RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 EN1Q05925 392 aaPredicted RBP2.68□□□□□ -1.98
RNU6-340P-201ENST00000364005 DDX27Q96GQ7 796 aaKnown RBP2.68□□□□□ -1.98
RNU6-340P-201ENST00000364005 DCAF5Q96JK2 942 aa2.68□□□□□ -1.98
RNU6-340P-201ENST00000364005 ZFP42Q96MM3 310 aa2.68□□□□□ -1.98
RNU6-340P-201ENST00000364005 SOBPA7XYQ1 873 aa2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 ZBTB24O43167 697 aaPredicted RBP2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 FURINP09958 794 aa2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 SCUBE3Q8IX30 993 aa2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 CERKQ8TCT0 537 aa2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 WHAMMQ8TF30 809 aa2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 SPSB2Q99619 263 aa2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 LARP6Q9BRS8 491 aaKnown RBP2.67□□□□□ -1.98
RNU6-340P-201ENST00000364005 CAPN5O15484 640 aaPredicted RBP2.66□□□□□ -1.98
RNU6-340P-201ENST00000364005 BAG6P46379 1132 aa2.66□□□□□ -1.98
RNU6-340P-201ENST00000364005 NBR1Q14596 966 aa2.66□□□□□ -1.98
RNU6-340P-201ENST00000364005 GPR161Q8N6U8 529 aaKnown RBP2.66□□□□□ -1.98
RNU6-340P-201ENST00000364005 PPFIA3O75145 1194 aa2.65□□□□□ -1.99
RNU6-340P-201ENST00000364005 KMT5BQ4FZB7 885 aa2.65□□□□□ -1.99
RNU6-340P-201ENST00000364005 ARID1BQ8NFD5 2236 aaPredicted RBP2.65□□□□□ -1.99
RNU6-340P-201ENST00000364005 ALDH1A1P00352 501 aa2.64□□□□□ -1.99
RNU6-340P-201ENST00000364005 SLURP2P0DP57 97 aa2.64□□□□□ -1.99
RNU6-340P-201ENST00000364005 REPIN1Q9BWE0 567 aaKnown RBP2.64□□□□□ -1.99
RNU6-340P-201ENST00000364005 CFHP08603 1231 aa2.63□□□□□ -1.99
RNU6-340P-201ENST00000364005 TRIM32Q13049 653 aa2.63□□□□□ -1.99
RNU6-340P-201ENST00000364005 MFSD10Q14728 455 aa2.63□□□□□ -1.99
RNU6-340P-201ENST00000364005 COL25A1Q9BXS0 654 aaPredicted RBP2.63□□□□□ -1.99
RNU6-340P-201ENST00000364005 RNFT1Q5M7Z0 435 aa2.62□□□□□ -1.99
RNU6-340P-201ENST00000364005 RC3H1Q5TC82 1133 aaKnown RBP2.62□□□□□ -1.99
RNU6-340P-201ENST00000364005 EYA1Q99502 592 aa2.62□□□□□ -1.99
RNU6-340P-201ENST00000364005 DPYSL4O14531 572 aa2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 SCARF1Q14162 830 aa2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 PUS10Q3MIT2 529 aaKnown RBP2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 ZMYM1Q5SVZ6 1142 aa2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 FAM160A2Q8N612 972 aaPredicted RBP2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 PURBQ96QR8 312 aaKnown RBP2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 RBM27Q9P2N5 1060 aaKnown RBP2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 CNTNAP5Q8WYK1 1306 aa2.61□□□□□ -1.99
RNU6-340P-201ENST00000364005 PHF20L1A8MW92 1017 aa2.6□□□□□ -1.99
RNU6-340P-201ENST00000364005 RGL2O15211 777 aa2.6□□□□□ -1.99
RNU6-340P-201ENST00000364005 MAN1A2O60476 641 aa2.6□□□□□ -1.99
RNU6-340P-201ENST00000364005 PRIM1P49642 420 aaKnown RBP2.6□□□□□ -1.99
RNU6-340P-201ENST00000364005 MRPL14Q6P1L8 145 aaKnown RBP2.6□□□□□ -1.99
RNU6-340P-201ENST00000364005 TTC13Q8NBP0 860 aa2.6□□□□□ -1.99
RNU6-340P-201ENST00000364005 ECM2O94769 699 aaPredicted RBP2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 ITGB7P26010 798 aa2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 PADI6Q6TGC4 694 aa2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 LYPD4Q6UWN0 246 aa2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 CDHR5Q9HBB8 845 aa2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 PRDM9Q9NQV7 894 aa2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 WASF2Q9Y6W5 498 aa2.59□□□□□ -1.99
RNU6-340P-201ENST00000364005 SCO2A0A1W2PP80 73 aa2.58□□□□□ -2
RNU6-340P-201ENST00000364005 SLC10A3P09131 477 aa2.58□□□□□ -2
RNU6-340P-201ENST00000364005 SKOR1P84550 965 aa2.58□□□□□ -2
RNU6-340P-201ENST00000364005 BEND7Q8N7W2 519 aaPredicted RBP2.58□□□□□ -2
RNU6-340P-201ENST00000364005 THAP11Q96EK4 314 aa2.58□□□□□ -2
RNU6-340P-201ENST00000364005 SIAH2O43255 324 aa2.57□□□□□ -2
RNU6-340P-201ENST00000364005 YBX3P16989 372 aaKnown RBP eCLIP2.57□□□□□ -2
RNU6-340P-201ENST00000364005 MAP3K10Q02779 954 aa2.57□□□□□ -2
RNU6-340P-201ENST00000364005 KRTAP1-1Q07627 177 aa2.57□□□□□ -2
RNU6-340P-201ENST00000364005 KRBA1A5PL33 1030 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 FECHP22830 423 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 DNAJB2P25686 324 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 WNT7BP56706 349 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 NBPF11Q86T75 865 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 SEMA6BQ9H3T3 888 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 TMEM134Q9H6X4 195 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 ENAMQ9NRM1 1142 aa2.56□□□□□ -2
RNU6-340P-201ENST00000364005 ADAMTS2O95450 1211 aa2.55□□□□□ -2
RNU6-340P-201ENST00000364005 FMNL1O95466 1100 aaPredicted RBP2.55□□□□□ -2
RNU6-340P-201ENST00000364005 CELA2BP08218 269 aaPredicted RBP2.55□□□□□ -2
RNU6-340P-201ENST00000364005 CAMK2BQ13554 666 aa2.55□□□□□ -2
RNU6-340P-201ENST00000364005 PODNQ7Z5L7 613 aa2.55□□□□□ -2
RNU6-340P-201ENST00000364005 NANOS1Q8WY41 292 aaKnown RBP2.55□□□□□ -2
RNU6-340P-201ENST00000364005 ZFP64Q9NPA5 681 aa2.55□□□□□ -2
RNU6-340P-201ENST00000364005 FZD5Q13467 585 aa2.54□□□□□ -2
RNU6-340P-201ENST00000364005 FOXD4L6Q3SYB3 417 aaPredicted RBP2.54□□□□□ -2
RNU6-340P-201ENST00000364005 MORN1Q5T089 497 aa2.54□□□□□ -2
RNU6-340P-201ENST00000364005 ARTNQ5T4W7 220 aa2.54□□□□□ -2
RNU6-340P-201ENST00000364005 FOXD4L3Q6VB84 417 aaPredicted RBP2.54□□□□□ -2
RNU6-340P-201ENST00000364005 NPDC1Q9NQX5 325 aaPredicted RBP2.54□□□□□ -2
RNU6-340P-201ENST00000364005 GRXCR2A6NFK2 248 aa2.53□□□□□ -2
RNU6-340P-201ENST00000364005 C6orf118Q5T5N4 469 aa2.53□□□□□ -2
RNU6-340P-201ENST00000364005 HS6ST3Q8IZP7 471 aa2.53□□□□□ -2
RNU6-340P-201ENST00000364005 EHBP1Q8NDI1 1231 aa2.53□□□□□ -2
RNU6-340P-201ENST00000364005 RYDENQ9NUL5 291 aaKnown RBP2.53□□□□□ -2
RNU6-340P-201ENST00000364005 RCCD1A6NED2 376 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 TIMP2P16035 220 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 NKX1-1Q15270 411 aaPredicted RBP2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 MSS51Q4VC12 460 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 BRICD5Q6PL45 260 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 VWA5B2Q8N398 1253 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 NEDD1Q8NHV4 660 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 DNMT3LQ9UJW3 386 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 SLC27A5Q9Y2P5 690 aa2.52□□□□□ -2.01
RNU6-340P-201ENST00000364005 OSBPP22059 807 aa2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 TXKP42681 527 aa2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 WDR4P57081 412 aaKnown RBP2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 PTSQ03393 145 aa2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 SRSF11Q05519 484 aaKnown RBP2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 PDIA6Q15084 440 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms