RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KIAA1210Q9ULL0 1709 aa19.44■□□□□ 0.7
PRKN-204ENST00000366896 TMF1P82094 1093 aa19.44■□□□□ 0.7
PRKN-204ENST00000366896 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
PRKN-204ENST00000366896 SLIT1O75093 1534 aa19.43■□□□□ 0.7
PRKN-204ENST00000366896 ARHGAP23Q9P227 1491 aa19.43■□□□□ 0.7
PRKN-204ENST00000366896 THEMISQ8N1K5 641 aaPredicted RBP19.43■□□□□ 0.7
PRKN-204ENST00000366896 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.41■□□□□ 0.7
PRKN-204ENST00000366896 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
PRKN-204ENST00000366896 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
PRKN-204ENST00000366896 HDGFP51858 240 aaKnown RBP19.39■□□□□ 0.69
PRKN-204ENST00000366896 C14orf93Q9H972 538 aaKnown RBP19.38■□□□□ 0.69
PRKN-204ENST00000366896 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
PRKN-204ENST00000366896 LTKP29376 864 aa19.37■□□□□ 0.69
PRKN-204ENST00000366896 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
PRKN-204ENST00000366896 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
PRKN-204ENST00000366896 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
PRKN-204ENST00000366896 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
PRKN-204ENST00000366896 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
PRKN-204ENST00000366896 PDE4AP27815 886 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 IL27Q8NEV9 243 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
PRKN-204ENST00000366896 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 PLIN1O60240 522 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 MS4A1P11836 297 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 ADGRB1O14514 1584 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
PRKN-204ENST00000366896 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
PRKN-204ENST00000366896 CDCA8Q53HL2 280 aa19.33■□□□□ 0.69
PRKN-204ENST00000366896 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.69
PRKN-204ENST00000366896 BACH2Q9BYV9 841 aa19.33■□□□□ 0.68
PRKN-204ENST00000366896 PLEKHG1Q9ULL1 1385 aa19.33■□□□□ 0.68
PRKN-204ENST00000366896 SETD1AO15047 1707 aaKnown RBP19.33■□□□□ 0.68
PRKN-204ENST00000366896 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
PRKN-204ENST00000366896 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
PRKN-204ENST00000366896 NEFMP07197 916 aa19.31■□□□□ 0.68
PRKN-204ENST00000366896 ADAMTS8Q9UP79 889 aa19.29■□□□□ 0.68
PRKN-204ENST00000366896 TMEM132EQ6IEE7 984 aa19.29■□□□□ 0.68
PRKN-204ENST00000366896 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
PRKN-204ENST00000366896 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
PRKN-204ENST00000366896 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
PRKN-204ENST00000366896 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
PRKN-204ENST00000366896 LMTK3Q96Q04 1460 aa19.28■□□□□ 0.68
PRKN-204ENST00000366896 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
PRKN-204ENST00000366896 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
PRKN-204ENST00000366896 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
PRKN-204ENST00000366896 MED14O60244 1454 aa19.26■□□□□ 0.67
PRKN-204ENST00000366896 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
PRKN-204ENST00000366896 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
PRKN-204ENST00000366896 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
PRKN-204ENST00000366896 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
PRKN-204ENST00000366896 SKAP1Q86WV1 359 aa19.24■□□□□ 0.67
PRKN-204ENST00000366896 MYOM1P52179 1685 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 METP08581 1390 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 YTHDC2Q9H6S0 1430 aaKnown RBP19.23■□□□□ 0.67
PRKN-204ENST00000366896 DIP2AQ14689 1571 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 C20orf194Q5TEA3 1177 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
PRKN-204ENST00000366896 HSPA2P54652 639 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
PRKN-204ENST00000366896 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.673e-8■■■■■ 70.1
PRKN-204ENST00000366896 TRAK1Q9UPV9 953 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
PRKN-204ENST00000366896 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
PRKN-204ENST00000366896 TBX22Q9Y458 520 aa19.2■□□□□ 0.66
PRKN-204ENST00000366896 NPHP4O75161 1426 aaPredicted RBP19.2■□□□□ 0.66
PRKN-204ENST00000366896 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
PRKN-204ENST00000366896 STK26Q9P289 416 aa19.19■□□□□ 0.66
PRKN-204ENST00000366896 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
PRKN-204ENST00000366896 KNDC1Q76NI1 1749 aa19.17■□□□□ 0.66
PRKN-204ENST00000366896 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
PRKN-204ENST00000366896 ABCC11Q96J66 1382 aa19.16■□□□□ 0.66
PRKN-204ENST00000366896 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
PRKN-204ENST00000366896 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
PRKN-204ENST00000366896 TECPR2O15040 1411 aa19.15■□□□□ 0.66
PRKN-204ENST00000366896 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.66
PRKN-204ENST00000366896 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 SBNO2Q9Y2G9 1366 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 STRCQ7RTU9 1775 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 CCDC146Q8IYE0 955 aa19.14■□□□□ 0.65
PRKN-204ENST00000366896 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
PRKN-204ENST00000366896 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
PRKN-204ENST00000366896 CPS1P31327 1500 aa19.13■□□□□ 0.65
PRKN-204ENST00000366896 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
PRKN-204ENST00000366896 GSE1Q14687 1217 aa19.12■□□□□ 0.65
PRKN-204ENST00000366896 XRN1Q8IZH2 1706 aaKnown RBP19.11■□□□□ 0.65
PRKN-204ENST00000366896 SLFN5Q08AF3 891 aa19.11■□□□□ 0.65
PRKN-204ENST00000366896 CENPQQ7L2Z9 268 aaPredicted RBP19.11■□□□□ 0.65
PRKN-204ENST00000366896 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
PRKN-204ENST00000366896 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
PRKN-204ENST00000366896 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
PRKN-204ENST00000366896 SIRT1Q96EB6 747 aa19.09■□□□□ 0.65
PRKN-204ENST00000366896 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
PRKN-204ENST00000366896 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
PRKN-204ENST00000366896 NFKBIBQ15653 356 aa19.08■□□□□ 0.65
PRKN-204ENST00000366896 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.65
PRKN-204ENST00000366896 POGKQ9P215 609 aa19.08■□□□□ 0.65
PRKN-204ENST00000366896 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms