RNA–Protein interactions for RNA: ENST00000359574.7

LFNG-203, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LFNG, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-203ENST00000359574 PNPLA6Q8IY17 1366 aa41.17■■■■■ 4.18
LFNG-203ENST00000359574 PLEKHH1Q9ULM0 1364 aa41.16■■■■■ 4.18
LFNG-203ENST00000359574 NRXN1Q9ULB1 1477 aa41.16■■■■■ 4.18
LFNG-203ENST00000359574 MYOM2P54296 1465 aa41.14■■■■■ 4.18
LFNG-203ENST00000359574 CDC42BPGQ6DT37 1551 aa41.14■■■■■ 4.18
LFNG-203ENST00000359574 YTHDC2Q9H6S0 1430 aaKnown RBP41.14■■■■■ 4.18
LFNG-203ENST00000359574 C14orf93Q9H972 538 aaKnown RBP41.14■■■■■ 4.18
LFNG-203ENST00000359574 ZNF772Q68DY9 489 aaPredicted RBP41.12■■■■■ 4.17
LFNG-203ENST00000359574 SOS2Q07890 1332 aaPredicted RBP41.12■■■■■ 4.17
LFNG-203ENST00000359574 LAMC1P11047 1609 aa41.11■■■■■ 4.17
LFNG-203ENST00000359574 CFAP70Q5T0N1 1121 aa41.11■■■■■ 4.17
LFNG-203ENST00000359574 ESCO1Q5FWF5 840 aa41.08■■■■■ 4.17
LFNG-203ENST00000359574 HRCP23327 699 aa41.07■■■■■ 4.16
LFNG-203ENST00000359574 KNDC1Q76NI1 1749 aa41.06■■■■■ 4.16
LFNG-203ENST00000359574 NUTM2FA1L443 756 aa41.03■■■■■ 4.16
LFNG-203ENST00000359574 AFF2P51816 1311 aa41.02■■■■■ 4.16
LFNG-203ENST00000359574 SIRT1Q96EB6 747 aa41.01■■■■■ 4.16
LFNG-203ENST00000359574 DHX57Q6P158 1386 aaKnown RBP41.01■■■■■ 4.15
LFNG-203ENST00000359574 C8orf37Q96NL8 207 aa40.99■■■■■ 4.15
LFNG-203ENST00000359574 NPHP3Q7Z494 1330 aa40.98■■■■■ 4.15
LFNG-203ENST00000359574 FOXO3O43524 673 aa40.96■■■■■ 4.15
LFNG-203ENST00000359574 ADAMTS2O95450 1211 aa40.93■■■■■ 4.14
LFNG-203ENST00000359574 XPCQ01831 940 aaPredicted RBP40.93■■■■■ 4.14
LFNG-203ENST00000359574 PXDNQ92626 1479 aa40.93■■■■■ 4.14
LFNG-203ENST00000359574 PRAM1Q96QH2 718 aa40.92■■■■■ 4.14
LFNG-203ENST00000359574 KDM2AQ9Y2K7 1162 aa40.92■■■■■ 4.14
LFNG-203ENST00000359574 DCAF11Q8TEB1 546 aa40.91■■■■■ 4.14
LFNG-203ENST00000359574 RXRBP28702 533 aa40.9■■■■■ 4.14
LFNG-203ENST00000359574 SAFB2Q14151 953 aaKnown RBP eCLIP40.89■■■■■ 4.14
LFNG-203ENST00000359574 FMN2Q9NZ56 1722 aa40.87■■■■■ 4.13
LFNG-203ENST00000359574 ADGRB1O14514 1584 aa40.87■■■■■ 4.13
LFNG-203ENST00000359574 NGLY1Q96IV0 654 aa40.85■■■■■ 4.13
LFNG-203ENST00000359574 DLC1Q96QB1 1528 aa40.83■■■■■ 4.13
LFNG-203ENST00000359574 POGKQ9P215 609 aa40.81■■■■■ 4.12
LFNG-203ENST00000359574 COL22A1Q8NFW1 1626 aaPredicted RBP40.8■■■■■ 4.12
LFNG-203ENST00000359574 QTRT2Q9H974 415 aaKnown RBP40.8■■■■■ 4.12
LFNG-203ENST00000359574 STAC3Q96MF2 364 aa40.79■■■■■ 4.12
LFNG-203ENST00000359574 TRAK1Q9UPV9 953 aa40.79■■■■■ 4.12
LFNG-203ENST00000359574 CDK12Q9NYV4 1490 aaPredicted RBP40.77■■■■■ 4.12
LFNG-203ENST00000359574 PHF8Q9UPP1 1060 aa40.74■■■■■ 4.11
LFNG-203ENST00000359574 KIF1AQ12756 1690 aa40.73■■■■■ 4.11
LFNG-203ENST00000359574 RBM6P78332 1123 aaKnown RBP40.72■■■■■ 4.11
LFNG-203ENST00000359574 KRT28Q7Z3Y7 464 aa40.72■■■■■ 4.11
LFNG-203ENST00000359574 SPATA31A3Q5VYP0 1347 aa40.71■■■■■ 4.11
LFNG-203ENST00000359574 FNBP4Q8N3X1 1017 aaPredicted RBP40.7■■■■■ 4.11
LFNG-203ENST00000359574 HIRIP3Q9BW71 556 aaPredicted RBP40.7■■■■■ 4.11
LFNG-203ENST00000359574 USP21Q9UK80 565 aa40.7■■■■■ 4.11
LFNG-203ENST00000359574 RGS12O14924 1447 aa40.67■■■■■ 4.1
LFNG-203ENST00000359574 ADGRB2O60241 1585 aa40.66■■■■■ 4.1
LFNG-203ENST00000359574 MINK1Q8N4C8 1332 aaPredicted RBP40.66■■■■■ 4.1
LFNG-203ENST00000359574 ANKARQ7Z5J8 1434 aa40.65■■■■■ 4.1
LFNG-203ENST00000359574 UPF1Q92900 1129 aaKnown RBP eCLIP40.64■■■■■ 4.1
LFNG-203ENST00000359574 RGPD8O14715 1765 aaPredicted RBP40.61■■■■■ 4.09
LFNG-203ENST00000359574 PSME1Q06323 249 aa40.61■■■■■ 4.09
LFNG-203ENST00000359574 TRPC5Q9UL62 973 aaPredicted RBP40.61■■■■■ 4.09
LFNG-203ENST00000359574 USP32Q8NFA0 1604 aa40.6■■■■■ 4.09
LFNG-203ENST00000359574 PMFBP1Q8TBY8 1022 aa40.6■■■■■ 4.09
LFNG-203ENST00000359574 TNS3Q68CZ2 1445 aa40.6■■■■■ 4.09
LFNG-203ENST00000359574 ATRNO75882 1429 aa40.58■■■■■ 4.09
LFNG-203ENST00000359574 BCL9LQ86UU0 1499 aa40.57■■■■■ 4.08
LFNG-203ENST00000359574 PRR36Q9H6K5 1346 aa40.56■■■■■ 4.08
LFNG-203ENST00000359574 SBNO1A3KN83 1393 aa40.56■■■■■ 4.08
LFNG-203ENST00000359574 WASLO00401 505 aaPredicted RBP40.55■■■■■ 4.08
LFNG-203ENST00000359574 EIF3AQ14152 1382 aaKnown RBP40.52■■■■■ 4.08
LFNG-203ENST00000359574 TULP4Q9NRJ4 1543 aa40.52■■■■■ 4.08
LFNG-203ENST00000359574 LMOD2Q6P5Q4 547 aa40.5■■■■■ 4.07
LFNG-203ENST00000359574 CABLES1Q8TDN4 633 aa40.5■■■■■ 4.07
LFNG-203ENST00000359574 PLEKHG5O94827 1062 aa40.48■■■■■ 4.07
LFNG-203ENST00000359574 ARHGEF10O15013 1369 aa40.47■■■■■ 4.07
LFNG-203ENST00000359574 ARHGEF28Q8N1W1 1705 aaKnown RBP40.46■■■■■ 4.07
LFNG-203ENST00000359574 MARF1Q9Y4F3 1742 aaKnown RBP40.46■■■■■ 4.07
LFNG-203ENST00000359574 HAP1P54257 671 aaPredicted RBP40.45■■■■■ 4.07
LFNG-203ENST00000359574 NBPF1Q3BBV0 1214 aa40.44■■■■■ 4.06
LFNG-203ENST00000359574 SLIT2O94813 1529 aa40.44■■■■■ 4.06
LFNG-203ENST00000359574 UNC5CLQ8IV45 518 aa40.42■■■■■ 4.06
LFNG-203ENST00000359574 GPRASP1Q5JY77 1395 aa40.41■■■■■ 4.06
LFNG-203ENST00000359574 GJD4Q96KN9 370 aaPredicted RBP40.39■■■■■ 4.06
LFNG-203ENST00000359574 ATP7BP35670 1465 aa40.37■■■■■ 4.05
LFNG-203ENST00000359574 NGDNQ8NEJ9 315 aaKnown RBP40.37■■■■■ 4.05
LFNG-203ENST00000359574 KIAA1210Q9ULL0 1709 aa40.37■■■■■ 4.05
LFNG-203ENST00000359574 NUDT16Q96DE0 195 aaKnown RBP40.36■■■■■ 4.05
LFNG-203ENST00000359574 TRPM3Q9HCF6 1732 aaPredicted RBP40.35■■■■■ 4.05
LFNG-203ENST00000359574 CDK19Q9BWU1 502 aa40.35■■■■■ 4.05
LFNG-203ENST00000359574 L3MBTL2Q969R5 705 aa40.33■■■■■ 4.05
LFNG-203ENST00000359574 ATAD2Q6PL18 1390 aa40.33■■■■■ 4.05
LFNG-203ENST00000359574 SIN3AQ96ST3 1273 aa40.32■■■■■ 4.04
LFNG-203ENST00000359574 RALGAPBQ86X10 1494 aa40.31■■■■■ 4.04
LFNG-203ENST00000359574 TNKS1BP1Q9C0C2 1729 aaKnown RBP40.31■■■■■ 4.04
LFNG-203ENST00000359574 ABCA3Q99758 1704 aa40.29■■■■■ 4.04
LFNG-203ENST00000359574 FAM83GA6ND36 823 aa40.28■■■■■ 4.04
LFNG-203ENST00000359574 PAK3O75914 559 aaPredicted RBP40.26■■■■■ 4.04
LFNG-203ENST00000359574 ALS2Q96Q42 1657 aa40.26■■■■■ 4.04
LFNG-203ENST00000359574 GLI3P10071 1580 aa40.25■■■■■ 4.03
LFNG-203ENST00000359574 VPS72Q15906 364 aa40.23■■■■■ 4.03
LFNG-203ENST00000359574 NEUROD1Q13562 356 aa40.22■■■■■ 4.03
LFNG-203ENST00000359574 CENPJQ9HC77 1338 aaPredicted RBP40.22■■■■■ 4.03
LFNG-203ENST00000359574 CCDC61Q9Y6R9 512 aa40.21■■■■■ 4.03
LFNG-203ENST00000359574 ITSN1Q15811 1721 aa40.19■■■■■ 4.02
LFNG-203ENST00000359574 PLCH1Q4KWH8 1693 aa40.19■■■■■ 4.02
LFNG-203ENST00000359574 POLR3AO14802 1390 aaPredicted RBP40.19■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms