RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 NOS1P29475 1434 aa19.24■□□□□ 0.67
UBAP1-202ENST00000359544 STRCQ7RTU9 1775 aa19.24■□□□□ 0.67
UBAP1-202ENST00000359544 RRAGDQ9NQL2 400 aaPredicted RBP19.24■□□□□ 0.67
UBAP1-202ENST00000359544 BECN1Q14457 450 aa19.23■□□□□ 0.67
UBAP1-202ENST00000359544 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
UBAP1-202ENST00000359544 ZNF142P52746 1687 aaPredicted RBP19.23■□□□□ 0.67
UBAP1-202ENST00000359544 POGKQ9P215 609 aa19.22■□□□□ 0.67
UBAP1-202ENST00000359544 NUTM2DQ5VT03 806 aaPredicted RBP19.22■□□□□ 0.67
UBAP1-202ENST00000359544 PER1O15534 1290 aaPredicted RBP19.21■□□□□ 0.67
UBAP1-202ENST00000359544 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
UBAP1-202ENST00000359544 PIK3C2BO00750 1634 aa19.21■□□□□ 0.67
UBAP1-202ENST00000359544 RGS3P49796 1198 aa19.2■□□□□ 0.66
UBAP1-202ENST00000359544 EIF3AQ14152 1382 aaKnown RBP19.2■□□□□ 0.66
UBAP1-202ENST00000359544 LTKP29376 864 aa19.19■□□□□ 0.66
UBAP1-202ENST00000359544 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
UBAP1-202ENST00000359544 DUSP27Q5VZP5 1158 aa19.16■□□□□ 0.66
UBAP1-202ENST00000359544 ANKLE2Q86XL3 938 aa19.16■□□□□ 0.66
UBAP1-202ENST00000359544 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
UBAP1-202ENST00000359544 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
UBAP1-202ENST00000359544 PLA2R1Q13018 1463 aa19.15■□□□□ 0.66
UBAP1-202ENST00000359544 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
UBAP1-202ENST00000359544 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
UBAP1-202ENST00000359544 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.66
UBAP1-202ENST00000359544 RRP9O43818 475 aaKnown RBP19.14■□□□□ 0.65
UBAP1-202ENST00000359544 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
UBAP1-202ENST00000359544 USP19O94966 1318 aa19.13■□□□□ 0.65
UBAP1-202ENST00000359544 CLCN1P35523 988 aa19.13■□□□□ 0.65
UBAP1-202ENST00000359544 NAP1L5Q96NT1 182 aaPredicted RBP19.13■□□□□ 0.65
UBAP1-202ENST00000359544 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
UBAP1-202ENST00000359544 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
UBAP1-202ENST00000359544 MAPK8IP3Q9UPT6 1336 aa19.12■□□□□ 0.65
UBAP1-202ENST00000359544 GOLGA6L3A6NEY3 463 aa19.11■□□□□ 0.65
UBAP1-202ENST00000359544 LAMC1P11047 1609 aa19.11■□□□□ 0.65
UBAP1-202ENST00000359544 TMEM2Q9UHN6 1383 aa19.11■□□□□ 0.65
UBAP1-202ENST00000359544 HSP90AA2PQ14568 343 aaPredicted RBP19.11■□□□□ 0.65
UBAP1-202ENST00000359544 PTPRTO14522 1441 aa19.11■□□□□ 0.65
UBAP1-202ENST00000359544 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
UBAP1-202ENST00000359544 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
UBAP1-202ENST00000359544 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
UBAP1-202ENST00000359544 SPHKAPQ2M3C7 1700 aa19.1■□□□□ 0.65
UBAP1-202ENST00000359544 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
UBAP1-202ENST00000359544 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
UBAP1-202ENST00000359544 ZNF521Q96K83 1311 aa19.09■□□□□ 0.65
UBAP1-202ENST00000359544 ADGRB3O60242 1522 aa19.09■□□□□ 0.65
UBAP1-202ENST00000359544 PRAG1Q86YV5 1406 aa19.09■□□□□ 0.65
UBAP1-202ENST00000359544 VSIG10Q8N0Z9 540 aa19.09■□□□□ 0.65
UBAP1-202ENST00000359544 ADAMTS8Q9UP79 889 aa19.09■□□□□ 0.65
UBAP1-202ENST00000359544 CLTCL1P53675 1640 aa19.08■□□□□ 0.65
UBAP1-202ENST00000359544 SLKQ9H2G2 1235 aaPredicted RBP19.08■□□□□ 0.65
UBAP1-202ENST00000359544 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.64
UBAP1-202ENST00000359544 ANTXR1Q9H6X2 564 aa19.08■□□□□ 0.64
UBAP1-202ENST00000359544 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
UBAP1-202ENST00000359544 FSD2A1L4K1 749 aa19.07■□□□□ 0.64
UBAP1-202ENST00000359544 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
UBAP1-202ENST00000359544 EID1Q9Y6B2 187 aa19.07■□□□□ 0.64
UBAP1-202ENST00000359544 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
UBAP1-202ENST00000359544 NPHP4O75161 1426 aaPredicted RBP19.07■□□□□ 0.64
UBAP1-202ENST00000359544 XRCC6P12956 609 aaKnown RBP eCLIP19.06■□□□□ 0.64
UBAP1-202ENST00000359544 RGL3Q3MIN7 710 aa19.06■□□□□ 0.64
UBAP1-202ENST00000359544 ZMYND15Q9H091 742 aa19.06■□□□□ 0.64
UBAP1-202ENST00000359544 PANK3Q9H999 370 aa19.06■□□□□ 0.64
UBAP1-202ENST00000359544 SCAF11Q99590 1463 aaKnown RBP19.06■□□□□ 0.64
UBAP1-202ENST00000359544 TRPM2O94759 1503 aa19.05■□□□□ 0.64
UBAP1-202ENST00000359544 ARHGAP23Q9P227 1491 aa19.05■□□□□ 0.64
UBAP1-202ENST00000359544 UPF2Q9HAU5 1272 aaKnown RBP19.05■□□□□ 0.64
UBAP1-202ENST00000359544 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
UBAP1-202ENST00000359544 SLIT1O75093 1534 aa19.04■□□□□ 0.64
UBAP1-202ENST00000359544 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
UBAP1-202ENST00000359544 NKTRP30414 1462 aaKnown RBP19.03■□□□□ 0.64
UBAP1-202ENST00000359544 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
UBAP1-202ENST00000359544 NINLQ9Y2I6 1382 aa19.03■□□□□ 0.64
UBAP1-202ENST00000359544 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
UBAP1-202ENST00000359544 TRMT2AQ8IZ69 625 aaKnown RBP19.01■□□□□ 0.63
UBAP1-202ENST00000359544 ZFYVE9O95405 1425 aa19.01■□□□□ 0.63
UBAP1-202ENST00000359544 TMF1P82094 1093 aa19.01■□□□□ 0.63
UBAP1-202ENST00000359544 TESK2Q96S53 571 aa19■□□□□ 0.63
UBAP1-202ENST00000359544 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
UBAP1-202ENST00000359544 SEC24BO95487 1268 aa19■□□□□ 0.63
UBAP1-202ENST00000359544 MRE11P49959 708 aa19■□□□□ 0.63
UBAP1-202ENST00000359544 IQGAP1P46940 1657 aa18.99■□□□□ 0.63
UBAP1-202ENST00000359544 IGHDP01880 384 aa18.99■□□□□ 0.63
UBAP1-202ENST00000359544 MED14O60244 1454 aa18.99■□□□□ 0.63
UBAP1-202ENST00000359544 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
UBAP1-202ENST00000359544 MCM4P33991 863 aa18.98■□□□□ 0.63
UBAP1-202ENST00000359544 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
UBAP1-202ENST00000359544 TBC1D32Q96NH3 1257 aa18.98■□□□□ 0.63
UBAP1-202ENST00000359544 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
UBAP1-202ENST00000359544 PPP2R1AP30153 589 aa18.97■□□□□ 0.63
UBAP1-202ENST00000359544 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
UBAP1-202ENST00000359544 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
UBAP1-202ENST00000359544 KDM5AP29375 1690 aaKnown RBP18.96■□□□□ 0.63
UBAP1-202ENST00000359544 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
UBAP1-202ENST00000359544 ARXQ96QS3 562 aa18.96■□□□□ 0.63
UBAP1-202ENST00000359544 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
UBAP1-202ENST00000359544 PANK2Q9BZ23 570 aa18.95■□□□□ 0.62
UBAP1-202ENST00000359544 E9PSI1 815 aa18.94■□□□□ 0.62
UBAP1-202ENST00000359544 AAMPQ13685 434 aa18.94■□□□□ 0.62
UBAP1-202ENST00000359544 PIK3C2GO75747 1445 aa18.94■□□□□ 0.62
UBAP1-202ENST00000359544 LTBP4Q8N2S1 1624 aa18.94■□□□□ 0.62
UBAP1-202ENST00000359544 KIF1BO60333 1816 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms