RNA–Protein interactions for RNA: ENST00000366960.7

RPS6KC1-202, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPS6KC1, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-202ENST00000366960 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
RPS6KC1-202ENST00000366960 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
RPS6KC1-202ENST00000366960 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.37
RPS6KC1-202ENST00000366960 TPM1P09493 284 aa17.33■□□□□ 0.37
RPS6KC1-202ENST00000366960 IFT57Q9NWB7 429 aa17.33■□□□□ 0.37
RPS6KC1-202ENST00000366960 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
RPS6KC1-202ENST00000366960 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
RPS6KC1-202ENST00000366960 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
RPS6KC1-202ENST00000366960 ROCK1Q13464 1354 aa17.33■□□□□ 0.36
RPS6KC1-202ENST00000366960 MRE11P49959 708 aa17.33■□□□□ 0.36
RPS6KC1-202ENST00000366960 CHMP4CQ96CF2 233 aa17.33■□□□□ 0.36
RPS6KC1-202ENST00000366960 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
RPS6KC1-202ENST00000366960 TRDNQ13061 729 aa17.32■□□□□ 0.36
RPS6KC1-202ENST00000366960 PCMTD1Q96MG8 357 aaPredicted RBP17.32■□□□□ 0.36
RPS6KC1-202ENST00000366960 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
RPS6KC1-202ENST00000366960 NEK4P51957 841 aa17.32■□□□□ 0.36
RPS6KC1-202ENST00000366960 UBTFL1P0CB47 393 aaPredicted RBP17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 KDM4AO75164 1064 aa17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 NFXL1Q6ZNB6 911 aa17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
RPS6KC1-202ENST00000366960 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
RPS6KC1-202ENST00000366960 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
RPS6KC1-202ENST00000366960 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
RPS6KC1-202ENST00000366960 ERC2O15083 957 aa17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 RIC3Q7Z5B4 369 aa17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
RPS6KC1-202ENST00000366960 MPNDQ8N594 471 aa17.28■□□□□ 0.36
RPS6KC1-202ENST00000366960 DHX16O60231 1041 aaKnown RBP17.28■□□□□ 0.36
RPS6KC1-202ENST00000366960 MIA2Q96PC5 1412 aa17.28■□□□□ 0.36
RPS6KC1-202ENST00000366960 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
RPS6KC1-202ENST00000366960 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
RPS6KC1-202ENST00000366960 NLRP6P59044 892 aa17.27■□□□□ 0.36
RPS6KC1-202ENST00000366960 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-202ENST00000366960 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-202ENST00000366960 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
RPS6KC1-202ENST00000366960 AAMPQ13685 434 aa17.26■□□□□ 0.35
RPS6KC1-202ENST00000366960 VPS37DQ86XT2 251 aa17.26■□□□□ 0.35
RPS6KC1-202ENST00000366960 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
RPS6KC1-202ENST00000366960 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
RPS6KC1-202ENST00000366960 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
RPS6KC1-202ENST00000366960 TPM2P07951 284 aa17.25■□□□□ 0.35
RPS6KC1-202ENST00000366960 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
RPS6KC1-202ENST00000366960 RALYLQ86SE5 291 aaKnown RBP17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 FIBPO43427 364 aa17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 GPS2Q13227 327 aa17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 PRM3Q9NNZ6 103 aa17.24■□□□□ 0.35
RPS6KC1-202ENST00000366960 CFTRP13569 1480 aa17.23■□□□□ 0.35
RPS6KC1-202ENST00000366960 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
RPS6KC1-202ENST00000366960 MSH5O43196 834 aa17.23■□□□□ 0.35
RPS6KC1-202ENST00000366960 ANKRD20A12PQ8NF67 263 aa17.23■□□□□ 0.35
RPS6KC1-202ENST00000366960 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
RPS6KC1-202ENST00000366960 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
RPS6KC1-202ENST00000366960 FYB1O15117 783 aa17.22■□□□□ 0.35
RPS6KC1-202ENST00000366960 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
RPS6KC1-202ENST00000366960 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.352e-14■■■□□ 18.8
RPS6KC1-202ENST00000366960 CCDC70Q6NSX1 233 aa17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 GNAI3P08754 354 aa17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 MTMR7Q9Y216 660 aa17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
RPS6KC1-202ENST00000366960 ERICH2A1L162 156 aa17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 SAFBQ15424 915 aaKnown RBP eCLIP17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 HOOK1Q9UJC3 728 aaKnown RBP17.2■□□□□ 0.34
RPS6KC1-202ENST00000366960 PDILTQ8N807 584 aa17.19■□□□□ 0.34
RPS6KC1-202ENST00000366960 RBM10P98175 930 aaKnown RBP17.19■□□□□ 0.34
RPS6KC1-202ENST00000366960 CASKIN1Q8WXD9 1431 aa17.19■□□□□ 0.34
RPS6KC1-202ENST00000366960 CUX1P39880 1505 aa17.18■□□□□ 0.34
RPS6KC1-202ENST00000366960 RABEP1Q15276 862 aa17.18■□□□□ 0.34
RPS6KC1-202ENST00000366960 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
RPS6KC1-202ENST00000366960 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
RPS6KC1-202ENST00000366960 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
RPS6KC1-202ENST00000366960 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
RPS6KC1-202ENST00000366960 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 MBD3O95983 291 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
RPS6KC1-202ENST00000366960 FYCO1Q9BQS8 1478 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms