RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 ABCC11Q96J66 1382 aa23.71■■□□□ 1.39
C1orf43-203ENST00000368516 ORAI2Q96SN7 254 aa23.71■■□□□ 1.39
C1orf43-203ENST00000368516 STK26Q9P289 416 aa23.71■■□□□ 1.39
C1orf43-203ENST00000368516 MYOM2P54296 1465 aa23.7■■□□□ 1.38
C1orf43-203ENST00000368516 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
C1orf43-203ENST00000368516 YTHDC2Q9H6S0 1430 aaKnown RBP23.68■■□□□ 1.38
C1orf43-203ENST00000368516 TMEM132EQ6IEE7 984 aa23.68■■□□□ 1.38
C1orf43-203ENST00000368516 SOS2Q07890 1332 aaPredicted RBP23.67■■□□□ 1.38
C1orf43-203ENST00000368516 WAPLQ7Z5K2 1190 aa23.66■■□□□ 1.38
C1orf43-203ENST00000368516 C14orf93Q9H972 538 aaKnown RBP23.65■■□□□ 1.38
C1orf43-203ENST00000368516 ESCO1Q5FWF5 840 aa23.64■■□□□ 1.37
C1orf43-203ENST00000368516 AFF2P51816 1311 aa23.63■■□□□ 1.37
C1orf43-203ENST00000368516 PLEKHH1Q9ULM0 1364 aa23.63■■□□□ 1.37
C1orf43-203ENST00000368516 NPHP3Q7Z494 1330 aa23.62■■□□□ 1.37
C1orf43-203ENST00000368516 FMN2Q9NZ56 1722 aa23.62■■□□□ 1.37
C1orf43-203ENST00000368516 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
C1orf43-203ENST00000368516 DHX57Q6P158 1386 aaKnown RBP23.62■■□□□ 1.37
C1orf43-203ENST00000368516 HRCP23327 699 aa23.61■■□□□ 1.37
C1orf43-203ENST00000368516 COL22A1Q8NFW1 1626 aaPredicted RBP23.6■■□□□ 1.37
C1orf43-203ENST00000368516 RXRBP28702 533 aa23.59■■□□□ 1.37
C1orf43-203ENST00000368516 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
C1orf43-203ENST00000368516 C8orf37Q96NL8 207 aa23.59■■□□□ 1.37
C1orf43-203ENST00000368516 PXDNQ92626 1479 aa23.59■■□□□ 1.37
C1orf43-203ENST00000368516 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
C1orf43-203ENST00000368516 CDK12Q9NYV4 1490 aaPredicted RBP23.57■■□□□ 1.36
C1orf43-203ENST00000368516 NUTM2FA1L443 756 aa23.56■■□□□ 1.36
C1orf43-203ENST00000368516 FOXO3O43524 673 aa23.55■■□□□ 1.36
C1orf43-203ENST00000368516 ADAMTS2O95450 1211 aa23.55■■□□□ 1.36
C1orf43-203ENST00000368516 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
C1orf43-203ENST00000368516 NGLY1Q96IV0 654 aa23.54■■□□□ 1.36
C1orf43-203ENST00000368516 ADGRB1O14514 1584 aa23.52■■□□□ 1.36
C1orf43-203ENST00000368516 XPCQ01831 940 aaPredicted RBP23.51■■□□□ 1.35
C1orf43-203ENST00000368516 STAC3Q96MF2 364 aa23.51■■□□□ 1.35
C1orf43-203ENST00000368516 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
C1orf43-203ENST00000368516 QTRT2Q9H974 415 aaKnown RBP23.51■■□□□ 1.35
C1orf43-203ENST00000368516 RGPD8O14715 1765 aaPredicted RBP23.5■■□□□ 1.35
C1orf43-203ENST00000368516 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
C1orf43-203ENST00000368516 DCAF11Q8TEB1 546 aa23.49■■□□□ 1.35
C1orf43-203ENST00000368516 MARF1Q9Y4F3 1742 aaKnown RBP23.49■■□□□ 1.35
C1orf43-203ENST00000368516 POGKQ9P215 609 aa23.48■■□□□ 1.35
C1orf43-203ENST00000368516 KDM2AQ9Y2K7 1162 aa23.48■■□□□ 1.35
C1orf43-203ENST00000368516 ADGRB2O60241 1585 aa23.48■■□□□ 1.35
C1orf43-203ENST00000368516 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
C1orf43-203ENST00000368516 USP21Q9UK80 565 aa23.46■■□□□ 1.35
C1orf43-203ENST00000368516 FNBP4Q8N3X1 1017 aaPredicted RBP23.45■■□□□ 1.34
C1orf43-203ENST00000368516 PHF8Q9UPP1 1060 aa23.45■■□□□ 1.34
C1orf43-203ENST00000368516 RGS12O14924 1447 aa23.44■■□□□ 1.34
C1orf43-203ENST00000368516 SPATA31A3Q5VYP0 1347 aa23.44■■□□□ 1.34
C1orf43-203ENST00000368516 ANKARQ7Z5J8 1434 aa23.43■■□□□ 1.34
C1orf43-203ENST00000368516 KRT28Q7Z3Y7 464 aa23.43■■□□□ 1.34
C1orf43-203ENST00000368516 UPF1Q92900 1129 aaKnown RBP eCLIP23.43■■□□□ 1.343e-6■□□□□ 9.5
C1orf43-203ENST00000368516 TRAK1Q9UPV9 953 aa23.43■■□□□ 1.34
C1orf43-203ENST00000368516 TRPC5Q9UL62 973 aaPredicted RBP23.42■■□□□ 1.34
C1orf43-203ENST00000368516 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
C1orf43-203ENST00000368516 PSME1Q06323 249 aa23.41■■□□□ 1.34
C1orf43-203ENST00000368516 EIF3AQ14152 1382 aaKnown RBP23.4■■□□□ 1.34
C1orf43-203ENST00000368516 ATRNO75882 1429 aa23.4■■□□□ 1.34
C1orf43-203ENST00000368516 TNS3Q68CZ2 1445 aa23.4■■□□□ 1.34
C1orf43-203ENST00000368516 SBNO1A3KN83 1393 aa23.38■■□□□ 1.33
C1orf43-203ENST00000368516 ARHGEF28Q8N1W1 1705 aaKnown RBP23.37■■□□□ 1.33
C1orf43-203ENST00000368516 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.36■■□□□ 1.33
C1orf43-203ENST00000368516 MINK1Q8N4C8 1332 aaPredicted RBP23.36■■□□□ 1.33
C1orf43-203ENST00000368516 HIRIP3Q9BW71 556 aaPredicted RBP23.36■■□□□ 1.33
C1orf43-203ENST00000368516 TULP4Q9NRJ4 1543 aa23.36■■□□□ 1.33
C1orf43-203ENST00000368516 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
C1orf43-203ENST00000368516 KIAA1210Q9ULL0 1709 aa23.35■■□□□ 1.33
C1orf43-203ENST00000368516 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
C1orf43-203ENST00000368516 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
C1orf43-203ENST00000368516 WASLO00401 505 aaPredicted RBP23.32■■□□□ 1.32
C1orf43-203ENST00000368516 HAP1P54257 671 aaPredicted RBP23.32■■□□□ 1.32
C1orf43-203ENST00000368516 ABCA3Q99758 1704 aa23.32■■□□□ 1.32
C1orf43-203ENST00000368516 SLIT2O94813 1529 aa23.31■■□□□ 1.32
C1orf43-203ENST00000368516 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
C1orf43-203ENST00000368516 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
C1orf43-203ENST00000368516 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
C1orf43-203ENST00000368516 GPRASP1Q5JY77 1395 aa23.29■■□□□ 1.32
C1orf43-203ENST00000368516 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
C1orf43-203ENST00000368516 LMOD2Q6P5Q4 547 aa23.29■■□□□ 1.32
C1orf43-203ENST00000368516 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
C1orf43-203ENST00000368516 GJD4Q96KN9 370 aaPredicted RBP23.27■■□□□ 1.32
C1orf43-203ENST00000368516 ALS2Q96Q42 1657 aa23.27■■□□□ 1.32
C1orf43-203ENST00000368516 NWD2Q9ULI1 1742 aa23.27■■□□□ 1.32
C1orf43-203ENST00000368516 PLCH1Q4KWH8 1693 aa23.26■■□□□ 1.31
C1orf43-203ENST00000368516 CABLES1Q8TDN4 633 aa23.26■■□□□ 1.31
C1orf43-203ENST00000368516 ATP7BP35670 1465 aa23.24■■□□□ 1.31
C1orf43-203ENST00000368516 PLEKHG5O94827 1062 aa23.24■■□□□ 1.31
C1orf43-203ENST00000368516 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
C1orf43-203ENST00000368516 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
C1orf43-203ENST00000368516 GLI3P10071 1580 aa23.23■■□□□ 1.31
C1orf43-203ENST00000368516 EP400Q96L91 3159 aa23.22■■□□□ 1.31
C1orf43-203ENST00000368516 NUDT16Q96DE0 195 aaKnown RBP23.21■■□□□ 1.31
C1orf43-203ENST00000368516 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
C1orf43-203ENST00000368516 VPS72Q15906 364 aa23.18■■□□□ 1.3
C1orf43-203ENST00000368516 NBPF1Q3BBV0 1214 aa23.18■■□□□ 1.3
C1orf43-203ENST00000368516 CDK19Q9BWU1 502 aa23.18■■□□□ 1.3
C1orf43-203ENST00000368516 CRYBG1Q9Y4K1 1723 aa23.17■■□□□ 1.3
C1orf43-203ENST00000368516 PAK3O75914 559 aaPredicted RBP23.16■■□□□ 1.3
C1orf43-203ENST00000368516 COL14A1Q05707 1796 aaKnown RBP23.16■■□□□ 1.3
C1orf43-203ENST00000368516 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
C1orf43-203ENST00000368516 NRAPQ86VF7 1730 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms