RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
SNX27-202ENST00000368841 GPS2Q13227 327 aa22■■□□□ 1.11
SNX27-202ENST00000368841 RRP12Q5JTH9 1297 aaKnown RBP22■■□□□ 1.11
SNX27-202ENST00000368841 MAP4K4O95819 1239 aaPredicted RBP22■■□□□ 1.11
SNX27-202ENST00000368841 HSP90AB2PQ58FF8 381 aa22■■□□□ 1.11
SNX27-202ENST00000368841 VGFO15240 615 aaPredicted RBP22■■□□□ 1.11
SNX27-202ENST00000368841 CEBPZQ03701 1054 aaKnown RBP22■■□□□ 1.11
SNX27-202ENST00000368841 SKOR2Q2VWA4 1001 aaPredicted RBP22■■□□□ 1.11
SNX27-202ENST00000368841 DHX37Q8IY37 1157 aaKnown RBP22■■□□□ 1.11
SNX27-202ENST00000368841 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
SNX27-202ENST00000368841 RNF214Q8ND24 703 aa21.98■■□□□ 1.11
SNX27-202ENST00000368841 RNF20Q5VTR2 975 aa21.98■■□□□ 1.11
SNX27-202ENST00000368841 RBM42Q9BTD8 480 aaKnown RBP21.98■■□□□ 1.11
SNX27-202ENST00000368841 HOOK1Q9UJC3 728 aaKnown RBP21.98■■□□□ 1.11
SNX27-202ENST00000368841 BRPF1P55201 1214 aaPredicted RBP21.97■■□□□ 1.11
SNX27-202ENST00000368841 STRN4Q9NRL3 753 aa21.97■■□□□ 1.11
SNX27-202ENST00000368841 ATF3P18847 181 aa21.97■■□□□ 1.11
SNX27-202ENST00000368841 RALYLQ86SE5 291 aaKnown RBP21.96■■□□□ 1.11
SNX27-202ENST00000368841 RUFY1Q96T51 708 aa21.96■■□□□ 1.11
SNX27-202ENST00000368841 RAPGEF4Q8WZA2 1011 aa21.96■■□□□ 1.11
SNX27-202ENST00000368841 ATP2B2Q01814 1243 aa21.96■■□□□ 1.11
SNX27-202ENST00000368841 INTS3Q68E01 1043 aaKnown RBP21.96■■□□□ 1.11
SNX27-202ENST00000368841 PRKRIP1Q9H875 184 aaPredicted RBP21.96■■□□□ 1.11
SNX27-202ENST00000368841 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
SNX27-202ENST00000368841 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
SNX27-202ENST00000368841 CAGE1Q8TC20 777 aa21.95■■□□□ 1.1
SNX27-202ENST00000368841 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
SNX27-202ENST00000368841 SAFBQ15424 915 aaKnown RBP eCLIP21.94■■□□□ 1.1
SNX27-202ENST00000368841 IBSPP21815 317 aaPredicted RBP21.93■■□□□ 1.1
SNX27-202ENST00000368841 FSD1Q9BTV5 496 aa21.93■■□□□ 1.1
SNX27-202ENST00000368841 CCDC73Q6ZRK6 1079 aa21.92■■□□□ 1.1
SNX27-202ENST00000368841 RUNDC1Q96C34 613 aa21.92■■□□□ 1.1
SNX27-202ENST00000368841 FMNL2Q96PY5 1086 aa21.91■■□□□ 1.1
SNX27-202ENST00000368841 NUTM2BA6NNL0 878 aaPredicted RBP21.91■■□□□ 1.1
SNX27-202ENST00000368841 NUTM2EB1AL46 878 aaPredicted RBP21.91■■□□□ 1.1
SNX27-202ENST00000368841 UBTFL1P0CB47 393 aaPredicted RBP21.91■■□□□ 1.1
SNX27-202ENST00000368841 NUTM2AQ8IVF1 878 aaPredicted RBP21.91■■□□□ 1.1
SNX27-202ENST00000368841 SPINK5Q9NQ38 1064 aaPredicted RBP21.91■■□□□ 1.1
SNX27-202ENST00000368841 STK3Q13188 491 aa21.91■■□□□ 1.1
SNX27-202ENST00000368841 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
SNX27-202ENST00000368841 MNS1Q8NEH6 495 aa21.9■■□□□ 1.1
SNX27-202ENST00000368841 C22orf23Q9BZE7 217 aa21.9■■□□□ 1.1
SNX27-202ENST00000368841 OLFM4Q6UX06 510 aa21.9■■□□□ 1.1
SNX27-202ENST00000368841 MPNDQ8N594 471 aa21.9■■□□□ 1.1
SNX27-202ENST00000368841 R3HCC1Q9Y3T6 440 aaKnown RBP21.89■■□□□ 1.1
SNX27-202ENST00000368841 ERC2O15083 957 aa21.89■■□□□ 1.09
SNX27-202ENST00000368841 SMC2O95347 1197 aa21.89■■□□□ 1.09
SNX27-202ENST00000368841 RSPH6AQ9H0K4 717 aa21.89■■□□□ 1.09
SNX27-202ENST00000368841 SIL1Q9H173 461 aa21.89■■□□□ 1.09
SNX27-202ENST00000368841 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 OFD1O75665 1012 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 FAM69CQ0P6D2 419 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 ESCO1Q5FWF5 840 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 TEX35Q5T0J7 233 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 ZBED9Q6R2W3 1325 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 BRMS1Q9HCU9 246 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 PAF1Q8N7H5 531 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 AK7Q96M32 723 aa21.87■■□□□ 1.09
SNX27-202ENST00000368841 CHMP5Q9NZZ3 219 aa21.86■■□□□ 1.09
SNX27-202ENST00000368841 SPC24Q8NBT2 197 aa21.86■■□□□ 1.09
SNX27-202ENST00000368841 DHX57Q6P158 1386 aaKnown RBP21.85■■□□□ 1.09
SNX27-202ENST00000368841 NLRP6P59044 892 aa21.85■■□□□ 1.09
SNX27-202ENST00000368841 TTC39AQ5SRH9 613 aa21.85■■□□□ 1.09
SNX27-202ENST00000368841 ZNF644Q9H582 1327 aaPredicted RBP21.84■■□□□ 1.09
SNX27-202ENST00000368841 KIF6Q6ZMV9 814 aa21.84■■□□□ 1.09
SNX27-202ENST00000368841 ABTB2Q8N961 1025 aa21.84■■□□□ 1.09
SNX27-202ENST00000368841 CCAR1Q8IX12 1150 aaKnown RBP21.84■■□□□ 1.09
SNX27-202ENST00000368841 CNTROBQ8N137 903 aa21.84■■□□□ 1.09
SNX27-202ENST00000368841 PIBF1Q8WXW3 757 aa21.83■■□□□ 1.09
SNX27-202ENST00000368841 SDF4Q9BRK5 362 aa21.83■■□□□ 1.09
SNX27-202ENST00000368841 NINLQ9Y2I6 1382 aa21.83■■□□□ 1.08
SNX27-202ENST00000368841 ZHX3Q9H4I2 956 aa21.83■■□□□ 1.08
SNX27-202ENST00000368841 MYL6BP14649 208 aa21.82■■□□□ 1.08
SNX27-202ENST00000368841 CAVIN1Q6NZI2 390 aaKnown RBP21.82■■□□□ 1.08
SNX27-202ENST00000368841 CDK5RAP3Q96JB5 506 aa21.82■■□□□ 1.08
SNX27-202ENST00000368841 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
SNX27-202ENST00000368841 GNAI1P63096 354 aa21.82■■□□□ 1.08
SNX27-202ENST00000368841 RSPH4AQ5TD94 716 aa21.82■■□□□ 1.08
SNX27-202ENST00000368841 CNNM1Q9NRU3 951 aa21.82■■□□□ 1.08
SNX27-202ENST00000368841 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
SNX27-202ENST00000368841 DDX54Q8TDD1 881 aaKnown RBP21.81■■□□□ 1.08
SNX27-202ENST00000368841 KRT18P05783 430 aaKnown RBP21.8■■□□□ 1.08
SNX27-202ENST00000368841 RBM5P52756 815 aaKnown RBP eCLIP21.8■■□□□ 1.08
SNX27-202ENST00000368841 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
SNX27-202ENST00000368841 CDC45O75419 566 aa21.79■■□□□ 1.08
SNX27-202ENST00000368841 MAP7D2Q96T17 732 aa21.78■■□□□ 1.08
SNX27-202ENST00000368841 PLCD4Q9BRC7 762 aa21.78■■□□□ 1.08
SNX27-202ENST00000368841 PTPRGP23470 1445 aa21.78■■□□□ 1.08
SNX27-202ENST00000368841 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
SNX27-202ENST00000368841 PRPF40AO75400 957 aaKnown RBP21.77■■□□□ 1.08
SNX27-202ENST00000368841 TRIM5Q9C035 493 aa21.77■■□□□ 1.08
SNX27-202ENST00000368841 TBC1D2BQ9UPU7 963 aa21.77■■□□□ 1.08
SNX27-202ENST00000368841 FAM43AQ8N2R8 423 aa21.77■■□□□ 1.08
SNX27-202ENST00000368841 XBP1P17861 261 aa21.77■■□□□ 1.07
SNX27-202ENST00000368841 ADAMTS8Q9UP79 889 aa21.76■■□□□ 1.07
SNX27-202ENST00000368841 FIBPO43427 364 aa21.76■■□□□ 1.07
SNX27-202ENST00000368841 NASPP49321 788 aaPredicted RBP21.76■■□□□ 1.07
SNX27-202ENST00000368841 MTHFSP49914 203 aa21.76■■□□□ 1.07
SNX27-202ENST00000368841 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
SNX27-202ENST00000368841 NOB1Q9ULX3 412 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms