RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-202ENST00000361781 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
SGMS1-202ENST00000361781 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
SGMS1-202ENST00000361781 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
SGMS1-202ENST00000361781 ESPNB1AK53 854 aa16.92■□□□□ 0.3
SGMS1-202ENST00000361781 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
SGMS1-202ENST00000361781 FBLN1P23142 703 aa16.91■□□□□ 0.3
SGMS1-202ENST00000361781 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
SGMS1-202ENST00000361781 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
SGMS1-202ENST00000361781 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-202ENST00000361781 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
SGMS1-202ENST00000361781 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
SGMS1-202ENST00000361781 ST18O60284 1047 aa16.9■□□□□ 0.3
SGMS1-202ENST00000361781 TRIM27P14373 513 aa16.9■□□□□ 0.3
SGMS1-202ENST00000361781 KCNJ4P48050 445 aa16.9■□□□□ 0.3
SGMS1-202ENST00000361781 SKOR2Q2VWA4 1001 aaPredicted RBP16.89■□□□□ 0.29
SGMS1-202ENST00000361781 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
SGMS1-202ENST00000361781 CARD14Q9BXL6 1004 aa16.89■□□□□ 0.29
SGMS1-202ENST00000361781 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
SGMS1-202ENST00000361781 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
SGMS1-202ENST00000361781 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
SGMS1-202ENST00000361781 PRPF40AO75400 957 aaKnown RBP16.87■□□□□ 0.29
SGMS1-202ENST00000361781 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
SGMS1-202ENST00000361781 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-202ENST00000361781 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
SGMS1-202ENST00000361781 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
SGMS1-202ENST00000361781 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
SGMS1-202ENST00000361781 MCCP23508 829 aa16.86■□□□□ 0.29
SGMS1-202ENST00000361781 TNPO1Q92973 898 aaKnown RBP16.86■□□□□ 0.29
SGMS1-202ENST00000361781 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
SGMS1-202ENST00000361781 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
SGMS1-202ENST00000361781 PTMSP20962 102 aa16.85■□□□□ 0.29
SGMS1-202ENST00000361781 WDR62O43379 1518 aa16.84■□□□□ 0.29
SGMS1-202ENST00000361781 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-202ENST00000361781 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
SGMS1-202ENST00000361781 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
SGMS1-202ENST00000361781 SSFA2P28290 1259 aa16.84■□□□□ 0.29
SGMS1-202ENST00000361781 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
SGMS1-202ENST00000361781 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
SGMS1-202ENST00000361781 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
SGMS1-202ENST00000361781 AAMPQ13685 434 aa16.82■□□□□ 0.28
SGMS1-202ENST00000361781 LTV1Q96GA3 475 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-202ENST00000361781 CDC45O75419 566 aa16.82■□□□□ 0.28
SGMS1-202ENST00000361781 NAP1L2Q9ULW6 460 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-202ENST00000361781 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
SGMS1-202ENST00000361781 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
SGMS1-202ENST00000361781 DRC7Q8IY82 874 aa16.81■□□□□ 0.28
SGMS1-202ENST00000361781 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SGMS1-202ENST00000361781 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
SGMS1-202ENST00000361781 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
SGMS1-202ENST00000361781 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
SGMS1-202ENST00000361781 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
SGMS1-202ENST00000361781 PRAM1Q96QH2 718 aa16.8■□□□□ 0.28
SGMS1-202ENST00000361781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
SGMS1-202ENST00000361781 CABP1Q9NZU7 370 aa16.8■□□□□ 0.28
SGMS1-202ENST00000361781 BCORL1Q5H9F3 1711 aa16.8■□□□□ 0.28
SGMS1-202ENST00000361781 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
SGMS1-202ENST00000361781 NEK4P51957 841 aa16.8■□□□□ 0.28
SGMS1-202ENST00000361781 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
SGMS1-202ENST00000361781 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
SGMS1-202ENST00000361781 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
SGMS1-202ENST00000361781 HMMRO75330 724 aa16.79■□□□□ 0.28
SGMS1-202ENST00000361781 ATP10BO94823 1461 aa16.79■□□□□ 0.28
SGMS1-202ENST00000361781 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
SGMS1-202ENST00000361781 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
SGMS1-202ENST00000361781 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
SGMS1-202ENST00000361781 PKNOX2Q96KN3 472 aa16.78■□□□□ 0.28
SGMS1-202ENST00000361781 SMARCA5O60264 1052 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-202ENST00000361781 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.28
SGMS1-202ENST00000361781 FAM135AQ9P2D6 1515 aa16.77■□□□□ 0.28
SGMS1-202ENST00000361781 FGD1P98174 961 aa16.77■□□□□ 0.28
SGMS1-202ENST00000361781 API5Q9BZZ5 524 aaKnown RBP16.77■□□□□ 0.28
SGMS1-202ENST00000361781 NUCB2P80303 420 aa16.77■□□□□ 0.27
SGMS1-202ENST00000361781 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.27
SGMS1-202ENST00000361781 ZNF428Q96B54 188 aa16.77■□□□□ 0.27
SGMS1-202ENST00000361781 GNAI1P63096 354 aa16.76■□□□□ 0.27
SGMS1-202ENST00000361781 NINLQ9Y2I6 1382 aa16.76■□□□□ 0.27
SGMS1-202ENST00000361781 A2MP01023 1474 aa16.76■□□□□ 0.27
SGMS1-202ENST00000361781 REC8O95072 547 aa16.76■□□□□ 0.27
SGMS1-202ENST00000361781 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
SGMS1-202ENST00000361781 COL17A1Q9UMD9 1497 aaPredicted RBP16.76■□□□□ 0.27
SGMS1-202ENST00000361781 UBE2Q2Q8WVN8 375 aa16.75■□□□□ 0.27
SGMS1-202ENST00000361781 COG3Q96JB2 828 aa16.75■□□□□ 0.27
SGMS1-202ENST00000361781 SYAP1Q96A49 352 aaPredicted RBP16.75■□□□□ 0.27
SGMS1-202ENST00000361781 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
SGMS1-202ENST00000361781 KIF14Q15058 1648 aa16.74■□□□□ 0.27
SGMS1-202ENST00000361781 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
SGMS1-202ENST00000361781 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
SGMS1-202ENST00000361781 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
SGMS1-202ENST00000361781 LMOD3Q0VAK6 560 aa16.74■□□□□ 0.27
SGMS1-202ENST00000361781 TBC1D9Q6ZT07 1266 aa16.74■□□□□ 0.27
SGMS1-202ENST00000361781 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
SGMS1-202ENST00000361781 KDM5CP41229 1560 aa16.73■□□□□ 0.27
SGMS1-202ENST00000361781 BLMP54132 1417 aaPredicted RBP16.73■□□□□ 0.27
SGMS1-202ENST00000361781 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
SGMS1-202ENST00000361781 ZMYM4Q5VZL5 1548 aa16.73■□□□□ 0.27
SGMS1-202ENST00000361781 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
SGMS1-202ENST00000361781 XPCQ01831 940 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-202ENST00000361781 GCC1Q96CN9 775 aa16.72■□□□□ 0.27
SGMS1-202ENST00000361781 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms