RNA–Protein interactions for RNA: ENST00000366686.1

CCSAP-202, Transcript of centriole, cilia and spindle associated protein, humanhuman

TSL 2 BASIC

Gene CCSAP, Length 4,399 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-202ENST00000366686 FAM69CQ0P6D2 419 aa3.82□□□□□ -1.8
CCSAP-202ENST00000366686 ANKRD26Q9UPS8 1709 aa3.82□□□□□ -1.8
CCSAP-202ENST00000366686 SRCAPQ6ZRS2 3230 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 ZC3H13Q5T200 1668 aaKnown RBP3.81□□□□□ -1.8
CCSAP-202ENST00000366686 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
CCSAP-202ENST00000366686 KDM5CP41229 1560 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 GJA5P36382 358 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 KIF12Q96FN5 646 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 PREX1Q8TCU6 1659 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 CFAP74Q9C0B2 1584 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 SSTR3P32745 418 aaPredicted RBP3.81□□□□□ -1.8
CCSAP-202ENST00000366686 PPP1R12CQ9BZL4 782 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 LIMD1Q9UGP4 676 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 FANCD2Q9BXW9 1451 aa3.81□□□□□ -1.8
CCSAP-202ENST00000366686 ANO8Q9HCE9 1232 aaPredicted RBP3.81□□□□□ -1.8
CCSAP-202ENST00000366686 POLA1P09884 1462 aaPredicted RBP3.8□□□□□ -1.8
CCSAP-202ENST00000366686 KANK4Q5T7N3 995 aaPredicted RBP3.8□□□□□ -1.8
CCSAP-202ENST00000366686 VRTNQ9H8Y1 702 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 ZMIZ1Q9ULJ6 1067 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 DHX37Q8IY37 1157 aaKnown RBP3.8□□□□□ -1.8
CCSAP-202ENST00000366686 CROCC2H7BZ55 1655 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 RECKO95980 971 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 DRC1Q96MC2 740 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 CLEC11AQ9Y240 323 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 PCNTO95613 3336 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 PDS5BQ9NTI5 1447 aa3.8□□□□□ -1.8
CCSAP-202ENST00000366686 LILRB3O75022 631 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 GDPD2Q9HCC8 539 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 ABCA6Q8N139 1617 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 TRIM34Q9BYJ4 488 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 TBC1D2Q9BYX2 928 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 CABP2Q9NPB3 220 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 ACIN1Q9UKV3 1341 aaKnown RBP3.79□□□□□ -1.8
CCSAP-202ENST00000366686 SYNJ2O15056 1496 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 EPRSP07814 1512 aaKnown RBP3.79□□□□□ -1.8
CCSAP-202ENST00000366686 KDM4FA0A1W2PPD8 638 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 SPTLC1O15269 473 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 CLCN1P35523 988 aa3.79□□□□□ -1.8
CCSAP-202ENST00000366686 DEPDC5O75140 1603 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 SREK1Q8WXA9 508 aaKnown RBP3.78□□□□□ -1.8
CCSAP-202ENST00000366686 RIMS1Q86UR5 1692 aaKnown RBP3.78□□□□□ -1.8
CCSAP-202ENST00000366686 ITSN2Q9NZM3 1697 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 TCF3P15923 654 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 BRD2P25440 801 aaKnown RBP3.78□□□□□ -1.8
CCSAP-202ENST00000366686 CLK2P49760 499 aaKnown RBP3.78□□□□□ -1.8
CCSAP-202ENST00000366686 TBC1D2BQ9UPU7 963 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 PAK3O75914 559 aaPredicted RBP3.78□□□□□ -1.8
CCSAP-202ENST00000366686 CC2D2BQ6DHV5 1058 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 BEGAINQ9BUH8 593 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 USP35Q9P2H5 1018 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 ABCC2Q92887 1545 aa3.78□□□□□ -1.8
CCSAP-202ENST00000366686 E9PCH4 1651 aa3.78□□□□□ -1.81
CCSAP-202ENST00000366686 DKK1O94907 266 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 SSFA2P28290 1259 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 RAD51AP2Q09MP3 1159 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 L3MBTL3Q96JM7 780 aaPredicted RBP3.77□□□□□ -1.81
CCSAP-202ENST00000366686 PALM3A6NDB9 673 aaPredicted RBP3.77□□□□□ -1.81
CCSAP-202ENST00000366686 POTEHQ6S545 545 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 TET3O43151 1660 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 ADGBQ8N7X0 1667 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 MRPL58Q14197 206 aaKnown RBP3.77□□□□□ -1.81
CCSAP-202ENST00000366686 GIMAP6Q6P9H5 292 aa3.77□□□□□ -1.81
CCSAP-202ENST00000366686 CALR3Q96L12 384 aaKnown RBP3.77□□□□□ -1.81
CCSAP-202ENST00000366686 ARHGEF40Q8TER5 1519 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 SOWAHDA6NJG2 315 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 PITPNM1O00562 1244 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 PRR29P0C7W0 189 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 FXR2P51116 673 aaKnown RBP eCLIP3.76□□□□□ -1.816e-9■□□□□ 8.6
CCSAP-202ENST00000366686 USP54Q70EL1 1684 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 SNAPC4Q5SXM2 1469 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 MAGI3Q5TCQ9 1506 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 MAP3K13O43283 966 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 HDGFL1Q5TGJ6 251 aa3.76□□□□□ -1.81
CCSAP-202ENST00000366686 METTL3Q86U44 580 aaKnown RBP3.75□□□□□ -1.81
CCSAP-202ENST00000366686 UBXN4Q92575 508 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 MAFBQ9Y5Q3 323 aaPredicted RBP3.75□□□□□ -1.81
CCSAP-202ENST00000366686 TTLL12Q14166 644 aaPredicted RBP3.75□□□□□ -1.81
CCSAP-202ENST00000366686 CERS3Q8IU89 383 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 C1orf216Q8TAB5 229 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 SPIRE2Q8WWL2 714 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 CDHR5Q9HBB8 845 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 QRICH2Q9H0J4 1663 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 ABCC10Q5T3U5 1492 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 SMARCA5O60264 1052 aaPredicted RBP3.75□□□□□ -1.81
CCSAP-202ENST00000366686 RSBN1LQ6PCB5 846 aaPredicted RBP3.75□□□□□ -1.81
CCSAP-202ENST00000366686 PXYLP1Q8TE99 480 aa3.75□□□□□ -1.81
CCSAP-202ENST00000366686 CWC22Q9HCG8 908 aaKnown RBP3.75□□□□□ -1.81
CCSAP-202ENST00000366686 G3V3G9 751 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 ZNF662Q6ZS27 426 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 LARGE2Q8N3Y3 721 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 ATP1B4Q9UN42 357 aaPredicted RBP3.74□□□□□ -1.81
CCSAP-202ENST00000366686 RNF17Q9BXT8 1623 aaKnown RBP3.74□□□□□ -1.81
CCSAP-202ENST00000366686 ZC3H6P61129 1189 aaKnown RBP3.74□□□□□ -1.81
CCSAP-202ENST00000366686 COL19A1Q14993 1142 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 UBE2Q2Q8WVN8 375 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 CUEDC1Q9NWM3 386 aaPredicted RBP3.74□□□□□ -1.81
CCSAP-202ENST00000366686 CEP170BQ9Y4F5 1589 aaPredicted RBP3.74□□□□□ -1.81
CCSAP-202ENST00000366686 CCDC88BA6NC98 1476 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 PRR7Q8TB68 274 aa3.74□□□□□ -1.81
CCSAP-202ENST00000366686 RBM46Q8TBY0 533 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms