RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 CDC42BPGQ6DT37 1551 aa21.91■■□□□ 1.1
CNIH4-204ENST00000366860 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.9■■□□□ 1.1
CNIH4-204ENST00000366860 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.09
CNIH4-204ENST00000366860 PLEKHH1Q9ULM0 1364 aa21.88■■□□□ 1.09
CNIH4-204ENST00000366860 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
CNIH4-204ENST00000366860 TULP4Q9NRJ4 1543 aa21.88■■□□□ 1.09
CNIH4-204ENST00000366860 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
CNIH4-204ENST00000366860 TESK2Q96S53 571 aa21.87■■□□□ 1.09
CNIH4-204ENST00000366860 ZNF335Q9H4Z2 1342 aaPredicted RBP21.86■■□□□ 1.09
CNIH4-204ENST00000366860 XIRP1Q702N8 1843 aaKnown RBP21.86■■□□□ 1.09
CNIH4-204ENST00000366860 TMF1P82094 1093 aa21.86■■□□□ 1.09
CNIH4-204ENST00000366860 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
CNIH4-204ENST00000366860 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
CNIH4-204ENST00000366860 WAPLQ7Z5K2 1190 aa21.84■■□□□ 1.09
CNIH4-204ENST00000366860 LRRC7Q96NW7 1537 aa21.84■■□□□ 1.09
CNIH4-204ENST00000366860 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.09
CNIH4-204ENST00000366860 EVC2Q86UK5 1308 aa21.83■■□□□ 1.09
CNIH4-204ENST00000366860 DCCP43146 1447 aa21.83■■□□□ 1.09
CNIH4-204ENST00000366860 LTBP4Q8N2S1 1624 aa21.83■■□□□ 1.08
CNIH4-204ENST00000366860 ITSN1Q15811 1721 aa21.83■■□□□ 1.08
CNIH4-204ENST00000366860 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
CNIH4-204ENST00000366860 HIRIP3Q9BW71 556 aaPredicted RBP21.82■■□□□ 1.08
CNIH4-204ENST00000366860 MINK1Q8N4C8 1332 aaPredicted RBP21.81■■□□□ 1.08
CNIH4-204ENST00000366860 PROSER2Q86WR7 435 aaPredicted RBP21.81■■□□□ 1.08
CNIH4-204ENST00000366860 TMEM94Q12767 1356 aa21.81■■□□□ 1.08
CNIH4-204ENST00000366860 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
CNIH4-204ENST00000366860 MYOM1P52179 1685 aa21.79■■□□□ 1.08
CNIH4-204ENST00000366860 TOPAZ1Q8N9V7 1692 aa21.79■■□□□ 1.08
CNIH4-204ENST00000366860 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
CNIH4-204ENST00000366860 ATAD2Q6PL18 1390 aa21.77■■□□□ 1.08
CNIH4-204ENST00000366860 NCBP3Q53F19 620 aaKnown RBP21.77■■□□□ 1.08
CNIH4-204ENST00000366860 C14orf37Q86TY3 774 aa21.77■■□□□ 1.08
CNIH4-204ENST00000366860 PUS7Q96PZ0 661 aaKnown RBP21.77■■□□□ 1.08
CNIH4-204ENST00000366860 MSH6P52701 1360 aa21.76■■□□□ 1.07
CNIH4-204ENST00000366860 ANKARQ7Z5J8 1434 aa21.76■■□□□ 1.07
CNIH4-204ENST00000366860 KIF7Q2M1P5 1343 aa21.76■■□□□ 1.07
CNIH4-204ENST00000366860 ATP7BP35670 1465 aa21.75■■□□□ 1.07
CNIH4-204ENST00000366860 NINLQ9Y2I6 1382 aa21.74■■□□□ 1.07
CNIH4-204ENST00000366860 WASLO00401 505 aaPredicted RBP21.74■■□□□ 1.07
CNIH4-204ENST00000366860 USP32Q8NFA0 1604 aa21.73■■□□□ 1.07
CNIH4-204ENST00000366860 IQSEC2Q5JU85 1478 aa21.72■■□□□ 1.07
CNIH4-204ENST00000366860 SRPK2P78362 688 aaKnown RBP21.72■■□□□ 1.07
CNIH4-204ENST00000366860 WASHC2AQ641Q2 1341 aa21.72■■□□□ 1.07
CNIH4-204ENST00000366860 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
CNIH4-204ENST00000366860 CDK19Q9BWU1 502 aa21.7■■□□□ 1.06
CNIH4-204ENST00000366860 KIF1AQ12756 1690 aa21.69■■□□□ 1.06
CNIH4-204ENST00000366860 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
CNIH4-204ENST00000366860 C11orf95C9JLR9 678 aaPredicted RBP21.67■■□□□ 1.06
CNIH4-204ENST00000366860 CADPS2Q86UW7 1296 aa21.67■■□□□ 1.06
CNIH4-204ENST00000366860 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
CNIH4-204ENST00000366860 ATF3P18847 181 aa21.66■■□□□ 1.06
CNIH4-204ENST00000366860 POLR3GLQ9BT43 218 aa21.66■■□□□ 1.06
CNIH4-204ENST00000366860 CABP2Q9NPB3 220 aa21.66■■□□□ 1.06
CNIH4-204ENST00000366860 AKAP12Q02952 1782 aa21.65■■□□□ 1.06
CNIH4-204ENST00000366860 MST1RQ04912 1400 aa21.64■■□□□ 1.06
CNIH4-204ENST00000366860 PPIP5K1Q6PFW1 1433 aa21.64■■□□□ 1.06
CNIH4-204ENST00000366860 MON2Q7Z3U7 1717 aa21.63■■□□□ 1.05
CNIH4-204ENST00000366860 NUDT16Q96DE0 195 aaKnown RBP21.62■■□□□ 1.05
CNIH4-204ENST00000366860 C1orf167Q5SNV9 1468 aa21.62■■□□□ 1.05
CNIH4-204ENST00000366860 PRR36Q9H6K5 1346 aa21.61■■□□□ 1.05
CNIH4-204ENST00000366860 MAPK8IP2Q13387 824 aaPredicted RBP21.61■■□□□ 1.05
CNIH4-204ENST00000366860 CCDC61Q9Y6R9 512 aa21.61■■□□□ 1.05
CNIH4-204ENST00000366860 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
CNIH4-204ENST00000366860 TMC1Q8TDI8 760 aa21.58■■□□□ 1.05
CNIH4-204ENST00000366860 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
CNIH4-204ENST00000366860 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
CNIH4-204ENST00000366860 TERF2IPQ9NYB0 399 aa21.56■■□□□ 1.04
CNIH4-204ENST00000366860 CD163L1Q9NR16 1453 aa21.56■■□□□ 1.04
CNIH4-204ENST00000366860 NUTM2FA1L443 756 aa21.55■■□□□ 1.04
CNIH4-204ENST00000366860 A0A1W2PP64 1363 aa21.54■■□□□ 1.04
CNIH4-204ENST00000366860 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
CNIH4-204ENST00000366860 HDGFL2Q7Z4V5 671 aaPredicted RBP21.54■■□□□ 1.04
CNIH4-204ENST00000366860 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
CNIH4-204ENST00000366860 KIF20BQ96Q89 1820 aa21.53■■□□□ 1.04
CNIH4-204ENST00000366860 PLEKHG3A1L390 1219 aa21.53■■□□□ 1.04
CNIH4-204ENST00000366860 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.04
CNIH4-204ENST00000366860 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.04
CNIH4-204ENST00000366860 CABP1Q9NZU7 370 aa21.52■■□□□ 1.04
CNIH4-204ENST00000366860 NHSL1Q5SYE7 1610 aa21.51■■□□□ 1.03
CNIH4-204ENST00000366860 ROBO1Q9Y6N7 1651 aa21.51■■□□□ 1.03
CNIH4-204ENST00000366860 PHF8Q9UPP1 1060 aa21.51■■□□□ 1.03
CNIH4-204ENST00000366860 USP6P35125 1406 aa21.5■■□□□ 1.03
CNIH4-204ENST00000366860 EDC4Q6P2E9 1401 aaKnown RBP21.5■■□□□ 1.03
CNIH4-204ENST00000366860 ESCO1Q5FWF5 840 aa21.5■■□□□ 1.03
CNIH4-204ENST00000366860 BRD4O60885 1362 aaPredicted RBP21.49■■□□□ 1.03
CNIH4-204ENST00000366860 ANKRD26Q9UPS8 1709 aa21.49■■□□□ 1.03
CNIH4-204ENST00000366860 NSD3Q9BZ95 1437 aa21.49■■□□□ 1.03
CNIH4-204ENST00000366860 SLAIN2Q9P270 581 aa21.49■■□□□ 1.03
CNIH4-204ENST00000366860 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
CNIH4-204ENST00000366860 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
CNIH4-204ENST00000366860 ZNF692Q9BU19 519 aaPredicted RBP21.48■■□□□ 1.03
CNIH4-204ENST00000366860 PANK3Q9H999 370 aa21.48■■□□□ 1.03
CNIH4-204ENST00000366860 ACEP12821 1306 aa21.48■■□□□ 1.03
CNIH4-204ENST00000366860 TOM1O60784 492 aa21.47■■□□□ 1.03
CNIH4-204ENST00000366860 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
CNIH4-204ENST00000366860 TRPM3Q9HCF6 1732 aaPredicted RBP21.46■■□□□ 1.03
CNIH4-204ENST00000366860 AHDC1Q5TGY3 1603 aaPredicted RBP21.45■■□□□ 1.02
CNIH4-204ENST00000366860 NPM3O75607 178 aaKnown RBP21.45■■□□□ 1.02
CNIH4-204ENST00000366860 PMFBP1Q8TBY8 1022 aa21.45■■□□□ 1.02
CNIH4-204ENST00000366860 ORAI2Q96SN7 254 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms