RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 CCDC144AA2RUR9 1427 aa12.9□□□□□ -0.34
SCNM1-201ENST00000368902 PRAG1Q86YV5 1406 aa12.9□□□□□ -0.34
SCNM1-201ENST00000368902 ATAD2Q6PL18 1390 aa12.9□□□□□ -0.34
SCNM1-201ENST00000368902 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
SCNM1-201ENST00000368902 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
SCNM1-201ENST00000368902 ROBO2Q9HCK4 1378 aa12.88□□□□□ -0.35
SCNM1-201ENST00000368902 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
SCNM1-201ENST00000368902 EP400Q96L91 3159 aa12.88□□□□□ -0.35
SCNM1-201ENST00000368902 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
SCNM1-201ENST00000368902 MYOM2P54296 1465 aa12.86□□□□□ -0.35
SCNM1-201ENST00000368902 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
SCNM1-201ENST00000368902 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
SCNM1-201ENST00000368902 ATRNO75882 1429 aa12.85□□□□□ -0.35
SCNM1-201ENST00000368902 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
SCNM1-201ENST00000368902 USP21Q9UK80 565 aa12.84□□□□□ -0.35
SCNM1-201ENST00000368902 ADGRF5Q8IZF2 1346 aa12.84□□□□□ -0.35
SCNM1-201ENST00000368902 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
SCNM1-201ENST00000368902 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
SCNM1-201ENST00000368902 TRPC5Q9UL62 973 aaPredicted RBP12.83□□□□□ -0.36
SCNM1-201ENST00000368902 PPLO60437 1756 aa12.83□□□□□ -0.36
SCNM1-201ENST00000368902 PXDNQ92626 1479 aa12.83□□□□□ -0.36
SCNM1-201ENST00000368902 MARF1Q9Y4F3 1742 aaKnown RBP12.81□□□□□ -0.36
SCNM1-201ENST00000368902 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
SCNM1-201ENST00000368902 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
SCNM1-201ENST00000368902 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
SCNM1-201ENST00000368902 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
SCNM1-201ENST00000368902 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
SCNM1-201ENST00000368902 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
SCNM1-201ENST00000368902 TECPR2O15040 1411 aa12.78□□□□□ -0.36
SCNM1-201ENST00000368902 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
SCNM1-201ENST00000368902 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.36
SCNM1-201ENST00000368902 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
SCNM1-201ENST00000368902 C14orf93Q9H972 538 aaKnown RBP12.77□□□□□ -0.37
SCNM1-201ENST00000368902 STK26Q9P289 416 aa12.77□□□□□ -0.37
SCNM1-201ENST00000368902 USP32Q8NFA0 1604 aa12.77□□□□□ -0.37
SCNM1-201ENST00000368902 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
SCNM1-201ENST00000368902 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
SCNM1-201ENST00000368902 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
SCNM1-201ENST00000368902 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
SCNM1-201ENST00000368902 ZRANB1Q9UGI0 708 aa12.76□□□□□ -0.37
SCNM1-201ENST00000368902 GLI3P10071 1580 aa12.75□□□□□ -0.37
SCNM1-201ENST00000368902 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
SCNM1-201ENST00000368902 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
SCNM1-201ENST00000368902 FMN2Q9NZ56 1722 aa12.75□□□□□ -0.37
SCNM1-201ENST00000368902 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
SCNM1-201ENST00000368902 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
SCNM1-201ENST00000368902 SLIT2O94813 1529 aa12.73□□□□□ -0.37
SCNM1-201ENST00000368902 BLMP54132 1417 aaPredicted RBP12.72□□□□□ -0.37
SCNM1-201ENST00000368902 FOXO3O43524 673 aa12.72□□□□□ -0.37
SCNM1-201ENST00000368902 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
SCNM1-201ENST00000368902 PIK3C2GO75747 1445 aa12.71□□□□□ -0.37
SCNM1-201ENST00000368902 ABCC11Q96J66 1382 aa12.71□□□□□ -0.37
SCNM1-201ENST00000368902 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
SCNM1-201ENST00000368902 CCDC125Q86Z20 511 aa12.71□□□□□ -0.37
SCNM1-201ENST00000368902 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
SCNM1-201ENST00000368902 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
SCNM1-201ENST00000368902 ABCA3Q99758 1704 aa12.71□□□□□ -0.38
SCNM1-201ENST00000368902 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.38
SCNM1-201ENST00000368902 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
SCNM1-201ENST00000368902 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
SCNM1-201ENST00000368902 NUTM2FA1L443 756 aa12.7□□□□□ -0.38
SCNM1-201ENST00000368902 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
SCNM1-201ENST00000368902 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
SCNM1-201ENST00000368902 SPATA31A3Q5VYP0 1347 aa12.68□□□□□ -0.38
SCNM1-201ENST00000368902 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
SCNM1-201ENST00000368902 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
SCNM1-201ENST00000368902 LRP5O75197 1615 aa12.68□□□□□ -0.38
SCNM1-201ENST00000368902 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
SCNM1-201ENST00000368902 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
SCNM1-201ENST00000368902 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
SCNM1-201ENST00000368902 HAP1P54257 671 aaPredicted RBP12.66□□□□□ -0.38
SCNM1-201ENST00000368902 POGKQ9P215 609 aa12.66□□□□□ -0.38
SCNM1-201ENST00000368902 TRAK1Q9UPV9 953 aa12.66□□□□□ -0.38
SCNM1-201ENST00000368902 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
SCNM1-201ENST00000368902 PRAM1Q96QH2 718 aa12.65□□□□□ -0.38
SCNM1-201ENST00000368902 SAFB2Q14151 953 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCNM1-201ENST00000368902 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
SCNM1-201ENST00000368902 PSME1Q06323 249 aa12.63□□□□□ -0.39
SCNM1-201ENST00000368902 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
SCNM1-201ENST00000368902 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
SCNM1-201ENST00000368902 ARHGEF10O15013 1369 aa12.63□□□□□ -0.39
SCNM1-201ENST00000368902 ADGRB2O60241 1585 aa12.63□□□□□ -0.39
SCNM1-201ENST00000368902 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
SCNM1-201ENST00000368902 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
SCNM1-201ENST00000368902 VPS72Q15906 364 aa12.62□□□□□ -0.39
SCNM1-201ENST00000368902 KRT28Q7Z3Y7 464 aa12.62□□□□□ -0.39
SCNM1-201ENST00000368902 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
SCNM1-201ENST00000368902 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
SCNM1-201ENST00000368902 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
SCNM1-201ENST00000368902 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
SCNM1-201ENST00000368902 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
SCNM1-201ENST00000368902 A0A0G2JS52 829 aa12.6□□□□□ -0.39
SCNM1-201ENST00000368902 MYT1Q01538 1121 aa12.6□□□□□ -0.39
SCNM1-201ENST00000368902 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
SCNM1-201ENST00000368902 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
SCNM1-201ENST00000368902 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
SCNM1-201ENST00000368902 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
SCNM1-201ENST00000368902 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
SCNM1-201ENST00000368902 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
SCNM1-201ENST00000368902 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms