RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 NBPF8Q3BBV2 869 aa25.75■■□□□ 1.71
SMURF1-201ENST00000361125 ABTB2Q8N961 1025 aa25.74■■□□□ 1.71
SMURF1-201ENST00000361125 SKOR2Q2VWA4 1001 aaPredicted RBP25.74■■□□□ 1.71
SMURF1-201ENST00000361125 ESCO1Q5FWF5 840 aa25.74■■□□□ 1.71
SMURF1-201ENST00000361125 NOL10Q9BSC4 688 aaKnown RBP25.74■■□□□ 1.71
SMURF1-201ENST00000361125 TCP11L2Q8N4U5 519 aa25.73■■□□□ 1.71
SMURF1-201ENST00000361125 NFKBIBQ15653 356 aa25.73■■□□□ 1.71
SMURF1-201ENST00000361125 ATP6V1DQ9Y5K8 247 aa25.73■■□□□ 1.71
SMURF1-201ENST00000361125 TPD52L1Q16890 204 aaPredicted RBP25.72■■□□□ 1.71
SMURF1-201ENST00000361125 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
SMURF1-201ENST00000361125 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.71
SMURF1-201ENST00000361125 CCDC184Q52MB2 194 aa25.7■■□□□ 1.7
SMURF1-201ENST00000361125 AMOTL1Q8IY63 956 aa25.7■■□□□ 1.7
SMURF1-201ENST00000361125 INTS3Q68E01 1043 aaKnown RBP25.7■■□□□ 1.7
SMURF1-201ENST00000361125 PRKAR2BP31323 418 aa25.69■■□□□ 1.7
SMURF1-201ENST00000361125 HECW1Q76N89 1606 aa25.69■■□□□ 1.7
SMURF1-201ENST00000361125 KIAA1107Q9UPP5 1409 aa25.69■■□□□ 1.7
SMURF1-201ENST00000361125 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.69■■□□□ 1.7
SMURF1-201ENST00000361125 NEUROD6Q96NK8 337 aa25.69■■□□□ 1.7
SMURF1-201ENST00000361125 CHMP5Q9NZZ3 219 aa25.68■■□□□ 1.7
SMURF1-201ENST00000361125 UBTFL1P0CB47 393 aaPredicted RBP25.68■■□□□ 1.7
SMURF1-201ENST00000361125 CHMP4CQ96CF2 233 aa25.68■■□□□ 1.7
SMURF1-201ENST00000361125 TRIM34Q9BYJ4 488 aa25.68■■□□□ 1.7
SMURF1-201ENST00000361125 FOSBP53539 338 aa25.68■■□□□ 1.7
SMURF1-201ENST00000361125 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
SMURF1-201ENST00000361125 TRIM29Q14134 588 aa25.67■■□□□ 1.7
SMURF1-201ENST00000361125 CDK19Q9BWU1 502 aa25.67■■□□□ 1.7
SMURF1-201ENST00000361125 SMG6Q86US8 1419 aaKnown RBP25.66■■□□□ 1.7
SMURF1-201ENST00000361125 GPRASP1Q5JY77 1395 aa25.66■■□□□ 1.7
SMURF1-201ENST00000361125 GOLGA6L19H0YKK7 550 aa25.66■■□□□ 1.7
SMURF1-201ENST00000361125 CPLX1O14810 134 aa25.66■■□□□ 1.7
SMURF1-201ENST00000361125 RNF20Q5VTR2 975 aa25.65■■□□□ 1.7
SMURF1-201ENST00000361125 NFXL1Q6ZNB6 911 aa25.65■■□□□ 1.7
SMURF1-201ENST00000361125 HSP90AB4PQ58FF6 505 aa25.65■■□□□ 1.7
SMURF1-201ENST00000361125 EXOSC9Q06265 439 aaKnown RBP25.64■■□□□ 1.7
SMURF1-201ENST00000361125 CPLX2Q6PUV4 134 aaKnown RBP25.64■■□□□ 1.7
SMURF1-201ENST00000361125 ERC2O15083 957 aa25.64■■□□□ 1.7
SMURF1-201ENST00000361125 BECN2A8MW95 431 aa25.64■■□□□ 1.69
SMURF1-201ENST00000361125 TROQ12816 1431 aaPredicted RBP25.64■■□□□ 1.69
SMURF1-201ENST00000361125 TRDNQ13061 729 aa25.63■■□□□ 1.69
SMURF1-201ENST00000361125 HSP90AA2PQ14568 343 aaPredicted RBP25.63■■□□□ 1.69
SMURF1-201ENST00000361125 CABP1Q9NZU7 370 aa25.63■■□□□ 1.69
SMURF1-201ENST00000361125 PNISRQ8TF01 805 aaKnown RBP25.62■■□□□ 1.69
SMURF1-201ENST00000361125 C22orf23Q9BZE7 217 aa25.62■■□□□ 1.69
SMURF1-201ENST00000361125 ANO8Q9HCE9 1232 aaPredicted RBP25.62■■□□□ 1.69
SMURF1-201ENST00000361125 DAPK1P53355 1430 aa25.62■■□□□ 1.69
SMURF1-201ENST00000361125 TPM3P06753 285 aa25.62■■□□□ 1.69
SMURF1-201ENST00000361125 DHX16O60231 1041 aaKnown RBP25.62■■□□□ 1.69
SMURF1-201ENST00000361125 PROSER2Q86WR7 435 aaPredicted RBP25.61■■□□□ 1.69
SMURF1-201ENST00000361125 RAPGEF3O95398 923 aa25.61■■□□□ 1.69
SMURF1-201ENST00000361125 C1orf115Q9H7X2 142 aa25.61■■□□□ 1.69
SMURF1-201ENST00000361125 VPS37CA5D8V6 355 aaPredicted RBP25.61■■□□□ 1.69
SMURF1-201ENST00000361125 TSR2Q969E8 191 aaKnown RBP25.61■■□□□ 1.69
SMURF1-201ENST00000361125 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
SMURF1-201ENST00000361125 PLEKHH2Q8IVE3 1493 aa25.6■■□□□ 1.69
SMURF1-201ENST00000361125 CCDC30Q5VVM6 783 aa25.6■■□□□ 1.69
SMURF1-201ENST00000361125 AAMPQ13685 434 aa25.59■■□□□ 1.69
SMURF1-201ENST00000361125 WASHC4Q2M389 1173 aa25.59■■□□□ 1.69
SMURF1-201ENST00000361125 CDK13Q14004 1512 aaKnown RBP25.59■■□□□ 1.69
SMURF1-201ENST00000361125 FYB1O15117 783 aa25.59■■□□□ 1.69
SMURF1-201ENST00000361125 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.58■■□□□ 1.69
SMURF1-201ENST00000361125 SMC3Q9UQE7 1217 aa25.58■■□□□ 1.69
SMURF1-201ENST00000361125 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
SMURF1-201ENST00000361125 SUPT6HQ7KZ85 1726 aaKnown RBP25.58■■□□□ 1.69
SMURF1-201ENST00000361125 ERBINQ96RT1 1412 aa25.57■■□□□ 1.68
SMURF1-201ENST00000361125 TWISTNBQ3B726 338 aaPredicted RBP25.57■■□□□ 1.68
SMURF1-201ENST00000361125 CDC45O75419 566 aa25.57■■□□□ 1.68
SMURF1-201ENST00000361125 BICD2Q8TD16 824 aa25.57■■□□□ 1.68
SMURF1-201ENST00000361125 NOB1Q9ULX3 412 aaKnown RBP25.57■■□□□ 1.68
SMURF1-201ENST00000361125 ERICH2A1L162 156 aa25.56■■□□□ 1.68
SMURF1-201ENST00000361125 PLEKHO1Q53GL0 409 aaPredicted RBP25.56■■□□□ 1.68
SMURF1-201ENST00000361125 RBM33Q96EV2 1170 aaKnown RBP25.56■■□□□ 1.68
SMURF1-201ENST00000361125 STRN4Q9NRL3 753 aa25.56■■□□□ 1.68
SMURF1-201ENST00000361125 HMGXB3Q12766 1538 aa25.56■■□□□ 1.68
SMURF1-201ENST00000361125 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
SMURF1-201ENST00000361125 ZNF428Q96B54 188 aa25.55■■□□□ 1.68
SMURF1-201ENST00000361125 CCDC27Q2M243 656 aa25.55■■□□□ 1.68
SMURF1-201ENST00000361125 DNMBPQ6XZF7 1577 aa25.54■■□□□ 1.68
SMURF1-201ENST00000361125 BCAR3O75815 825 aa25.54■■□□□ 1.68
SMURF1-201ENST00000361125 SULT6B1Q6IMI4 303 aa25.54■■□□□ 1.68
SMURF1-201ENST00000361125 CTDP1Q9Y5B0 961 aaPredicted RBP25.54■■□□□ 1.68
SMURF1-201ENST00000361125 RBM42Q9BTD8 480 aaKnown RBP25.54■■□□□ 1.68
SMURF1-201ENST00000361125 BACH2Q9BYV9 841 aa25.54■■□□□ 1.68
SMURF1-201ENST00000361125 A0A0U1RQG5 324 aaPredicted RBP25.53■■□□□ 1.68
SMURF1-201ENST00000361125 SURF6O75683 361 aaKnown RBP25.53■■□□□ 1.68
SMURF1-201ENST00000361125 TSR1Q2NL82 804 aaKnown RBP25.53■■□□□ 1.68
SMURF1-201ENST00000361125 NAIPQ13075 1403 aa25.53■■□□□ 1.68
SMURF1-201ENST00000361125 TPM2P07951 284 aa25.52■■□□□ 1.68
SMURF1-201ENST00000361125 KLHL34Q8N239 644 aa25.52■■□□□ 1.68
SMURF1-201ENST00000361125 TCEAL9Q9UHQ7 104 aa25.51■■□□□ 1.67
SMURF1-201ENST00000361125 KDM4AO75164 1064 aa25.51■■□□□ 1.67
SMURF1-201ENST00000361125 CEP89Q96ST8 783 aa25.51■■□□□ 1.67
SMURF1-201ENST00000361125 FSD1Q9BTV5 496 aa25.51■■□□□ 1.67
SMURF1-201ENST00000361125 NINLQ9Y2I6 1382 aa25.51■■□□□ 1.67
SMURF1-201ENST00000361125 CNTROBQ8N137 903 aa25.5■■□□□ 1.67
SMURF1-201ENST00000361125 DNAJC2Q99543 621 aaKnown RBP25.5■■□□□ 1.67
SMURF1-201ENST00000361125 THEMISQ8N1K5 641 aaPredicted RBP25.5■■□□□ 1.67
SMURF1-201ENST00000361125 PDZRN3Q9UPQ7 1066 aa25.5■■□□□ 1.67
SMURF1-201ENST00000361125 PCF11O94913 1555 aaKnown RBP25.49■■□□□ 1.67
SMURF1-201ENST00000361125 RTEL1-TNFRSF6BF6WH68 1400 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms