RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
EBF3-202ENST00000368648 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
EBF3-202ENST00000368648 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
EBF3-202ENST00000368648 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
EBF3-202ENST00000368648 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.28
EBF3-202ENST00000368648 GGNBP2Q9H3C7 697 aa13.27□□□□□ -0.28
EBF3-202ENST00000368648 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.28
EBF3-202ENST00000368648 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.28
EBF3-202ENST00000368648 UQCRHLA0A096LP55 91 aa13.27□□□□□ -0.29
EBF3-202ENST00000368648 UQCRHP07919 91 aa13.27□□□□□ -0.29
EBF3-202ENST00000368648 EVA1CP58658 441 aa13.27□□□□□ -0.29
EBF3-202ENST00000368648 CHMP4BQ9H444 224 aaKnown RBP13.27□□□□□ -0.29
EBF3-202ENST00000368648 MIA2Q96PC5 1412 aa13.27□□□□□ -0.29
EBF3-202ENST00000368648 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
EBF3-202ENST00000368648 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
EBF3-202ENST00000368648 TBC1D2Q9BYX2 928 aa13.26□□□□□ -0.29
EBF3-202ENST00000368648 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
EBF3-202ENST00000368648 DISP1Q96F81 1524 aa13.26□□□□□ -0.29
EBF3-202ENST00000368648 ERCC6L2Q5T890 1561 aa13.26□□□□□ -0.29
EBF3-202ENST00000368648 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
EBF3-202ENST00000368648 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
EBF3-202ENST00000368648 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
EBF3-202ENST00000368648 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
EBF3-202ENST00000368648 TPM2P07951 284 aa13.25□□□□□ -0.29
EBF3-202ENST00000368648 PLEKHH2Q8IVE3 1493 aa13.24□□□□□ -0.29
EBF3-202ENST00000368648 DAPK1P53355 1430 aa13.24□□□□□ -0.29
EBF3-202ENST00000368648 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
EBF3-202ENST00000368648 PPP2R1AP30153 589 aa13.23□□□□□ -0.29
EBF3-202ENST00000368648 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
EBF3-202ENST00000368648 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
EBF3-202ENST00000368648 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
EBF3-202ENST00000368648 CBX1P83916 185 aa13.23□□□□□ -0.29
EBF3-202ENST00000368648 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
EBF3-202ENST00000368648 SLC52A1Q9NWF4 448 aa13.23□□□□□ -0.29
EBF3-202ENST00000368648 NLRP6P59044 892 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 FBXO31Q5XUX0 539 aaPredicted RBP13.22□□□□□ -0.29
EBF3-202ENST00000368648 CCAR2Q8N163 923 aaKnown RBP13.22□□□□□ -0.29
EBF3-202ENST00000368648 KIAA0556O60303 1618 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 NUP153P49790 1475 aaKnown RBP13.22□□□□□ -0.29
EBF3-202ENST00000368648 NRDCO43847 1150 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 IGHDP01880 384 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 SEC24BO95487 1268 aa13.22□□□□□ -0.29
EBF3-202ENST00000368648 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
EBF3-202ENST00000368648 ANO2Q9NQ90 1003 aa13.21□□□□□ -0.29
EBF3-202ENST00000368648 ADGRL1O94910 1474 aa13.21□□□□□ -0.29
EBF3-202ENST00000368648 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.3
EBF3-202ENST00000368648 WDR7Q9Y4E6 1490 aa13.21□□□□□ -0.3
EBF3-202ENST00000368648 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
EBF3-202ENST00000368648 FANCAO15360 1455 aa13.2□□□□□ -0.3
EBF3-202ENST00000368648 SYTL4Q96C24 671 aaPredicted RBP13.2□□□□□ -0.3
EBF3-202ENST00000368648 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
EBF3-202ENST00000368648 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
EBF3-202ENST00000368648 CSPP1Q1MSJ5 1256 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 IGSF3O75054 1194 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 ANKLE2Q86XL3 938 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 HMOX1P09601 288 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 RIPK4P57078 832 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 SLC12A5Q9H2X9 1139 aa13.19□□□□□ -0.3
EBF3-202ENST00000368648 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
EBF3-202ENST00000368648 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
EBF3-202ENST00000368648 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
EBF3-202ENST00000368648 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
EBF3-202ENST00000368648 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
EBF3-202ENST00000368648 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
EBF3-202ENST00000368648 TEFQ10587 303 aa13.18□□□□□ -0.3
EBF3-202ENST00000368648 ZSCAN30Q86W11 494 aa13.18□□□□□ -0.3
EBF3-202ENST00000368648 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 PHF14O94880 888 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 MTHFSP49914 203 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 NEK4P51957 841 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 DIAPH1O60610 1272 aaKnown RBP13.17□□□□□ -0.3
EBF3-202ENST00000368648 FOSBP53539 338 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
EBF3-202ENST00000368648 NUCB2P80303 420 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
EBF3-202ENST00000368648 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
EBF3-202ENST00000368648 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 SYCE3A1L190 88 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 SSFA2P28290 1259 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 CREBRFQ8IUR6 639 aa13.16□□□□□ -0.3
EBF3-202ENST00000368648 NAIPQ13075 1403 aa13.15□□□□□ -0.3
EBF3-202ENST00000368648 SUPT6HQ7KZ85 1726 aaKnown RBP13.15□□□□□ -0.3
EBF3-202ENST00000368648 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
EBF3-202ENST00000368648 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
EBF3-202ENST00000368648 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
EBF3-202ENST00000368648 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
EBF3-202ENST00000368648 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 FIBPO43427 364 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 MAP7D2Q96T17 732 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 CABP1Q9NZU7 370 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 CAMSAP2Q08AD1 1489 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms