ENST00000369017 FMN2Q9NZ56 1722 aa34.92■■■■□ 3.18
NSMCE4A-201ENST00000369017 DISP3Q9P2K9 1392 aa34.91■■■■□ 3.18
NSMCE4A-201ENST00000369017 ZNF316A6NFI3 1004 aaPredicted RBP34.89■■■■□ 3.18
NSMCE4A-201ENST00000369017 CABP2Q9NPB3 220 aa34.89■■■■□ 3.18
NSMCE4A-201ENST00000369017 TOM1O60784 492 aa34.87■■■■□ 3.17
NSMCE4A-201ENST00000369017 NUDT16Q96DE0 195 aaKnown RBP34.87■■■■□ 3.17
NSMCE4A-201ENST00000369017 CCDC61Q9Y6R9 512 aa34.87■■■■□ 3.17
NSMCE4A-201ENST00000369017 NINLQ9Y2I6 1382 aa34.87■■■■□ 3.17
NSMCE4A-201ENST00000369017 ITSN1Q15811 1721 aa34.84■■■■□ 3.17
NSMCE4A-201ENST00000369017 POLR3GLQ9BT43 218 aa34.83■■■■□ 3.17
NSMCE4A-201ENST00000369017 SLAIN2Q9P270 581 aa34.82■■■■□ 3.16
NSMCE4A-201ENST00000369017 MST1RQ04912 1400 aa34.81■■■■□ 3.16
NSMCE4A-201ENST00000369017 KIF7Q2M1P5 1343 aa34.81■■■■□ 3.16
NSMCE4A-201ENST00000369017 ATP7BP35670 1465 aa34.8■■■■□ 3.16
NSMCE4A-201ENST00000369017 CCDC7Q96M83 1385 aa34.8■■■■□ 3.16
NSMCE4A-201ENST00000369017 NUTM2FA1L443 756 aa34.8■■■■□ 3.16
NSMCE4A-201ENST00000369017 C1orf167Q5SNV9 1468 aa34.79■■■■□ 3.16
NSMCE4A-201ENST00000369017 C11orf95C9JLR9 678 aaPredicted RBP34.78■■■■□ 3.16
NSMCE4A-201ENST00000369017 TMC1Q8TDI8 760 aa34.77■■■■□ 3.16
NSMCE4A-201ENST00000369017 PPIP5K1Q6PFW1 1433 aa34.76■■■■□ 3.16
NSMCE4A-201ENST00000369017 ESCO1Q5FWF5 840 aa34.76■■■■□ 3.16
NSMCE4A-201ENST00000369017 WASHC2AQ641Q2 1341 aa34.76■■■■□ 3.15
NSMCE4A-201ENST00000369017 USP32Q8NFA0 1604 aa34.75■■■■□ 3.15
NSMCE4A-201ENST00000369017 PRR36Q9H6K5 1346 aa34.75■■■■□ 3.15
NSMCE4A-201ENST00000369017 PLEKHG3A1L390 1219 aa34.73■■■■□ 3.15
NSMCE4A-201ENST00000369017 TERF2IPQ9NYB0 399 aa34.73■■■■□ 3.15
NSMCE4A-201ENST00000369017 TOPAZ1Q8N9V7 1692 aa34.73■■■■□ 3.15
NSMCE4A-201ENST00000369017 UBAP1LF5GYI3 381 aa34.72■■■■□ 3.15
NSMCE4A-201ENST00000369017 PHF8Q9UPP1 1060 aa34.72■■■■□ 3.15
NSMCE4A-201ENST00000369017 KIF1AQ12756 1690 aa34.72■■■■□ 3.15
NSMCE4A-201ENST00000369017 RGPD8O14715 1765 aaPredicted RBP34.72■■■■□ 3.15
NSMCE4A-201ENST00000369017 CABP1Q9NZU7 370 aa34.71■■■■□ 3.15
NSMCE4A-201ENST00000369017 HDGFL2Q7Z4V5 671 aaPredicted RBP34.7■■■■□ 3.15
NSMCE4A-201ENST00000369017 ZNF692Q9BU19 519 aaPredicted RBP34.7■■■■□ 3.15
NSMCE4A-201ENST00000369017 NGDNQ8NEJ9 315 aaKnown RBP34.68■■■■□ 3.14
NSMCE4A-201ENST00000369017 SLC12A5Q9H2X9 1139 aa34.66■■■■□ 3.14
NSMCE4A-201ENST00000369017 ORAI2Q96SN7 254 aa34.65■■■■□ 3.14
NSMCE4A-201ENST00000369017 PMFBP1Q8TBY8 1022 aa34.63■■■■□ 3.13
NSMCE4A-201ENST00000369017 POLR3AO14802 1390 aaPredicted RBP34.62■■■■□ 3.13
NSMCE4A-201ENST00000369017 ANKRD36BQ8N2N9 1353 aa34.62■■■■□ 3.13
NSMCE4A-201ENST00000369017 BRINP3Q76B58 766 aa34.62■■■■□ 3.13
NSMCE4A-201ENST00000369017 MYOM1P52179 1685 aa34.62■■■■□ 3.13
NSMCE4A-201ENST00000369017 ACEP12821 1306 aa34.61■■■■□ 3.13
NSMCE4A-201ENST00000369017 NPHP3Q7Z494 1330 aa34.61■■■■□ 3.13
NSMCE4A-201ENST00000369017 BRD4O60885 1362 aaPredicted RBP34.6■■■■□ 3.13
NSMCE4A-201ENST00000369017 PSME1Q06323 249 aa34.59■■■■□ 3.13
NSMCE4A-201ENST00000369017 ROBO1Q9Y6N7 1651 aa34.57■■■■□ 3.12
NSMCE4A-201ENST00000369017 SCAF1Q9H7N4 1312 aaKnown RBP34.56■■■■□ 3.12
NSMCE4A-201ENST00000369017 CPSF1Q10570 1443 aaKnown RBP34.56■■■■□ 3.12
NSMCE4A-201ENST00000369017 KTN1Q86UP2 1357 aaKnown RBP34.56■■■■□ 3.12
NSMCE4A-201ENST00000369017 FOXO3O43524 673 aa34.55■■■■□ 3.12
NSMCE4A-201ENST00000369017 PIP4K2BP78356 416 aa34.55■■■■□ 3.12
NSMCE4A-201ENST00000369017 PANK3Q9H999 370 aa34.54■■■■□ 3.12
NSMCE4A-201ENST00000369017 AKAP12Q02952 1782 aa34.54■■■■□ 3.12
NSMCE4A-201ENST00000369017 A0A1W2PP64 1363 aa34.52■■■■□ 3.12
NSMCE4A-201ENST00000369017 DDX10Q13206 875 aaKnown RBP34.5■■■■□ 3.11
NSMCE4A-201ENST00000369017 CD163L1Q9NR16 1453 aa34.5■■■■□ 3.11
NSMCE4A-201ENST00000369017 USP6P35125 1406 aa34.49■■■■□ 3.11
NSMCE4A-201ENST00000369017 KRT28Q7Z3Y7 464 aa34.49■■■■□ 3.11
NSMCE4A-201ENST00000369017 EDC4Q6P2E9 1401 aaKnown RBP34.48■■■■□ 3.11
NSMCE4A-201ENST00000369017 MON2Q7Z3U7 1717 aa34.48■■■■□ 3.11
NSMCE4A-201ENST00000369017 KNSTRNQ9Y448 316 aa34.48■■■■□ 3.11
NSMCE4A-201ENST00000369017 NHSL1Q5SYE7 1610 aa34.47■■■■□ 3.11
NSMCE4A-201ENST00000369017 TTC21AQ8NDW8 1320 aa34.46■■■■□ 3.11
NSMCE4A-201ENST00000369017 AHDC1Q5TGY3 1603 aaPredicted RBP34.45■■■■□ 3.11
NSMCE4A-201ENST00000369017 SBNO1A3KN83 1393 aa34.43■■■■□ 3.1
NSMCE4A-201ENST00000369017 NSD3Q9BZ95 1437 aa34.41■■■■□ 3.1
NSMCE4A-201ENST00000369017 SOS2Q07890 1332 aaPredicted RBP34.41■■■■□ 3.1
NSMCE4A-201ENST00000369017 CGNL1Q0VF96 1302 aa34.41■■■■□ 3.1
NSMCE4A-201ENST00000369017 PAK3O75914 559 aaPredicted RBP34.41■■■■□ 3.1
NSMCE4A-201ENST00000369017 TTC21BQ7Z4L5 1316 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms