RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
VTA1-201ENST00000367621 KIF1BO60333 1816 aa13.39□□□□□ -0.27
VTA1-201ENST00000367621 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
VTA1-201ENST00000367621 DIEXFQ68CQ4 756 aaKnown RBP13.38□□□□□ -0.27
VTA1-201ENST00000367621 C14orf93Q9H972 538 aaKnown RBP13.38□□□□□ -0.27
VTA1-201ENST00000367621 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
VTA1-201ENST00000367621 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
VTA1-201ENST00000367621 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
VTA1-201ENST00000367621 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
VTA1-201ENST00000367621 POTEGQ6S5H5 508 aa13.37□□□□□ -0.27
VTA1-201ENST00000367621 MIER1Q8N108 512 aa13.37□□□□□ -0.27
VTA1-201ENST00000367621 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
VTA1-201ENST00000367621 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
VTA1-201ENST00000367621 BMP2KQ9NSY1 1161 aaPredicted RBP13.35□□□□□ -0.27
VTA1-201ENST00000367621 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
VTA1-201ENST00000367621 LAMC1P11047 1609 aa13.35□□□□□ -0.27
VTA1-201ENST00000367621 PPLO60437 1756 aa13.35□□□□□ -0.27
VTA1-201ENST00000367621 C3P01024 1663 aa13.34□□□□□ -0.27
VTA1-201ENST00000367621 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
VTA1-201ENST00000367621 TIE1P35590 1138 aa13.34□□□□□ -0.27
VTA1-201ENST00000367621 FER1L4A9Z1Z3 1794 aa13.34□□□□□ -0.27
VTA1-201ENST00000367621 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
VTA1-201ENST00000367621 TESK2Q96S53 571 aa13.33□□□□□ -0.28
VTA1-201ENST00000367621 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.28
VTA1-201ENST00000367621 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
VTA1-201ENST00000367621 MAP3K13O43283 966 aa13.32□□□□□ -0.28
VTA1-201ENST00000367621 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
VTA1-201ENST00000367621 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
VTA1-201ENST00000367621 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
VTA1-201ENST00000367621 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
VTA1-201ENST00000367621 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
VTA1-201ENST00000367621 POTEFA5A3E0 1075 aa13.3□□□□□ -0.28
VTA1-201ENST00000367621 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
VTA1-201ENST00000367621 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
VTA1-201ENST00000367621 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
VTA1-201ENST00000367621 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
VTA1-201ENST00000367621 LTKP29376 864 aa13.29□□□□□ -0.28
VTA1-201ENST00000367621 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
VTA1-201ENST00000367621 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.29□□□□□ -0.28
VTA1-201ENST00000367621 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
VTA1-201ENST00000367621 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
VTA1-201ENST00000367621 MYO5BQ9ULV0 1848 aa13.28□□□□□ -0.28
VTA1-201ENST00000367621 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
VTA1-201ENST00000367621 PTPRMP28827 1452 aa13.28□□□□□ -0.28
VTA1-201ENST00000367621 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
VTA1-201ENST00000367621 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
VTA1-201ENST00000367621 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.29
VTA1-201ENST00000367621 SLIT1O75093 1534 aa13.26□□□□□ -0.29
VTA1-201ENST00000367621 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
VTA1-201ENST00000367621 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
VTA1-201ENST00000367621 THEMISQ8N1K5 641 aaPredicted RBP13.25□□□□□ -0.29
VTA1-201ENST00000367621 ALKQ9UM73 1620 aa13.24□□□□□ -0.29
VTA1-201ENST00000367621 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
VTA1-201ENST00000367621 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
VTA1-201ENST00000367621 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
VTA1-201ENST00000367621 LCE2DQ5TA82 110 aaPredicted RBP13.23□□□□□ -0.29
VTA1-201ENST00000367621 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
VTA1-201ENST00000367621 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
VTA1-201ENST00000367621 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
VTA1-201ENST00000367621 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
VTA1-201ENST00000367621 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
VTA1-201ENST00000367621 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
VTA1-201ENST00000367621 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
VTA1-201ENST00000367621 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
VTA1-201ENST00000367621 CEP170BQ9Y4F5 1589 aaPredicted RBP13.22□□□□□ -0.29
VTA1-201ENST00000367621 MED14O60244 1454 aa13.22□□□□□ -0.29
VTA1-201ENST00000367621 METP08581 1390 aa13.21□□□□□ -0.29
VTA1-201ENST00000367621 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
VTA1-201ENST00000367621 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
VTA1-201ENST00000367621 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
VTA1-201ENST00000367621 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
VTA1-201ENST00000367621 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
VTA1-201ENST00000367621 NUBP1P53384 320 aa13.19□□□□□ -0.3
VTA1-201ENST00000367621 TMF1P82094 1093 aa13.19□□□□□ -0.3
VTA1-201ENST00000367621 IER5LQ5T953 404 aa13.19□□□□□ -0.3
VTA1-201ENST00000367621 EID1Q9Y6B2 187 aa13.19□□□□□ -0.3
VTA1-201ENST00000367621 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
VTA1-201ENST00000367621 STK26Q9P289 416 aa13.18□□□□□ -0.3
VTA1-201ENST00000367621 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
VTA1-201ENST00000367621 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
VTA1-201ENST00000367621 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
VTA1-201ENST00000367621 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
VTA1-201ENST00000367621 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
VTA1-201ENST00000367621 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
VTA1-201ENST00000367621 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
VTA1-201ENST00000367621 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
VTA1-201ENST00000367621 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
VTA1-201ENST00000367621 POLR3GLQ9BT43 218 aa13.15□□□□□ -0.3
VTA1-201ENST00000367621 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
VTA1-201ENST00000367621 TECPR2O15040 1411 aa13.14□□□□□ -0.31
VTA1-201ENST00000367621 PTPRUQ92729 1446 aa13.14□□□□□ -0.31
VTA1-201ENST00000367621 SEC24BO95487 1268 aa13.14□□□□□ -0.31
VTA1-201ENST00000367621 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
VTA1-201ENST00000367621 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
VTA1-201ENST00000367621 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
VTA1-201ENST00000367621 BCANQ96GW7 911 aa13.13□□□□□ -0.31
VTA1-201ENST00000367621 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
VTA1-201ENST00000367621 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
VTA1-201ENST00000367621 WAPLQ7Z5K2 1190 aa13.12□□□□□ -0.31
VTA1-201ENST00000367621 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms