RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 CENPHQ9H3R5 247 aa15.83■□□□□ 0.13
SRGAP3-201ENST00000360413 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.13
SRGAP3-201ENST00000360413 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.13
SRGAP3-201ENST00000360413 C22orf23Q9BZE7 217 aa15.83■□□□□ 0.12
SRGAP3-201ENST00000360413 DNAI2Q9GZS0 605 aa15.83■□□□□ 0.12
SRGAP3-201ENST00000360413 PAF1Q8N7H5 531 aa15.83■□□□□ 0.12
SRGAP3-201ENST00000360413 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
SRGAP3-201ENST00000360413 SPC24Q8NBT2 197 aa15.82■□□□□ 0.12
SRGAP3-201ENST00000360413 EVA1CP58658 441 aa15.82■□□□□ 0.12
SRGAP3-201ENST00000360413 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
SRGAP3-201ENST00000360413 STK26Q9P289 416 aa15.82■□□□□ 0.12
SRGAP3-201ENST00000360413 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
SRGAP3-201ENST00000360413 PRDM10Q9NQV6 1147 aa15.81■□□□□ 0.12
SRGAP3-201ENST00000360413 SMC2O95347 1197 aa15.81■□□□□ 0.12
SRGAP3-201ENST00000360413 KIF15Q9NS87 1388 aa15.81■□□□□ 0.12
SRGAP3-201ENST00000360413 MLECQ14165 292 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 SYCP1Q15431 976 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 ZKSCAN2Q63HK3 967 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 C9orf78Q9NZ63 289 aaPredicted RBP15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 HSP90AB4PQ58FF6 505 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 AAMPQ13685 434 aa15.8■□□□□ 0.12
SRGAP3-201ENST00000360413 FEZ1Q99689 392 aa15.79■□□□□ 0.12
SRGAP3-201ENST00000360413 ZFYVE27Q5T4F4 411 aa15.79■□□□□ 0.12
SRGAP3-201ENST00000360413 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
SRGAP3-201ENST00000360413 GPATCH11Q8N954 259 aa15.79■□□□□ 0.12
SRGAP3-201ENST00000360413 NEFHP12036 1026 aa15.79■□□□□ 0.12
SRGAP3-201ENST00000360413 RABEP1Q15276 862 aa15.79■□□□□ 0.12
SRGAP3-201ENST00000360413 TXLNAP40222 546 aa15.78■□□□□ 0.12
SRGAP3-201ENST00000360413 MYBBP1AQ9BQG0 1328 aaKnown RBP15.78■□□□□ 0.12
SRGAP3-201ENST00000360413 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
SRGAP3-201ENST00000360413 INTS3Q68E01 1043 aaKnown RBP15.78■□□□□ 0.12
SRGAP3-201ENST00000360413 UBE2Q2Q8WVN8 375 aa15.78■□□□□ 0.12
SRGAP3-201ENST00000360413 FOSBP53539 338 aa15.78■□□□□ 0.12
SRGAP3-201ENST00000360413 MBD3O95983 291 aa15.77■□□□□ 0.12
SRGAP3-201ENST00000360413 TEFQ10587 303 aa15.77■□□□□ 0.12
SRGAP3-201ENST00000360413 SART3Q15020 963 aaKnown RBP15.77■□□□□ 0.12
SRGAP3-201ENST00000360413 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
SRGAP3-201ENST00000360413 ERC2O15083 957 aa15.77■□□□□ 0.12
SRGAP3-201ENST00000360413 SEPT7Q16181 437 aaKnown RBP15.77■□□□□ 0.12
SRGAP3-201ENST00000360413 E9PSI1 815 aa15.77■□□□□ 0.11
SRGAP3-201ENST00000360413 NFXL1Q6ZNB6 911 aa15.77■□□□□ 0.11
SRGAP3-201ENST00000360413 CLASRPQ8N2M8 674 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 SDF4Q9BRK5 362 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 ERLIN1O75477 346 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 PDCL2Q8N4E4 241 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 RBM33Q96EV2 1170 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 NINLQ9Y2I6 1382 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 RAD21O60216 631 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 GRPEL1Q9HAV7 217 aa15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 CCAR1Q8IX12 1150 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-201ENST00000360413 RALYLQ86SE5 291 aaKnown RBP15.75■□□□□ 0.11
SRGAP3-201ENST00000360413 GGT6Q6P531 493 aa15.75■□□□□ 0.11
SRGAP3-201ENST00000360413 RAB3GAP2Q9H2M9 1393 aa15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 RBM25P49756 843 aaKnown RBP15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 CBX1P83916 185 aa15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 CGNQ9P2M7 1197 aaKnown RBP15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 ESPNB1AK53 854 aa15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
SRGAP3-201ENST00000360413 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
SRGAP3-201ENST00000360413 FAM193AP78312 1265 aa15.73■□□□□ 0.11
SRGAP3-201ENST00000360413 CALCOCO1Q9P1Z2 691 aa15.73■□□□□ 0.11
SRGAP3-201ENST00000360413 PRPF40AO75400 957 aaKnown RBP15.73■□□□□ 0.11
SRGAP3-201ENST00000360413 GBP2P32456 591 aaPredicted RBP15.72■□□□□ 0.11
SRGAP3-201ENST00000360413 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
SRGAP3-201ENST00000360413 PDCP20941 246 aa15.72■□□□□ 0.11
SRGAP3-201ENST00000360413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.72■□□□□ 0.11
SRGAP3-201ENST00000360413 TICAM2Q86XR7 235 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 PSMA5P28066 241 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 FILIP1LQ4L180 1135 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 CCDC102AQ96A19 550 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 PKD2Q13563 968 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 COG3Q96JB2 828 aa15.71■□□□□ 0.11
SRGAP3-201ENST00000360413 NUP155O75694 1391 aa15.71■□□□□ 0.1
SRGAP3-201ENST00000360413 MAGEC2Q9UBF1 373 aaPredicted RBP15.71■□□□□ 0.1
SRGAP3-201ENST00000360413 MSH5O43196 834 aa15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 IPO4Q8TEX9 1081 aaKnown RBP15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 ZMYND15Q9H091 742 aa15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 ANKRD62A6NC57 917 aa15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 G3BP1Q13283 466 aaKnown RBP eCLIP15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 TMEM132AQ24JP5 1023 aa15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 ZNHIT6Q9NWK9 470 aaKnown RBP15.7■□□□□ 0.1
SRGAP3-201ENST00000360413 EVC2Q86UK5 1308 aa15.69■□□□□ 0.1
SRGAP3-201ENST00000360413 FMNL2Q96PY5 1086 aa15.69■□□□□ 0.1
SRGAP3-201ENST00000360413 PDCL3Q9H2J4 239 aa15.69■□□□□ 0.1
SRGAP3-201ENST00000360413 ZHX1Q9UKY1 873 aaPredicted RBP15.69■□□□□ 0.1
SRGAP3-201ENST00000360413 TAX1BP1Q86VP1 789 aa15.69■□□□□ 0.1
SRGAP3-201ENST00000360413 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
SRGAP3-201ENST00000360413 DDX11Q96FC9 970 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms