RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
CCL28-201ENST00000361115 NEXMIFQ5QGS0 1516 aa11.06□□□□□ -0.64
CCL28-201ENST00000361115 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
CCL28-201ENST00000361115 RGS12O14924 1447 aa11.04□□□□□ -0.64
CCL28-201ENST00000361115 TECPR2O15040 1411 aa11.03□□□□□ -0.64
CCL28-201ENST00000361115 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
CCL28-201ENST00000361115 SENP3Q9H4L4 574 aaPredicted RBP11.02□□□□□ -0.65
CCL28-201ENST00000361115 MYOM2P54296 1465 aa11.01□□□□□ -0.65
CCL28-201ENST00000361115 PPLO60437 1756 aa11.01□□□□□ -0.65
CCL28-201ENST00000361115 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
CCL28-201ENST00000361115 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
CCL28-201ENST00000361115 TRPC5Q9UL62 973 aaPredicted RBP11□□□□□ -0.65
CCL28-201ENST00000361115 SOS2Q07890 1332 aaPredicted RBP10.99□□□□□ -0.65
CCL28-201ENST00000361115 BRINP3Q76B58 766 aa10.99□□□□□ -0.65
CCL28-201ENST00000361115 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
CCL28-201ENST00000361115 SIRT1Q96EB6 747 aa10.99□□□□□ -0.65
CCL28-201ENST00000361115 ADGRB2O60241 1585 aa10.99□□□□□ -0.65
CCL28-201ENST00000361115 FNBP4Q8N3X1 1017 aaPredicted RBP10.98□□□□□ -0.65
CCL28-201ENST00000361115 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
CCL28-201ENST00000361115 IFT172Q9UG01 1749 aa10.98□□□□□ -0.65
CCL28-201ENST00000361115 AFF2P51816 1311 aa10.98□□□□□ -0.65
CCL28-201ENST00000361115 BLMP54132 1417 aaPredicted RBP10.97□□□□□ -0.65
CCL28-201ENST00000361115 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
CCL28-201ENST00000361115 CLTCL1P53675 1640 aa10.97□□□□□ -0.65
CCL28-201ENST00000361115 EIF3AQ14152 1382 aaKnown RBP10.96□□□□□ -0.65
CCL28-201ENST00000361115 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
CCL28-201ENST00000361115 DISP2A7MBM2 1401 aa10.96□□□□□ -0.66
CCL28-201ENST00000361115 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.66
CCL28-201ENST00000361115 RGPD3A6NKT7 1758 aaPredicted RBP10.96□□□□□ -0.66
CCL28-201ENST00000361115 RGPD4Q7Z3J3 1758 aa10.96□□□□□ -0.66
CCL28-201ENST00000361115 BCANQ96GW7 911 aa10.95□□□□□ -0.66
CCL28-201ENST00000361115 CCDC144AA2RUR9 1427 aa10.95□□□□□ -0.66
CCL28-201ENST00000361115 PXDNQ92626 1479 aa10.95□□□□□ -0.66
CCL28-201ENST00000361115 DLC1Q96QB1 1528 aa10.95□□□□□ -0.66
CCL28-201ENST00000361115 USP32Q8NFA0 1604 aa10.95□□□□□ -0.66
CCL28-201ENST00000361115 PARD3Q8TEW0 1356 aa10.95□□□□□ -0.66
CCL28-201ENST00000361115 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
CCL28-201ENST00000361115 SLC26A8Q96RN1 970 aa10.94□□□□□ -0.66
CCL28-201ENST00000361115 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
CCL28-201ENST00000361115 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
CCL28-201ENST00000361115 ABCA3Q99758 1704 aa10.93□□□□□ -0.66
CCL28-201ENST00000361115 PLEKHG5O94827 1062 aa10.93□□□□□ -0.66
CCL28-201ENST00000361115 SLIT2O94813 1529 aa10.93□□□□□ -0.66
CCL28-201ENST00000361115 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
CCL28-201ENST00000361115 RALGAPBQ86X10 1494 aa10.92□□□□□ -0.66
CCL28-201ENST00000361115 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
CCL28-201ENST00000361115 VGFO15240 615 aaPredicted RBP10.92□□□□□ -0.66
CCL28-201ENST00000361115 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
CCL28-201ENST00000361115 SBNO1A3KN83 1393 aa10.91□□□□□ -0.66
CCL28-201ENST00000361115 COL14A1Q05707 1796 aaKnown RBP10.91□□□□□ -0.66
CCL28-201ENST00000361115 PLCH1Q4KWH8 1693 aa10.91□□□□□ -0.66
CCL28-201ENST00000361115 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
CCL28-201ENST00000361115 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.66
CCL28-201ENST00000361115 NRAPQ86VF7 1730 aa10.9□□□□□ -0.66
CCL28-201ENST00000361115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCL28-201ENST00000361115 QTRT2Q9H974 415 aaKnown RBP10.89□□□□□ -0.67
CCL28-201ENST00000361115 RBM19Q9Y4C8 960 aaKnown RBP10.89□□□□□ -0.67
CCL28-201ENST00000361115 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
CCL28-201ENST00000361115 FKBP8Q14318 412 aa10.88□□□□□ -0.67
CCL28-201ENST00000361115 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
CCL28-201ENST00000361115 TAOK2Q9UL54 1235 aa10.88□□□□□ -0.67
CCL28-201ENST00000361115 ITSN1Q15811 1721 aa10.87□□□□□ -0.67
CCL28-201ENST00000361115 NRXN1Q9ULB1 1477 aa10.87□□□□□ -0.67
CCL28-201ENST00000361115 NUP155O75694 1391 aa10.87□□□□□ -0.67
CCL28-201ENST00000361115 ABCC11Q96J66 1382 aa10.87□□□□□ -0.67
CCL28-201ENST00000361115 GLI3P10071 1580 aa10.87□□□□□ -0.67
CCL28-201ENST00000361115 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
CCL28-201ENST00000361115 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
CCL28-201ENST00000361115 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
CCL28-201ENST00000361115 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
CCL28-201ENST00000361115 RREB1Q92766 1687 aa10.85□□□□□ -0.67
CCL28-201ENST00000361115 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
CCL28-201ENST00000361115 MSH5O43196 834 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 USP21Q9UK80 565 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 METP08581 1390 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
CCL28-201ENST00000361115 PSME1Q06323 249 aa10.83□□□□□ -0.68
CCL28-201ENST00000361115 DHX57Q6P158 1386 aaKnown RBP10.83□□□□□ -0.68
CCL28-201ENST00000361115 ATP7BP35670 1465 aa10.83□□□□□ -0.68
CCL28-201ENST00000361115 TRPM3Q9HCF6 1732 aaPredicted RBP10.83□□□□□ -0.68
CCL28-201ENST00000361115 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
CCL28-201ENST00000361115 TNS1Q9HBL0 1735 aaKnown RBP10.83□□□□□ -0.68
CCL28-201ENST00000361115 ALS2Q96Q42 1657 aa10.82□□□□□ -0.68
CCL28-201ENST00000361115 NAIPQ13075 1403 aa10.82□□□□□ -0.68
CCL28-201ENST00000361115 VPS72Q15906 364 aa10.82□□□□□ -0.68
CCL28-201ENST00000361115 SF3B2Q13435 895 aaKnown RBP10.81□□□□□ -0.68
CCL28-201ENST00000361115 UNC5CLQ8IV45 518 aa10.81□□□□□ -0.68
CCL28-201ENST00000361115 GJD4Q96KN9 370 aaPredicted RBP10.8□□□□□ -0.68
CCL28-201ENST00000361115 BRWD3Q6RI45 1802 aa10.8□□□□□ -0.68
CCL28-201ENST00000361115 ABCC6O95255 1503 aa10.8□□□□□ -0.68
CCL28-201ENST00000361115 ITGAEP38570 1179 aa10.8□□□□□ -0.68
CCL28-201ENST00000361115 PIK3C2GO75747 1445 aa10.79□□□□□ -0.68
CCL28-201ENST00000361115 NUTM2BA6NNL0 878 aaPredicted RBP10.79□□□□□ -0.68
CCL28-201ENST00000361115 NUTM2EB1AL46 878 aaPredicted RBP10.79□□□□□ -0.68
CCL28-201ENST00000361115 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
CCL28-201ENST00000361115 NUTM2AQ8IVF1 878 aaPredicted RBP10.79□□□□□ -0.68
CCL28-201ENST00000361115 C8orf37Q96NL8 207 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms