RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NSD3Q9BZ95 1437 aa25.05■■□□□ 1.6
TRIM58-201ENST00000366481 PLPPR3Q6T4P5 718 aa25.04■■□□□ 1.6
TRIM58-201ENST00000366481 TRMT2AQ8IZ69 625 aaKnown RBP25.04■■□□□ 1.6
TRIM58-201ENST00000366481 CABP2Q9NPB3 220 aa25.03■■□□□ 1.6
TRIM58-201ENST00000366481 ATP7AQ04656 1500 aa25.03■■□□□ 1.6
TRIM58-201ENST00000366481 IQGAP1P46940 1657 aa25.02■■□□□ 1.6
TRIM58-201ENST00000366481 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
TRIM58-201ENST00000366481 INSRP06213 1382 aa25.02■■□□□ 1.6
TRIM58-201ENST00000366481 RTEL1-TNFRSF6BF6WH68 1400 aa25.02■■□□□ 1.6
TRIM58-201ENST00000366481 SYNMO15061 1565 aa25■■□□□ 1.59
TRIM58-201ENST00000366481 PANK2Q9BZ23 570 aa25■■□□□ 1.59
TRIM58-201ENST00000366481 SPHKAPQ2M3C7 1700 aa25■■□□□ 1.59
TRIM58-201ENST00000366481 U2AF1L5P0DN76 240 aaPredicted RBP24.99■■□□□ 1.59
TRIM58-201ENST00000366481 RLBP1P12271 317 aa24.99■■□□□ 1.59
TRIM58-201ENST00000366481 U2AF1Q01081 240 aaKnown RBP eCLIP24.99■■□□□ 1.59
TRIM58-201ENST00000366481 ZMYND15Q9H091 742 aa24.99■■□□□ 1.59
TRIM58-201ENST00000366481 MLECQ14165 292 aa24.97■■□□□ 1.59
TRIM58-201ENST00000366481 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
TRIM58-201ENST00000366481 XRCC6P12956 609 aaKnown RBP eCLIP24.97■■□□□ 1.59
TRIM58-201ENST00000366481 U2SURPO15042 1029 aaKnown RBP24.96■■□□□ 1.59
TRIM58-201ENST00000366481 TSR2Q969E8 191 aaKnown RBP24.95■■□□□ 1.58
TRIM58-201ENST00000366481 MYOM1P52179 1685 aa24.94■■□□□ 1.58
TRIM58-201ENST00000366481 ASXL2Q76L83 1435 aa24.94■■□□□ 1.58
TRIM58-201ENST00000366481 GGNBP2Q9H3C7 697 aa24.93■■□□□ 1.58
TRIM58-201ENST00000366481 UHRF1BP1LA0JNW5 1464 aa24.93■■□□□ 1.58
TRIM58-201ENST00000366481 RUNDC1Q96C34 613 aa24.92■■□□□ 1.58
TRIM58-201ENST00000366481 PCDHB15Q9Y5E8 787 aa24.92■■□□□ 1.58
TRIM58-201ENST00000366481 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
TRIM58-201ENST00000366481 NPC1L1Q9UHC9 1359 aa24.91■■□□□ 1.58
TRIM58-201ENST00000366481 CEP152O94986 1710 aa24.91■■□□□ 1.58
TRIM58-201ENST00000366481 RARSP54136 660 aaKnown RBP24.91■■□□□ 1.58
TRIM58-201ENST00000366481 C14orf93Q9H972 538 aaKnown RBP24.9■■□□□ 1.58
TRIM58-201ENST00000366481 SRPK2P78362 688 aaKnown RBP24.9■■□□□ 1.58
TRIM58-201ENST00000366481 KDM5AP29375 1690 aaKnown RBP24.9■■□□□ 1.58
TRIM58-201ENST00000366481 FBLN1P23142 703 aa24.9■■□□□ 1.58
TRIM58-201ENST00000366481 TRIM44Q96DX7 344 aaPredicted RBP24.9■■□□□ 1.58
TRIM58-201ENST00000366481 TET3O43151 1660 aa24.89■■□□□ 1.58
TRIM58-201ENST00000366481 MAPK8IP3Q9UPT6 1336 aa24.88■■□□□ 1.57
TRIM58-201ENST00000366481 USP19O94966 1318 aa24.88■■□□□ 1.57
TRIM58-201ENST00000366481 CLASP1Q7Z460 1538 aa24.88■■□□□ 1.57
TRIM58-201ENST00000366481 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
TRIM58-201ENST00000366481 TBC1D2Q9BYX2 928 aa24.87■■□□□ 1.57
TRIM58-201ENST00000366481 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
TRIM58-201ENST00000366481 CGNL1Q0VF96 1302 aa24.86■■□□□ 1.57
TRIM58-201ENST00000366481 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
TRIM58-201ENST00000366481 NPATQ14207 1427 aa24.86■■□□□ 1.57
TRIM58-201ENST00000366481 CFAP53Q96M91 514 aa24.85■■□□□ 1.57
TRIM58-201ENST00000366481 MCM4P33991 863 aa24.84■■□□□ 1.57
TRIM58-201ENST00000366481 PDE3AQ14432 1141 aa24.84■■□□□ 1.57
TRIM58-201ENST00000366481 POLR3AO14802 1390 aaPredicted RBP24.84■■□□□ 1.57
TRIM58-201ENST00000366481 TRAK2O60296 914 aa24.84■■□□□ 1.57
TRIM58-201ENST00000366481 CLCN1P35523 988 aa24.82■■□□□ 1.56
TRIM58-201ENST00000366481 MFAP1P55081 439 aaKnown RBP24.82■■□□□ 1.56
TRIM58-201ENST00000366481 MROH1Q8NDA8 1641 aa24.82■■□□□ 1.56
TRIM58-201ENST00000366481 MROH2AA6NES4 1674 aa24.81■■□□□ 1.56
TRIM58-201ENST00000366481 SLC24A1O60721 1099 aa24.81■■□□□ 1.56
TRIM58-201ENST00000366481 RRP9O43818 475 aaKnown RBP24.8■■□□□ 1.56
TRIM58-201ENST00000366481 IDI1Q13907 227 aa24.8■■□□□ 1.56
TRIM58-201ENST00000366481 PDZRN3Q9UPQ7 1066 aa24.8■■□□□ 1.56
TRIM58-201ENST00000366481 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
TRIM58-201ENST00000366481 PPRC1Q5VV67 1664 aaKnown RBP24.79■■□□□ 1.56
TRIM58-201ENST00000366481 DEPDC5O75140 1603 aa24.79■■□□□ 1.56
TRIM58-201ENST00000366481 FTSJ3Q8IY81 847 aaKnown RBP24.79■■□□□ 1.56
TRIM58-201ENST00000366481 MYOM2P54296 1465 aa24.78■■□□□ 1.56
TRIM58-201ENST00000366481 EVC2Q86UK5 1308 aa24.78■■□□□ 1.56
TRIM58-201ENST00000366481 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
TRIM58-201ENST00000366481 EFCAB6Q5THR3 1501 aa24.78■■□□□ 1.56
TRIM58-201ENST00000366481 EXOSC9Q06265 439 aaKnown RBP24.78■■□□□ 1.56
TRIM58-201ENST00000366481 ANTXR1Q9H6X2 564 aa24.77■■□□□ 1.56
TRIM58-201ENST00000366481 STAG3Q9UJ98 1225 aa24.77■■□□□ 1.56
TRIM58-201ENST00000366481 MRE11P49959 708 aa24.76■■□□□ 1.55
TRIM58-201ENST00000366481 SMC4Q9NTJ3 1288 aa24.76■■□□□ 1.55
TRIM58-201ENST00000366481 CD109Q6YHK3 1445 aa24.76■■□□□ 1.55
TRIM58-201ENST00000366481 ESPNB1AK53 854 aa24.75■■□□□ 1.55
TRIM58-201ENST00000366481 FAM69CQ0P6D2 419 aa24.74■■□□□ 1.55
TRIM58-201ENST00000366481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.74■■□□□ 1.55
TRIM58-201ENST00000366481 CHMP5Q9NZZ3 219 aa24.74■■□□□ 1.55
TRIM58-201ENST00000366481 TBC1D32Q96NH3 1257 aa24.74■■□□□ 1.55
TRIM58-201ENST00000366481 ZNF518AQ6AHZ1 1483 aa24.74■■□□□ 1.55
TRIM58-201ENST00000366481 ABCA9Q8IUA7 1624 aa24.74■■□□□ 1.55
TRIM58-201ENST00000366481 KIF1BO60333 1816 aa24.73■■□□□ 1.55
TRIM58-201ENST00000366481 VGFO15240 615 aaPredicted RBP24.73■■□□□ 1.55
TRIM58-201ENST00000366481 ITPRIPQ8IWB1 547 aa24.73■■□□□ 1.55
TRIM58-201ENST00000366481 PRAM1Q96QH2 718 aa24.73■■□□□ 1.55
TRIM58-201ENST00000366481 FBXO31Q5XUX0 539 aaPredicted RBP24.73■■□□□ 1.55
TRIM58-201ENST00000366481 GRPEL1Q9HAV7 217 aa24.73■■□□□ 1.55
TRIM58-201ENST00000366481 PMFBP1Q8TBY8 1022 aa24.73■■□□□ 1.55
TRIM58-201ENST00000366481 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
TRIM58-201ENST00000366481 HSCBQ8IWL3 235 aa24.71■■□□□ 1.55
TRIM58-201ENST00000366481 WDR63Q8IWG1 891 aa24.71■■□□□ 1.55
TRIM58-201ENST00000366481 ARAP3Q8WWN8 1544 aa24.69■■□□□ 1.54
TRIM58-201ENST00000366481 SSH1Q8WYL5 1049 aa24.69■■□□□ 1.54
TRIM58-201ENST00000366481 C22orf23Q9BZE7 217 aa24.69■■□□□ 1.54
TRIM58-201ENST00000366481 SBNO2Q9Y2G9 1366 aa24.69■■□□□ 1.54
TRIM58-201ENST00000366481 DZIP1LQ8IYY4 767 aaKnown RBP24.68■■□□□ 1.54
TRIM58-201ENST00000366481 FSD2A1L4K1 749 aa24.68■■□□□ 1.54
TRIM58-201ENST00000366481 ELL2O00472 640 aaPredicted RBP24.68■■□□□ 1.54
TRIM58-201ENST00000366481 ZKSCAN2Q63HK3 967 aa24.68■■□□□ 1.54
TRIM58-201ENST00000366481 THUMPD2Q9BTF0 503 aaKnown RBP24.68■■□□□ 1.54
TRIM58-201ENST00000366481 A0A1W2PP64 1363 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms