RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
NECTIN4-201ENST00000368012 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
NECTIN4-201ENST00000368012 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
NECTIN4-201ENST00000368012 MINK1Q8N4C8 1332 aaPredicted RBP13.91□□□□□ -0.18
NECTIN4-201ENST00000368012 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
NECTIN4-201ENST00000368012 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
NECTIN4-201ENST00000368012 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
NECTIN4-201ENST00000368012 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
NECTIN4-201ENST00000368012 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
NECTIN4-201ENST00000368012 TRAK2O60296 914 aa13.89□□□□□ -0.19
NECTIN4-201ENST00000368012 RIPK4P57078 832 aa13.89□□□□□ -0.19
NECTIN4-201ENST00000368012 HMOX1P09601 288 aa13.89□□□□□ -0.19
NECTIN4-201ENST00000368012 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
NECTIN4-201ENST00000368012 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
NECTIN4-201ENST00000368012 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
NECTIN4-201ENST00000368012 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
NECTIN4-201ENST00000368012 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
NECTIN4-201ENST00000368012 FOXD4L6Q3SYB3 417 aaPredicted RBP13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 FOXD4L3Q6VB84 417 aaPredicted RBP13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 MCM4P33991 863 aa13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 SCAF11Q99590 1463 aaKnown RBP13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 TRMT2AQ8IZ69 625 aaKnown RBP13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
NECTIN4-201ENST00000368012 NSD3Q9BZ95 1437 aa13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 TTC37Q6PGP7 1564 aa13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 CDC42BPBQ9Y5S2 1711 aa13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 CHMP5Q9NZZ3 219 aa13.85□□□□□ -0.19
NECTIN4-201ENST00000368012 TMEM57Q8N5G2 664 aa13.84□□□□□ -0.19
NECTIN4-201ENST00000368012 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
NECTIN4-201ENST00000368012 USP19O94966 1318 aa13.84□□□□□ -0.19
NECTIN4-201ENST00000368012 INSRP06213 1382 aa13.84□□□□□ -0.19
NECTIN4-201ENST00000368012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.83□□□□□ -0.2
NECTIN4-201ENST00000368012 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
NECTIN4-201ENST00000368012 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
NECTIN4-201ENST00000368012 GLIPR1L2Q4G1C9 344 aa13.83□□□□□ -0.2
NECTIN4-201ENST00000368012 TBC1D32Q96NH3 1257 aa13.83□□□□□ -0.2
NECTIN4-201ENST00000368012 TRIM27P14373 513 aa13.82□□□□□ -0.2
NECTIN4-201ENST00000368012 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
NECTIN4-201ENST00000368012 MLECQ14165 292 aa13.82□□□□□ -0.2
NECTIN4-201ENST00000368012 IPO8O15397 1037 aaKnown RBP13.81□□□□□ -0.2
NECTIN4-201ENST00000368012 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
NECTIN4-201ENST00000368012 ZMYND15Q9H091 742 aa13.81□□□□□ -0.2
NECTIN4-201ENST00000368012 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
NECTIN4-201ENST00000368012 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
NECTIN4-201ENST00000368012 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
NECTIN4-201ENST00000368012 PREX2Q70Z35 1606 aa13.8□□□□□ -0.2
NECTIN4-201ENST00000368012 GOLGA6L22H0YM25 854 aa13.8□□□□□ -0.2
NECTIN4-201ENST00000368012 ATF7IPQ6VMQ6 1270 aa13.79□□□□□ -0.2
NECTIN4-201ENST00000368012 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
NECTIN4-201ENST00000368012 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
NECTIN4-201ENST00000368012 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
NECTIN4-201ENST00000368012 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
NECTIN4-201ENST00000368012 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
NECTIN4-201ENST00000368012 ATP10AO60312 1499 aa13.77□□□□□ -0.2
NECTIN4-201ENST00000368012 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.2
NECTIN4-201ENST00000368012 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
NECTIN4-201ENST00000368012 PLCH2O75038 1416 aa13.77□□□□□ -0.21
NECTIN4-201ENST00000368012 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
NECTIN4-201ENST00000368012 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
NECTIN4-201ENST00000368012 WDR63Q8IWG1 891 aa13.77□□□□□ -0.21
NECTIN4-201ENST00000368012 MPNDQ8N594 471 aa13.77□□□□□ -0.21
NECTIN4-201ENST00000368012 UGGT1Q9NYU2 1555 aa13.76□□□□□ -0.21
NECTIN4-201ENST00000368012 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
NECTIN4-201ENST00000368012 UNC13BO14795 1591 aa13.76□□□□□ -0.21
NECTIN4-201ENST00000368012 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
NECTIN4-201ENST00000368012 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
NECTIN4-201ENST00000368012 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
NECTIN4-201ENST00000368012 DCTN1Q14203 1278 aa13.75□□□□□ -0.21
NECTIN4-201ENST00000368012 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
NECTIN4-201ENST00000368012 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
NECTIN4-201ENST00000368012 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
NECTIN4-201ENST00000368012 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 ERVK-7P63135 1459 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 TNPO1Q92973 898 aaKnown RBP13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
NECTIN4-201ENST00000368012 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
NECTIN4-201ENST00000368012 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
NECTIN4-201ENST00000368012 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
NECTIN4-201ENST00000368012 MRE11P49959 708 aa13.72□□□□□ -0.21
NECTIN4-201ENST00000368012 NOS1P29475 1434 aa13.72□□□□□ -0.21
NECTIN4-201ENST00000368012 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
NECTIN4-201ENST00000368012 MADDQ8WXG6 1647 aa13.71□□□□□ -0.21
NECTIN4-201ENST00000368012 SYNMO15061 1565 aa13.71□□□□□ -0.21
NECTIN4-201ENST00000368012 PTMAP06454 111 aaKnown RBP13.71□□□□□ -0.21
NECTIN4-201ENST00000368012 MSNP26038 577 aaKnown RBP13.71□□□□□ -0.21
NECTIN4-201ENST00000368012 SSFA2P28290 1259 aa13.71□□□□□ -0.21
NECTIN4-201ENST00000368012 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.22
NECTIN4-201ENST00000368012 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.22
NECTIN4-201ENST00000368012 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
NECTIN4-201ENST00000368012 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
NECTIN4-201ENST00000368012 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms