RNA–Protein interactions for RNA: ENST00000368206.5

HDGF-202, Transcript of heparin binding growth factor, humanhuman

TSL 5 BASIC

Gene HDGF, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-202ENST00000368206 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
HDGF-202ENST00000368206 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
HDGF-202ENST00000368206 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
HDGF-202ENST00000368206 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
HDGF-202ENST00000368206 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
HDGF-202ENST00000368206 MYOM2P54296 1465 aa19.16■□□□□ 0.66
HDGF-202ENST00000368206 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
HDGF-202ENST00000368206 POGKQ9P215 609 aa19.15■□□□□ 0.66
HDGF-202ENST00000368206 TECPR2O15040 1411 aa19.15■□□□□ 0.66
HDGF-202ENST00000368206 ZNF772Q68DY9 489 aaPredicted RBP19.14■□□□□ 0.65
HDGF-202ENST00000368206 POTEAQ6S8J7 498 aa19.14■□□□□ 0.65
HDGF-202ENST00000368206 NRXN1Q9ULB1 1477 aa19.12■□□□□ 0.65
HDGF-202ENST00000368206 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
HDGF-202ENST00000368206 PRAM1Q96QH2 718 aa19.12■□□□□ 0.65
HDGF-202ENST00000368206 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
HDGF-202ENST00000368206 SAFB2Q14151 953 aaKnown RBP eCLIP19.11■□□□□ 0.65
HDGF-202ENST00000368206 SOS2Q07890 1332 aaPredicted RBP19.1■□□□□ 0.65
HDGF-202ENST00000368206 FOXO3O43524 673 aa19.1■□□□□ 0.65
HDGF-202ENST00000368206 SHPRHQ149N8 1683 aa19.09■□□□□ 0.65
HDGF-202ENST00000368206 TRAK1Q9UPV9 953 aa19.09■□□□□ 0.65
HDGF-202ENST00000368206 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
HDGF-202ENST00000368206 LAMC1P11047 1609 aa19.08■□□□□ 0.65
HDGF-202ENST00000368206 LRP6O75581 1613 aa19.07■□□□□ 0.64
HDGF-202ENST00000368206 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
HDGF-202ENST00000368206 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
HDGF-202ENST00000368206 KNDC1Q76NI1 1749 aa19.06■□□□□ 0.64
HDGF-202ENST00000368206 ADAMTS2O95450 1211 aa19.05■□□□□ 0.64
HDGF-202ENST00000368206 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
HDGF-202ENST00000368206 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
HDGF-202ENST00000368206 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
HDGF-202ENST00000368206 RXRBP28702 533 aa19.03■□□□□ 0.64
HDGF-202ENST00000368206 AFF2P51816 1311 aa19.02■□□□□ 0.64
HDGF-202ENST00000368206 PSME1Q06323 249 aa19.02■□□□□ 0.64
HDGF-202ENST00000368206 KRT28Q7Z3Y7 464 aa19.02■□□□□ 0.64
HDGF-202ENST00000368206 PHF8Q9UPP1 1060 aa19.02■□□□□ 0.64
HDGF-202ENST00000368206 HIRIP3Q9BW71 556 aaPredicted RBP19.01■□□□□ 0.63
HDGF-202ENST00000368206 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
HDGF-202ENST00000368206 DLC1Q96QB1 1528 aa19■□□□□ 0.63
HDGF-202ENST00000368206 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
HDGF-202ENST00000368206 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
HDGF-202ENST00000368206 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
HDGF-202ENST00000368206 EIF3AQ14152 1382 aaKnown RBP18.96■□□□□ 0.63
HDGF-202ENST00000368206 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
HDGF-202ENST00000368206 HAP1P54257 671 aaPredicted RBP18.96■□□□□ 0.63
HDGF-202ENST00000368206 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
HDGF-202ENST00000368206 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
HDGF-202ENST00000368206 PMFBP1Q8TBY8 1022 aa18.96■□□□□ 0.63
HDGF-202ENST00000368206 USP21Q9UK80 565 aa18.95■□□□□ 0.62
HDGF-202ENST00000368206 PXDNQ92626 1479 aa18.95■□□□□ 0.62
HDGF-202ENST00000368206 SPATA31A3Q5VYP0 1347 aa18.95■□□□□ 0.62
HDGF-202ENST00000368206 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
HDGF-202ENST00000368206 ANKARQ7Z5J8 1434 aa18.93■□□□□ 0.62
HDGF-202ENST00000368206 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
HDGF-202ENST00000368206 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
HDGF-202ENST00000368206 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
HDGF-202ENST00000368206 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
HDGF-202ENST00000368206 FNBP4Q8N3X1 1017 aaPredicted RBP18.91■□□□□ 0.62
HDGF-202ENST00000368206 NGDNQ8NEJ9 315 aaKnown RBP18.91■□□□□ 0.62
HDGF-202ENST00000368206 TRPC5Q9UL62 973 aaPredicted RBP18.91■□□□□ 0.62
HDGF-202ENST00000368206 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
HDGF-202ENST00000368206 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
HDGF-202ENST00000368206 RGPD8O14715 1765 aaPredicted RBP18.89■□□□□ 0.61
HDGF-202ENST00000368206 TRIM26Q12899 539 aaPredicted RBP18.89■□□□□ 0.61
HDGF-202ENST00000368206 CDK19Q9BWU1 502 aa18.89■□□□□ 0.61
HDGF-202ENST00000368206 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
HDGF-202ENST00000368206 SBNO1A3KN83 1393 aa18.88■□□□□ 0.61
HDGF-202ENST00000368206 COL22A1Q8NFW1 1626 aaPredicted RBP18.87■□□□□ 0.61
HDGF-202ENST00000368206 ADGRB2O60241 1585 aa18.86■□□□□ 0.61
HDGF-202ENST00000368206 ARHGEF10O15013 1369 aa18.86■□□□□ 0.61
HDGF-202ENST00000368206 PRR36Q9H6K5 1346 aa18.86■□□□□ 0.61
HDGF-202ENST00000368206 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
HDGF-202ENST00000368206 TNS3Q68CZ2 1445 aa18.85■□□□□ 0.61
HDGF-202ENST00000368206 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
HDGF-202ENST00000368206 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
HDGF-202ENST00000368206 KIAA1210Q9ULL0 1709 aa18.84■□□□□ 0.61
HDGF-202ENST00000368206 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
HDGF-202ENST00000368206 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
HDGF-202ENST00000368206 CCDC61Q9Y6R9 512 aa18.83■□□□□ 0.6
HDGF-202ENST00000368206 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
HDGF-202ENST00000368206 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
HDGF-202ENST00000368206 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
HDGF-202ENST00000368206 USP32Q8NFA0 1604 aa18.81■□□□□ 0.6
HDGF-202ENST00000368206 UPF1Q92900 1129 aaKnown RBP eCLIP18.8■□□□□ 0.64e-35■■■■■ 59.9
HDGF-202ENST00000368206 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
HDGF-202ENST00000368206 ROCK2O75116 1388 aaKnown RBP18.78■□□□□ 0.6
HDGF-202ENST00000368206 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.6
HDGF-202ENST00000368206 ATRNO75882 1429 aa18.77■□□□□ 0.6
HDGF-202ENST00000368206 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
HDGF-202ENST00000368206 NBPF8Q3BBV2 869 aa18.77■□□□□ 0.6
HDGF-202ENST00000368206 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
HDGF-202ENST00000368206 CCDC9Q9Y3X0 531 aaKnown RBP18.77■□□□□ 0.6
HDGF-202ENST00000368206 ACEP12821 1306 aa18.76■□□□□ 0.59
HDGF-202ENST00000368206 RGS12O14924 1447 aa18.75■□□□□ 0.59
HDGF-202ENST00000368206 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
HDGF-202ENST00000368206 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
HDGF-202ENST00000368206 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
HDGF-202ENST00000368206 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
HDGF-202ENST00000368206 ATP7BP35670 1465 aa18.74■□□□□ 0.59
HDGF-202ENST00000368206 ITSN1Q15811 1721 aa18.72■□□□□ 0.59
HDGF-202ENST00000368206 VPS72Q15906 364 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms