RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
TUBE1-202ENST00000368662 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
TUBE1-202ENST00000368662 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
TUBE1-202ENST00000368662 KCNA6P17658 529 aa17.03■□□□□ 0.32
TUBE1-202ENST00000368662 STRCQ7RTU9 1775 aa17.02■□□□□ 0.32
TUBE1-202ENST00000368662 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
TUBE1-202ENST00000368662 TULP4Q9NRJ4 1543 aa17.02■□□□□ 0.31
TUBE1-202ENST00000368662 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
TUBE1-202ENST00000368662 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
TUBE1-202ENST00000368662 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
TUBE1-202ENST00000368662 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
TUBE1-202ENST00000368662 ATAD2Q6PL18 1390 aa16.98■□□□□ 0.31
TUBE1-202ENST00000368662 SRPK2P78362 688 aaKnown RBP16.98■□□□□ 0.31
TUBE1-202ENST00000368662 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
TUBE1-202ENST00000368662 NINLQ9Y2I6 1382 aa16.97■□□□□ 0.31
TUBE1-202ENST00000368662 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
TUBE1-202ENST00000368662 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.95■□□□□ 0.3
TUBE1-202ENST00000368662 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
TUBE1-202ENST00000368662 MYOM1P52179 1685 aa16.94■□□□□ 0.3
TUBE1-202ENST00000368662 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
TUBE1-202ENST00000368662 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
TUBE1-202ENST00000368662 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
TUBE1-202ENST00000368662 PANK3Q9H999 370 aa16.91■□□□□ 0.3
TUBE1-202ENST00000368662 ADGRL3Q9HAR2 1447 aa16.91■□□□□ 0.3
TUBE1-202ENST00000368662 ANP32CO43423 234 aa16.9■□□□□ 0.3
TUBE1-202ENST00000368662 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
TUBE1-202ENST00000368662 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
TUBE1-202ENST00000368662 NUDT16Q96DE0 195 aaKnown RBP16.88■□□□□ 0.29
TUBE1-202ENST00000368662 SLC12A5Q9H2X9 1139 aa16.88■□□□□ 0.29
TUBE1-202ENST00000368662 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
TUBE1-202ENST00000368662 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
TUBE1-202ENST00000368662 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
TUBE1-202ENST00000368662 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 ATP7BP35670 1465 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 STRCP1A6NGW2 1772 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
TUBE1-202ENST00000368662 TMEM94Q12767 1356 aa16.86■□□□□ 0.29
TUBE1-202ENST00000368662 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
TUBE1-202ENST00000368662 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
TUBE1-202ENST00000368662 C19orf44Q9H6X5 657 aa16.85■□□□□ 0.29
TUBE1-202ENST00000368662 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
TUBE1-202ENST00000368662 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
TUBE1-202ENST00000368662 MIER1Q8N108 512 aa16.84■□□□□ 0.29
TUBE1-202ENST00000368662 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
TUBE1-202ENST00000368662 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
TUBE1-202ENST00000368662 DCCP43146 1447 aa16.84■□□□□ 0.29
TUBE1-202ENST00000368662 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
TUBE1-202ENST00000368662 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.28
TUBE1-202ENST00000368662 TOPAZ1Q8N9V7 1692 aa16.82■□□□□ 0.28
TUBE1-202ENST00000368662 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
TUBE1-202ENST00000368662 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
TUBE1-202ENST00000368662 ITSN1Q15811 1721 aa16.82■□□□□ 0.28
TUBE1-202ENST00000368662 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
TUBE1-202ENST00000368662 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
TUBE1-202ENST00000368662 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
TUBE1-202ENST00000368662 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
TUBE1-202ENST00000368662 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
TUBE1-202ENST00000368662 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
TUBE1-202ENST00000368662 NSD3Q9BZ95 1437 aa16.8■□□□□ 0.28
TUBE1-202ENST00000368662 MSH6P52701 1360 aa16.8■□□□□ 0.28
TUBE1-202ENST00000368662 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
TUBE1-202ENST00000368662 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
TUBE1-202ENST00000368662 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
TUBE1-202ENST00000368662 ATF3P18847 181 aa16.79■□□□□ 0.28
TUBE1-202ENST00000368662 RALBP1Q15311 655 aa16.79■□□□□ 0.28
TUBE1-202ENST00000368662 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
TUBE1-202ENST00000368662 AMER1Q5JTC6 1135 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-202ENST00000368662 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
TUBE1-202ENST00000368662 NSD2O96028 1365 aa16.77■□□□□ 0.27
TUBE1-202ENST00000368662 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
TUBE1-202ENST00000368662 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-202ENST00000368662 ACEP12821 1306 aa16.75■□□□□ 0.27
TUBE1-202ENST00000368662 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
TUBE1-202ENST00000368662 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
TUBE1-202ENST00000368662 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
TUBE1-202ENST00000368662 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
TUBE1-202ENST00000368662 NGDNQ8NEJ9 315 aaKnown RBP16.74■□□□□ 0.27
TUBE1-202ENST00000368662 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
TUBE1-202ENST00000368662 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
TUBE1-202ENST00000368662 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
TUBE1-202ENST00000368662 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
TUBE1-202ENST00000368662 ESCO1Q5FWF5 840 aa16.73■□□□□ 0.27
TUBE1-202ENST00000368662 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
TUBE1-202ENST00000368662 PMFBP1Q8TBY8 1022 aa16.73■□□□□ 0.27
TUBE1-202ENST00000368662 MST1RQ04912 1400 aa16.72■□□□□ 0.27
TUBE1-202ENST00000368662 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
TUBE1-202ENST00000368662 USP6P35125 1406 aa16.72■□□□□ 0.27
TUBE1-202ENST00000368662 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
TUBE1-202ENST00000368662 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-202ENST00000368662 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.27
TUBE1-202ENST00000368662 KIF1AQ12756 1690 aa16.69■□□□□ 0.26
TUBE1-202ENST00000368662 FYB1O15117 783 aa16.69■□□□□ 0.26
TUBE1-202ENST00000368662 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
TUBE1-202ENST00000368662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.68■□□□□ 0.26
TUBE1-202ENST00000368662 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
TUBE1-202ENST00000368662 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
TUBE1-202ENST00000368662 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms